DY271083

Overview
NameDY271083
Unique NameDY271083
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1155
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: BETB_BURVG (Betaine aldehyde dehydrogenase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=betB PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.101e-15
Identity = 55/213 (25.82%), Postives = 96/213 (45.07%), Query Frame = 2 
Query:  218 GPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAKTKDPRIFLVSFYG 853
            G T  + +PA  + +A V +AS  D +  + +  +  + W  L A +R  ++R+  D LRE+   L  + + + GK + E +  ++    D+ ++  GL+  + G  +P  R    +     PLGV   I A+N+P  +  W    AL  GN +V+K               ++E++    +P  +F    G   +G   T  P I  VSF G
Sbjct:   21 GKTFDTFDPATGELLAQVQQASAADVDRAVASAQQGQREWAALTAMQRSRILRRAVDLLRERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPL-RAESFVYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTALK----LAEIYTEAGVPAGVFNVVQGDGSVGALLTGHPDIAKVSFTG 228
[Close]
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: BETB_BURCM (Betaine aldehyde dehydrogenase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=betB PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.101e-15
Identity = 55/213 (25.82%), Postives = 96/213 (45.07%), Query Frame = 2 
Query:  218 GPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAKTKDPRIFLVSFYG 853
            G T  + +PA  + +A V +AS  D +  + +  E  + W  + A +R  ++R+  D LRE+   L  + + + GK + E +  ++    D+ ++  GL+  + G  +P  R    +     PLGV   I A+N+P  +  W    AL  GN +V+K               ++E++    +P  +F    G   +G   T  P I  VSF G
Sbjct:   21 GKTFDTFDPATGELLAQVQQASAADVDRAVASAREGQREWAAMTAMQRSRILRRAVDLLRERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPL-RAESFVYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTALK----LAEIYTEAGVPAGVFNVVQGDGSVGALLTGHPDIAKVSFTG 228
[Close]
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: BETB_BURA4 (Betaine aldehyde dehydrogenase OS=Burkholderia ambifaria (strain MC40-6) GN=betB PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.101e-15
Identity = 55/213 (25.82%), Postives = 96/213 (45.07%), Query Frame = 2 
Query:  218 GPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAKTKDPRIFLVSFYG 853
            G T  + +PA  + +A V +AS  D +  + +  E  + W  + A +R  ++R+  D LRE+   L  + + + GK + E +  ++    D+ ++  GL+  + G  +P  R    +     PLGV   I A+N+P  +  W    AL  GN +V+K               ++E++    +P  +F    G   +G   T  P I  VSF G
Sbjct:   21 GKTFDTFDPATGELLAQVQQASAADVDRAVASAREGQREWAAMTAMQRSRILRRAVDLLRERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPL-RAESFVYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTALK----LAEIYTEAGVPAGVFNVVQGDGSVGALLTGHPDIAKVSFTG 228
[Close]
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: ABDH_ECOSE (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli (strain SE11) GN=ydcW PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.101e-15
Identity = 57/206 (27.67%), Postives = 84/206 (40.78%), Query Frame = 2 
Query:  239 NPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAKTKDPRIFLVSFYG 853
            NPA    +  + EAS E  +  ++A   A   W +     R E + ++ D + E       L S   GK L      E+  ++D+  F  G +R LNG         H  +   +PLGVV  I  +N+P  +  W    AL  GNCVV K             +L  ++F      G I   F  G  +G   T  P++ +VS  G
Sbjct:   23 NPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDIFP----AGVINVLFGRGKTVGDPLTGHPKVRMVSLTG 224
[Close]
