DY271083

Overview
NameDY271083
Unique NameDY271083
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1155
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: BETB_VIBSL (Betaine aldehyde dehydrogenase OS=Vibrio splendidus (strain LGP32) GN=betB PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.064e-18
Identity = 67/234 (28.63%), Postives = 105/234 (44.87%), Query Frame = 2
Query:  176 ETPGCFVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAKTKDPRIFLVSFYGITRWG 868
            E    +++GK      G T  SINPAN + IAT+ +AS  D E  +++      +W  + A +R  ++ +  + LR + + L  L  ++ GK L E I  +V    D+ ++  GL+  L G   P             PLG+   I A+N+P  +  W +  AL  GN +++K               ++E+F    LP  +F    G   +GQ  T  P I  VSF G T  G
Sbjct:    2 EMNSLYIDGKAVDATSGETFVSINPANGEPIATLGQASSADVENAIESAKRGFAVWSAMTAVERSRILLKAVEILRARNNDLANLEVVDTGKPLQEAIEVDVASGADVIEYFAGLAPTLQGDQQPLS-DTQFFYTRREPLGICAGIGAWNYPIQIAMWKSAPALAAGNAMIFKPSEETPLTALK----LAEIFTEAGLPDGVFNVVQGDYRVGQMLTAHPDIAKVSFTGETGTG 230          
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: BETB_PSEE4 (Betaine aldehyde dehydrogenase OS=Pseudomonas entomophila (strain L48) GN=betB PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.064e-18
Identity = 68/247 (27.53%), Postives = 113/247 (45.75%), Query Frame = 2
Query:  179 TPGCFVNGKWKAHGP--TVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAKTKDPRIFLVSFYGITRWGLRCQKQCPQKLVK 907
            T   +++G +   G   T  +INPA  + +A V  A+  D E+ +++     K+W  + A +R  ++R+  D LRE+   L  L +++ GK   E    ++    D+ ++  GL   + G  IP  R +  +     PLGV   I A+N+P  +  W +  AL  GN +++K               ++E+F    LP  +F    G G E+G   T+ PRI  VSF G T  G +         +K
Sbjct:    6 TQKLYIDGAYVDAGSDATFEAINPATGEVLAHVQRATQADVEKAVESAERGQKVWAAMTAMQRSRILRRAVDILRERNDELAMLETLDTGKSYSETRYVDIVTGADVLEYYAGLVPAIEGEQIPL-RESSFVYTRREPLGVTVGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTSLTTLK----LAEIFTEAGLPNGVFNVLTGSGREVGTWLTEHPRIEKVSFTGGTTTGKKVMASASSSSLK 247          
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: LADH_META3 (Lactaldehyde dehydrogenase OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=Maeo_1030 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.389e-18
Identity = 65/243 (26.75%), Postives = 108/243 (44.44%), Query Frame = 2
Query:  191 FVNGKWKAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAKTKDPRIFLVSFYGITRWGLRCQKQCPQKLVKFYL 916
            F+NG+W  +   +   NP NN+ I  +   S  + +E +K   E       L    R  ++ +I   L +    L +L++I++GK + + I EV   I    F+   SR+L G  IP +  + M++    P+G+VG IT FNFP  +       A+  GN +V               K++ +V +  K+P  +F    G G  +G    K+ +I  +SF G    G    K+   K +   L
Sbjct:    2 FINGEW-INRKDIEVKNPYNNEIIGYIPSLSRNETKEAIKIAEEHKSTMKNLSPTIRYNILMKIASELSKNKRELAKLITIDVGKPIKQSIIEVDRTITTFKFSAFYSRELRGETIPFD--DGMVITKREPVGLVGAITPFNFPLNLFAHKIAPAIAMGNSIVAHPSSKAPMITIELTKIIEKVLKSKKIPLGVFNLLTGEGHIVGDEIVKNNKINKLSFTGSVEVGESITKKAGFKKITLEL 241          
