DY271086

Overview
NameDY271086
Unique NameDY271086
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1184
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271086 vs. ExPASy Swiss-Prot
Match: KPYK_STAA8 (Pyruvate kinase OS=Staphylococcus aureus (strain NCTC 8325) GN=pyk PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 7.386e-23
Identity = 70/236 (29.66%), Postives = 126/236 (53.39%), Query Frame = 2
Query:  182 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEV--KGNDVTCVIKNTATLAGSLFTLHASQIRIELPTLSDKNKEVISSWGIPKQIDFLSLSYTRHAENVGQAREYLSNLGGLSQTQIFAKIENKKGL 883
            TKIV T+GP S S ++I   + AGM+VAR +FS G+ E H+  ++ ++   K   K+ A++LDT GPE++  N  +  I L+    V+++ +   E T +   + ++ L   V+ G  I +   L        + L+V ++     +V C I N+  L      ++   +R+ LP +++K+ E I  +GI + +DF++ S+ R   +V + RE L      +   +F KIEN++G+
Sbjct:    4 TKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDGIIELERGNEVIVSMN-EVEGTPEKFSVTYENLINDVQVGSYILLDDGL--------IELQVKDIDHAKKEVKCDILNSGELKNKK-GVNLPGVRVSLPGITEKDAEDI-RFGIKENVDFIAASFVRRPSDVLEIREILEE--QKANISVFPKIENQEGI 226          
BLAST of DY271086 vs. ExPASy Swiss-Prot
Match: KPYK_STAA3 (Pyruvate kinase OS=Staphylococcus aureus (strain USA300) GN=pyk PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 7.386e-23
Identity = 70/236 (29.66%), Postives = 126/236 (53.39%), Query Frame = 2
Query:  182 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEV--KGNDVTCVIKNTATLAGSLFTLHASQIRIELPTLSDKNKEVISSWGIPKQIDFLSLSYTRHAENVGQAREYLSNLGGLSQTQIFAKIENKKGL 883
            TKIV T+GP S S ++I   + AGM+VAR +FS G+ E H+  ++ ++   K   K+ A++LDT GPE++  N  +  I L+    V+++ +   E T +   + ++ L   V+ G  I +   L        + L+V ++     +V C I N+  L      ++   +R+ LP +++K+ E I  +GI + +DF++ S+ R   +V + RE L      +   +F KIEN++G+
Sbjct:    4 TKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDGIIELERGNEVIVSMN-EVEGTPEKFSVTYENLINDVQVGSYILLDDGL--------IELQVKDIDHAKKEVKCDILNSGELKNKK-GVNLPGVRVSLPGITEKDAEDI-RFGIKENVDFIAASFVRRPSDVLEIREILEE--QKANISVFPKIENQEGI 226          
BLAST of DY271086 vs. ExPASy Swiss-Prot
Match: KPYK_BACLI (Pyruvate kinase OS=Bacillus licheniformis GN=pyk PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 8.166e-22
Identity = 71/236 (30.08%), Postives = 125/236 (52.97%), Query Frame = 2
Query:  182 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGN--DVTCVIKNTATLAGSLFTLHASQIRIELPTLSDKNKEVISSWGIPKQIDFLSLSYTRHAENVGQAREYLSNLGGLSQTQIFAKIENKKGL 883
            TKIV T+GP S SV+ ++  ++AGM+VAR +FS G+ E H   ++N++ A     K   ++LDT GPE++       +I L A   ++++ D     T   + + +DGL   V  G TI +   L        V LEV+++  +  ++   + N+ TL      ++   + + LP +++K+   I  +GI + +DF++ S+ R   +V + RE L      +  QI  KIEN++G+
Sbjct:    4 TKIVCTIGPASESVEKLTQLMEAGMNVARLNFSHGDFEEHGARIKNIREAAGKLGKDIGILLDTKGPEIRTHTMENGSIELAAGSQLIVSMD-EVIGTPDKISVTYDGLIHDVSVGSTILLDDGL--------VGLEVTDINKDKREIVTKVMNSGTLKNKK-GVNVPGVSVNLPGITEKDANDI-VFGIEQGVDFIAASFVRRPSDVLEIRELLEE-HNAADIQIIPKIENQEGV 227          
BLAST of DY271086 vs. ExPASy Swiss-Prot
Match: KPYK_STAES (Pyruvate kinase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pyk PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.067e-21
Identity = 70/236 (29.66%), Postives = 124/236 (52.54%), Query Frame = 2