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: ABDH_ECO8A (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli O8 (strain IAI1) GN=ydcW PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.101e-15
Identity = 57/206 (27.67%), Postives = 84/206 (40.78%), Query Frame = 2 
Query:  239 NPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAKTKDPRIFLVSFYG 853
            NPA    +  + EAS E  +  ++A   A   W +     R E + ++ D + E       L S   GK L      E+  ++D+  F  G +R LNG         H  +   +PLGVV  I  +N+P  +  W    AL  GNCVV K             +L  ++F      G I   F  G  +G   T  P++ +VS  G
Sbjct:   23 NPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDIFP----AGVINVLFGRGKTVGDPLTGHPKVRMVSLTG 224
[Close]
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: ABDH_ECO5E (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=ydcW PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.101e-15
Identity = 57/206 (27.67%), Postives = 84/206 (40.78%), Query Frame = 2 
Query:  239 NPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAKTKDPRIFLVSFYG 853
            NPA    +  + EAS E  +  ++A   A   W +     R E + ++ D + E       L S   GK L      E+  ++D+  F  G +R LNG         H  +   +PLGVV  I  +N+P  +  W    AL  GNCVV K             +L  ++F      G I   F  G  +G   T  P++ +VS  G
Sbjct:   23 NPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDIFP----AGVINVLFGRGKTVGDPLTGHPKVRMVSLTG 224
[Close]
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: ABDH_ECO57 (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli O157:H7 GN=ydcW PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.101e-15
Identity = 57/206 (27.67%), Postives = 84/206 (40.78%), Query Frame = 2 
Query:  239 NPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAKTKDPRIFLVSFYG 853
            NPA    +  + EAS E  +  ++A   A   W +     R E + ++ D + E       L S   GK L      E+  ++D+  F  G +R LNG         H  +   +PLGVV  I  +N+P  +  W    AL  GNCVV K             +L  ++F      G I   F  G  +G   T  P++ +VS  G
Sbjct:   23 NPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDIFP----AGVINVLFGRGKTVGDPLTGHPKVRMVSLTG 224
[Close]
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: ABDH_ECO24 (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=ydcW PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.101e-15
Identity = 57/206 (27.67%), Postives = 84/206 (40.78%), Query Frame = 2 
Query:  239 NPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAKTKDPRIFLVSFYG 853
            NPA    +  + EAS E  +  ++A   A   W +     R E + ++ D + E       L S   GK L      E+  ++D+  F  G +R LNG         H  +   +PLGVV  I  +N+P  +  W    AL  GNCVV K             +L  ++F      G I   F  G  +G   T  P++ +VS  G
Sbjct:   23 NPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDIFP----AGVINVLFGRGKTVGDPLTGHPKVRMVSLTG 224
[Close]
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: BETB_BURPS (Betaine aldehyde dehydrogenase OS=Burkholderia pseudomallei GN=betB PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.437e-15
Identity = 54/213 (25.35%), Postives = 97/213 (45.54%), Query Frame = 2 
Query:  218 GPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAKTKDPRIFLVSFYG 853
            G T  + +PA  + +A V +AS +D +  + +  E  + W  + A +R  ++R+  + LRE+   L  L   + GK + E    ++    D+ ++  GL+  + G  +P  RP   +     PLGV   I A+N+P  +  W +  AL  GN +++K               ++E++    +P  +F    G   +G   +  P I  VSF G