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: IOLA_BACCN (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=iolA PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.389e-18
Identity = 65/223 (29.15%), Postives = 105/223 (47.09%), Query Frame = 2
Query:  194 VNGKW-KAHGPTVSSI-NPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWN-PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAKTKDPRIFLVSFYG 853
            +NG+W ++ G  V ++ NPA  + IA V  +  ED E  ++A   A + W ++P P R  ++ +    L+E    L +++++E GK L +  GEVQ  I+  + A      + G  +P+     +    W  PLGVV  IT FNFP  +  W   +A+ CGN  V K             + + E+F     P  +     GG E+  +  ++  I  VSF G
Sbjct:   13 INGEWVESTGTEVEAVPNPATGKIIAYVPLSPKEDVERAVEAAKNAYETWSKVPVPNRSRMLYKYLQLLQENKDELSKIITLENGKTLKDASGEVQRGIEAVELATSAPNLMMGQALPN-IAGGIDGSIWRYPLGVVAGITPFNFPMMIPLWMFPLAIACGNTFVLK----TSERTPLLAERLVELFYEAGFPKGVLNLVQGGKEVVNSILENKEIQAVSFVG 230          
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: IOLA_BACA2 (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus amyloliquefaciens (strain FZB42) GN=iolA PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.389e-18
Identity = 62/223 (27.80%), Postives = 102/223 (45.74%), Query Frame = 2
Query:  191 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAKTKDPRIFLVSFYG 853
            ++NG+W           INPA  + +  V  ++ ED E  +++ SEA + W +   P+R  ++      L++    L RL+++E GK   E +GEV   I+  +FA G    + G  + S   +        P+GVVG I  FNFP  V  W   +A+  GN  + K             + ++E+FE+  LP  +F    G  ++     + P I  +SF G
Sbjct:   10 YINGEWVESKTDQYEDVINPATKEVMCQVPISTREDVEYAVRSASEAFQTWSKTAVPRRARILFNYQQLLQQNKEELARLITLENGKNTTEALGEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAISLGNTFILK----PSERTPLLTEKLAELFEQAGLPKGVFNVVHGAHDVVNGVLEHPDIKAISFVG 228          
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: BETB_XANAC (Betaine aldehyde dehydrogenase OS=Xanthomonas axonopodis pv. citri GN=betB PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.814e-18
Identity = 64/232 (27.59%), Postives = 107/232 (46.12%), Query Frame = 2
Query:  218 GPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAKTKDPRIFLVSFYGITRWGLRCQKQCPQKLVK 907
            G T+  +NPA  + +A V  A ++D +  + +     + W  L   +R  ++ +    LRE+   L +L ++  GK L E    +V    D+ ++  G+++ L G+ +P  R          PLGVVG I A+N+P  +  W A  AL  GN +++K               ++E+F    LP  +F    G GA +G A T+ P+I  +SF G T  G +         +K
Sbjct:   21 GHTLEVVNPATGEVLANVHNAGVDDLDAAVDSAKAGQQRWAALTTVERSRILLRAVALLRERNDALAQLETLNTGKPLSETRSVDVVTGADVLEYYAGVAQALQGAQVPL-REGSFFYTRHEPLGVVGAIGAWNYPIQIALWKAAPALAAGNAMIFKPSEVTPLTALK----LAEIFTEAGLPDGVFNVLPGDGASVGTALTEHPQIEKISFTGGTATGRKVMASASSSSLK 247          
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: BETB_PSEPG (Betaine aldehyde dehydrogenase OS=Pseudomonas putida (strain GB-1) GN=betB PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.814e-18
Identity = 67/247 (27.13%), Postives = 114/247 (46.15%), Query Frame = 2