Query:  182 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGN--DVTCVIKNTATLAGSLFTLHASQIRIELPTLSDKNKEVISSWGIPKQIDFLSLSYTRHAENVGQAREYLSNLGGLSQTQIFAKIENKKGL 883
            TKIV T+GP S S +++   + AGM+VAR +FS G+ E H+  ++ ++   K   K   ++LDT GPE++  N  +  I L+    V+++ +   E T +   + ++ L   V  G  I +   L        V L+V E+  +  +V C I NT  L      ++   +++ LP ++DK+ + I  +GI + +DF++ S+ R   +V   R+ L      ++  IF KIEN++G+
Sbjct:    4 TKIVCTIGPASESEEMLEKLMNAGMNVARLNFSHGSHEEHKARIDTIRKVAKRLNKTIGLLLDTKGPEIRTHNMKDGLIVLEKGKEVIVSMN-EVEGTPEKFSVTYENLINDVNIGSYILLDDGL--------VELQVKEINKDKGEVKCDILNTGELKNKK-GVNLPGVKVNLPGITDKDADDI-RFGIKENVDFIAASFVRRPSDVLDIRQILEE--EKAEITIFPKIENQEGI 226          
BLAST of DY271086 vs. ExPASy Swiss-Prot
Match: KPYK_STAEQ (Pyruvate kinase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pyk PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.067e-21
Identity = 70/236 (29.66%), Postives = 124/236 (52.54%), Query Frame = 2
Query:  182 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGN--DVTCVIKNTATLAGSLFTLHASQIRIELPTLSDKNKEVISSWGIPKQIDFLSLSYTRHAENVGQAREYLSNLGGLSQTQIFAKIENKKGL 883
            TKIV T+GP S S +++   + AGM+VAR +FS G+ E H+  ++ ++   K   K   ++LDT GPE++  N  +  I L+    V+++ +   E T +   + ++ L   V  G  I +   L        V L+V E+  +  +V C I NT  L      ++   +++ LP ++DK+ + I  +GI + +DF++ S+ R   +V   R+ L      ++  IF KIEN++G+
Sbjct:    4 TKIVCTIGPASESEEMLEKLMNAGMNVARLNFSHGSHEEHKARIDTIRKVAKRLNKTIGLLLDTKGPEIRTHNMKDGLIVLEKGKEVIVSMN-EVEGTPEKFSVTYENLINDVNIGSYILLDDGL--------VELQVKEINKDKGEVKCDILNTGELKNKK-GVNLPGVKVNLPGITDKDADDI-RFGIKENVDFIAASFVRRPSDVLDIRQILEE--EKAEITIFPKIENQEGI 226          
BLAST of DY271086 vs. ExPASy Swiss-Prot
Match: KPYK_DROME (Pyruvate kinase OS=Drosophila melanogaster GN=PyK PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 1.067e-21
Identity = 71/246 (28.86%), Postives = 137/246 (55.69%), Query Frame = 2
Query:  179 MTKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKT-TKKL-----CAVMLDTVGPELQ---VVNKSEKAISLKADGSVVLT--PDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIELPTLSDKNKEVISSWGIPKQIDFLSLSYTRHAENVGQAREYLSNLGGLSQTQIFAKIENKKGL 883
            ++ IV T+GP S SV+++   +  GM++AR +FS G+ EYH  T+ N++ AVK  + KL      A+ LDT GPE++   +       I LK    + LT   +  ++ + +++ ++++ +   VK G+ +F+   L +        L V EV  + +TC ++N  +L GS   ++   + ++LP +S+K+K  +  +G+ +++D +  S+ R+A  + + R+ L   G     +I +KIEN++G+
Sbjct:   47 LSGIVCTIGPASSSVEMLEKMMATGMNIARMNFSHGSHEYHAATVANVRQAVKNYSAKLGYEHPVAIALDTKGPEIRTGLIGGSGTAEIELKKGEKIKLTTNKEFLEKGSLEIVYVDYENIVNVVKPGNRVFVDDGLIS--------LIVREVGKDSLTCEVENGGSL-GSRKGVNLPGVPVDLPAVSEKDKSDL-LFGVEQEVDMIFASFIRNAAALTEIRKVLGEKG--KNIKIISKIENQQGM 280          
BLAST of DY271086 vs. ExPASy Swiss-Prot
Match: KPYK_BACSU (Pyruvate kinase OS=Bacillus subtilis GN=pyk PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 2.376e-21
Identity = 68/236 (28.81%), Postives = 126/236 (53.39%), Query Frame = 2
Query:  182 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKG--NDVTCVIKNTATLAGSLFTLHASQIRIELPTLSDKNKEVISSWGIPKQIDFLSLSYTRHAENVGQAREYLSNLGGLSQTQIFAKIENKKGL 883