Sbjct:   21 GKTFDTFDPATGELLARVQQASADDVDRAVASAREGQREWAAMTAMQRSRILRRAVELLRERNDALAELEMRDTGKPIAETRAVDIVTGADVIEYYAGLATAIEGLQVPL-RPESFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLSALK----LAEIYTEAGVPAGVFNVVQGDGSVGALLSAHPGIAKVSFTG 228
[Close]
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: BETB_BURP1 (Betaine aldehyde dehydrogenase OS=Burkholderia pseudomallei (strain 1710b) GN=betB PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.437e-15
Identity = 54/213 (25.35%), Postives = 97/213 (45.54%), Query Frame = 2 
Query:  218 GPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAKTKDPRIFLVSFYG 853
            G T  + +PA  + +A V +AS +D +  + +  E  + W  + A +R  ++R+  + LRE+   L  L   + GK + E    ++    D+ ++  GL+  + G  +P  RP   +     PLGV   I A+N+P  +  W +  AL  GN +++K               ++E++    +P  +F    G   +G   +  P I  VSF G
Sbjct:   21 GKTFDTFDPATGELLARVQQASADDVDRAVASAREGQREWAAMTAMQRSRILRRAVELLRERNDALAELEMRDTGKPIAETRAVDIVTGADVIEYYAGLATAIEGLQVPL-RPESFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLSALK----LAEIYTEAGVPAGVFNVVQGDGSVGALLSAHPGIAKVSFTG 228
The following BLAST results are available for this feature:
BLAST of DY271083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 377
Match NameE-valueIdentityDescription
BETB_BURVG1.101e-1525.82Betaine aldehyde dehydrogenase OS=Burkholderia vie... [more]
BETB_BURCM1.101e-1525.82Betaine aldehyde dehydrogenase OS=Burkholderia amb... [more]
BETB_BURA41.101e-1525.82Betaine aldehyde dehydrogenase OS=Burkholderia amb... [more]
ABDH_ECOSE1.101e-1527.67Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECO8A1.101e-1527.67Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECO5E1.101e-1527.67Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECO571.101e-1527.67Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECO241.101e-1527.67Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
BETB_BURPS1.437e-1525.35Betaine aldehyde dehydrogenase OS=Burkholderia pse... [more]
BETB_BURP11.437e-1525.35Betaine aldehyde dehydrogenase OS=Burkholderia pse... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YM14FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271083 ID=DY271083; Name=DY271083; organism=Citrus clementina; type=EST; length=1155bp
CTAATTCATTCCCACTCACTTTCATGTGACATTGTCTTACATAACTAATC
TTTTTTCAATCCTCAAAGTTCTTACAGTTTCTTTTACATTTCAAATCCAA
TATGGGATGTGACTTGCAGAGATGGAATTTGCAAAGCAAGAGTACGAGTT
TCTGAGTGAGATCGGCTTAAGTCCAGAAACTCCTGGATGTTTTGTGAATG
GCAAGTGGAAGGCACATGGTCCTACTGTCTCCTCTATCAATCCTGCTAAC
AATCAGAAAATTGCTACTGTTGTGGAGGCTTCACTTGAGGATTATGAGGA
AGGCATGAAAGCTTGCAGCGAAGCATCTAAGATATGGATGGAACTTCCAG
CTCCTAAGAGAGGGGAGGTTGTTAGACAAATAGGTGATGCATTGAGAGAA
AAACTGCATCATCTCGGCCGTCTTCTTTCAATTGAGATGGGAAAAATTCT
TCCAGAAGGAATTGGGGAAGTCCAAGAAGTTATTGACATGTGTGATTTTG
CTGTGGGTTTAAGCCGGCAACTTAATGGATCAGTAATACCTTCAGAACGT
CCCAATCATATGATGTTAGAGACATGGAATCCTCTTGGGGTAGTTGGTGT
CATTACAGCATTTAACTTCCCGTGTGCTGTTCTTGGATGGAATGCATGCA
TTGCACTAGTCTGCGGCAACTGTGTTGTTTGGAAAGGTGCTCCAACAACT
CCTTTGATCACCATAGCAATAACAAAGCTGGTGTCTGAGGTTTTCGAGAG
GAACAAGTTACCTGGTGCAATTTTTACCTCTTTTTGTGGGGGGGCTGAAA
TAGGTCAAGCAAAAACAAAAGATCCACGTATTTTTCTGGTTTCATTTTAT
GGGATAACAAGGTGGGGTTTAAGGTGCCAAAAACAATGCCCTCAAAAATT
GGTAAAGTTTTACTTGAATTAAATTGGAAAACAAGCAATTAATTTTTAAG
GGATAATGCCAAAATACAAAAAAACTGTTTCCTTTCTGTCCCATTTTCCG
GGGGGTCGGAAAAAGCGGGGCCAGCCCTGGCCCAACTTTTTTTTTAAAAA
GGGCCTTTTTCCCCAAAAACCAATTACACAAAAAACTGGGCCTTTTAATC
ACACCAATATTAGTGGGTTAACAAAAATAATTATTAAAAAAATAGAAAAA
ACTTT
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