Query:  179 TPGCFVNGKWKAHGP--TVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAKTKDPRIFLVSFYGITRWGLRCQKQCPQKLVK 907
            T   +++G +   G   T  +INPA  + +A V  A+  D E+ +++     K+W  + A +R  ++R+  D LRE+   L +L +++ GK   E    ++    D+ ++  GL   + G  IP  R +  +     PLGV   I A+N+P  +  W +  AL  GN +++K               ++E++    LP  +F    G G E+G   T+ PRI  VSF G T  G +         +K
Sbjct:    6 TQKLYIDGAYVDAGSDATFEAINPATGEVLAHVQRATEADVEKAVESAERGQKVWAAMTAMQRSRILRRAVDILRERNDELAQLETLDTGKSYSETRYVDIVTGADVLEYYAGLVPAIEGEQIPL-RESSFVYTRREPLGVTVGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTSLTTLK----LAEIYTEAGLPNGVFNVLTGSGREVGTWLTEHPRIEKVSFTGGTTTGKKVMASASSSSLK 247          
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: ABDH_PECCP (Gamma-aminobutyraldehyde dehydrogenase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=PC1_1415 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.814e-18
Identity = 68/251 (27.09%), Postives = 105/251 (41.83%), Query Frame = 2
Query:  194 VNGKWKA-HGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAKTKDPRIFLVSFYGITRWGLRCQKQCPQKLVKFYLN*IGKQAI 940
            + GK  A  G  ++  NPA  ++IA + +A L   +  + A   A   W +     R  ++ QI DA+ E      RL S+  GK     +  EV  V D+  F  G +R L+GS        H  +   +P+GVV  I  +N+P  +  W    AL  GNCVV K              L++E+       G +   F  GA+IG A T   ++ +VS  G    G          + + ++   GK  +
Sbjct:    7 IEGKLVAGKGEALAVFNPATGEQIAAIAQADLHQVDAAVLAAESAFAHWGQTTPKTRATLLLQIADAIEENAEAFARLESLNCGKPYHAALNDEVPAVADVFRFFAGAARCLSGSAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMASWKLAPALAAGNCVVLKPAEQTPLTTFYLAHLLAEILP----AGVVNIVFGRGADIGDALTGHEKVNMVSLTGSIATGAHILSHTASSVKRTHMELGGKAPV 253          
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: BETB_YERPS (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis GN=betB PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 2.369e-18
Identity = 62/225 (27.56%), Postives = 108/225 (48.00%), Query Frame = 2
Query:  191 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAKTKDPRIFLVSFYG 853
            ++NG +     G T  ++NPAN + IA +  A+ +D ++ + A  +   +W  + A +R  ++R+  D LR++   L  + + + GK L E    ++    D+ ++  GL   L G  IP  R +  +     PLGVV  I A+N+P  +  W +  AL  GN +++K               ++ ++    LP  +F    G G ++GQ  T+ P I  VSF G
Sbjct:   10 YINGAYTDSTSGDTFDAVNPANGECIAQLQAANAQDVDKAVAAAKQGQPVWAAMTAMERSRILRRAVDILRDRNDELAAIETADTGKPLSETRSVDIVTGADVLEYYAGLIPALEGQQIPL-RGSAFVYTRREPLGVVAGIGAWNYPLQIALWKSAPALAAGNAMIFKPSEVTSLTALK----LAGIYTEAGLPAGVFNVLTGSGDQVGQMLTEHPGIAKVSFTG 229          
BLAST of DY271083 vs. ExPASy Swiss-Prot
Match: BETB_YERPP (Betaine aldehyde dehydrogenase OS=Yersinia pestis (strain Pestoides F) GN=betB PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 2.369e-18
Identity = 62/225 (27.56%), Postives = 108/225 (48.00%), Query Frame = 2
Query:  191 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAKTKDPRIFLVSFYG 853
            ++NG +     G T  ++NPAN + IA +  A+ +D ++ + A  +   +W  + A +R  ++R+  D LR++   L  + + + GK L E    ++    D+ ++  GL   L G  IP  R +  +     PLGVV  I A+N+P  +  W +  AL  GN +++K               ++ ++    LP  +F    G G ++GQ  T+ P I  VSF G
Sbjct:   10 YINGAYTDSTSGDTFDAVNPANGECIAQLQAANAQDVDKAVAAAKQGQPVWAAMTAMERSRILRRAVDILRDRNDELAAIETADTGKPLSETRSVDIVTGADVLEYYAGLIPALEGQQIPL-RGSAFVYTRREPLGVVAGIGAWNYPLQIALWKSAPALAAGNAMIFKPSEVTSLTALK----LAGIYTEAGLPAGVFNVLTGSGDQVGQMLTEHPGIAKVSFTG 229          
The following BLAST results are available for this feature:
BLAST of DY271083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 377
Match NameE-valueIdentityDescription
BETB_VIBSL1.064e-1828.63Betaine aldehyde dehydrogenase OS=Vibrio splendidu... [more]
BETB_PSEE41.064e-1827.53Betaine aldehyde dehydrogenase OS=Pseudomonas ento... [more]
LADH_META31.389e-1826.75Lactaldehyde dehydrogenase OS=Methanococcus aeolic... [more]
IOLA_BACCN1.389e-1829.15Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA_BACA21.389e-1827.80Methylmalonate semialdehyde dehydrogenase [acylati... [more]
BETB_XANAC1.814e-1827.59Betaine aldehyde dehydrogenase OS=Xanthomonas axon... [more]
BETB_PSEPG1.814e-1827.13Betaine aldehyde dehydrogenase OS=Pseudomonas puti... [more]
ABDH_PECCP1.814e-1827.09Gamma-aminobutyraldehyde dehydrogenase OS=Pectobac... [more]
BETB_YERPS2.369e-1827.56Betaine aldehyde dehydrogenase OS=Yersinia pseudot... [more]
BETB_YERPP2.369e-1827.56Betaine aldehyde dehydrogenase OS=Yersinia pestis ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YM14FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271083 ID=DY271083; Name=DY271083; organism=Citrus clementina; type=EST; length=1155bp
CTAATTCATTCCCACTCACTTTCATGTGACATTGTCTTACATAACTAATC
TTTTTTCAATCCTCAAAGTTCTTACAGTTTCTTTTACATTTCAAATCCAA
TATGGGATGTGACTTGCAGAGATGGAATTTGCAAAGCAAGAGTACGAGTT
TCTGAGTGAGATCGGCTTAAGTCCAGAAACTCCTGGATGTTTTGTGAATG
GCAAGTGGAAGGCACATGGTCCTACTGTCTCCTCTATCAATCCTGCTAAC
AATCAGAAAATTGCTACTGTTGTGGAGGCTTCACTTGAGGATTATGAGGA
AGGCATGAAAGCTTGCAGCGAAGCATCTAAGATATGGATGGAACTTCCAG
CTCCTAAGAGAGGGGAGGTTGTTAGACAAATAGGTGATGCATTGAGAGAA
AAACTGCATCATCTCGGCCGTCTTCTTTCAATTGAGATGGGAAAAATTCT
TCCAGAAGGAATTGGGGAAGTCCAAGAAGTTATTGACATGTGTGATTTTG
CTGTGGGTTTAAGCCGGCAACTTAATGGATCAGTAATACCTTCAGAACGT
CCCAATCATATGATGTTAGAGACATGGAATCCTCTTGGGGTAGTTGGTGT
CATTACAGCATTTAACTTCCCGTGTGCTGTTCTTGGATGGAATGCATGCA
TTGCACTAGTCTGCGGCAACTGTGTTGTTTGGAAAGGTGCTCCAACAACT
CCTTTGATCACCATAGCAATAACAAAGCTGGTGTCTGAGGTTTTCGAGAG
GAACAAGTTACCTGGTGCAATTTTTACCTCTTTTTGTGGGGGGGCTGAAA
TAGGTCAAGCAAAAACAAAAGATCCACGTATTTTTCTGGTTTCATTTTAT
GGGATAACAAGGTGGGGTTTAAGGTGCCAAAAACAATGCCCTCAAAAATT
GGTAAAGTTTTACTTGAATTAAATTGGAAAACAAGCAATTAATTTTTAAG
GGATAATGCCAAAATACAAAAAAACTGTTTCCTTTCTGTCCCATTTTCCG
GGGGGTCGGAAAAAGCGGGGCCAGCCCTGGCCCAACTTTTTTTTTAAAAA
GGGCCTTTTTCCCCAAAAACCAATTACACAAAAAACTGGGCCTTTTAATC
ACACCAATATTAGTGGGTTAACAAAAATAATTATTAAAAAAATAGAAAAA
ACTTT
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