            TKIV T+GP S S+++++  +++GM+VAR +FS G+ E H   ++N++ A K   K   ++LDT GPE++        I L+    ++++ D     T+  + + ++GL   V++G TI +   L        + LEV +V     ++   + N  TL      ++   + + LP +++K+   I  +GI + +DF++ S+ R + +V + RE L         QI  KIEN++G+
Sbjct:    4 TKIVCTIGPASESIEMLTKLMESGMNVARLNFSHGDFEEHGARIKNIREASKKLGKNVGILLDTKGPEIRTHTMENGGIELETGKELIISMD-EVVGTTDKISVTYEGLVHDVEQGSTILLDDGL--------IGLEVLDVDAAKREIKTKVLNNGTLKNKK-GVNVPGVSVNLPGITEKDARDI-VFGIEQGVDFIAPSFIRRSTDVLEIRELLEE-HNAQDIQIIPKIENQEGV 227          
BLAST of DY271086 vs. ExPASy Swiss-Prot
Match: KPYM_RAT (Pyruvate kinase isozymes M1/M2 OS=Rattus norvegicus GN=Pkm2 PE=1 SV=3)

HSP 1 Score: 103.219 bits (256), Expect = 3.103e-21
Identity = 71/248 (28.63%), Postives = 133/248 (53.63%), Query Frame = 2
Query:  182 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKT------TKKLCAVMLDTVGPELQ---VVNKSEKAISLKADGSVVLTPDCG--QEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIELPTLSDKNKEVISSWGIPKQIDFLSLSYTRHAENVGQAREYLSNLGGLSQTQIFAKIENKKGLTPF 892
            T I+ T+GP SRSV+++   +K+GM+VAR +FS G  EYH ET++N++AA ++        +  AV LDT GPE++   +       + LK   ++ +T D    ++    +L +++  + K V+ G  I++   L +        L+V E   + +   ++N  +L GS   ++     ++LP +S+K+ + +  +G+ + +D +  S+ R A +V + R+ L   G     +I +KIEN +G+  F
Sbjct:   45 TGIICTIGPASRSVEMLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRAATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLIS--------LQVKEKGADYLVTEVENGGSL-GSKKGVNLPGAAVDLPAVSEKDIQDL-KFGVEQDVDMVFASFIRKAADVHEVRKVLGEKG--KNIKIISKIENHEGVRRF 280          
BLAST of DY271086 vs. ExPASy Swiss-Prot
Match: KPYK_BACPY (Pyruvate kinase OS=Bacillus psychrophilus GN=pyk PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 3.103e-21
Identity = 71/238 (29.83%), Postives = 125/238 (52.52%), Query Frame = 2
Query:  182 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATL-AGSLFT---LHASQIRIELPTLSDKNKEVISSWGIPKQIDFLSLSYTRHAENVGQAREYLSNLGGLSQTQIFAKIENKKGL 883
            TKIV T+GP S S +++   ++AGM+VAR +FS GN   H+  +++++   +   K+  ++LDT GPE++  +     + L   G  +       E  + V  +++D L + V +G  I +   L              EV G DV   + +T  + +GSL     ++   + ++LP +++K+ E I  +GI + +DF++ S+ R A +V + R  L N  G S  QI  KIEN++G+
Sbjct:    4 TKIVCTIGPASESPELLEQLIEAGMNVARLNFSHGNHAEHKARIDSIRKVAREKGKVVGILLDTKGPEIRTHSMMNGKLEL-VTGQKIDISMTQVEGNNDVFSVSYDKLIEDVNEGSVILLDDGLIQ-----------LEVTGKDVARGLIHTLIINSGSLSNNKGVNIPGVSVQLPGMTEKDAEDI-LFGIREGVDFIAASFVRRASDVMEIRALLENNNG-SNLQIIPKIENQEGV 227          
BLAST of DY271086 vs. ExPASy Swiss-Prot
Match: KPYM_FELCA (Pyruvate kinase isozyme M1 OS=Felis catus GN=PKM2 PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 5.293e-21
Identity = 71/248 (28.63%), Postives = 132/248 (53.23%), Query Frame = 2
Query:  182 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKT------TKKLCAVMLDTVGPELQ---VVNKSEKAISLKADGSVVLTPDCG--QEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIELPTLSDKNKEVISSWGIPKQIDFLSLSYTRHAENVGQAREYLSNLGGLSQTQIFAKIENKKGLTPF 892
            T I+ T+GP SRSV+++   +K+GM+VAR +FS G  EYH ET++N++AA ++        +  AV LDT GPE++   +       + LK   ++ +T D    ++    VL +++  + K V+ G  +++   L +        L V E   + +   ++N  +L GS   ++     ++LP +S+K+ + +  +G+ + +D +  S+ R A +V + R+ L   G     +I +KIEN +G+  F
Sbjct:   45 TGIICTIGPASRSVEILKEMIKSGMNVARLNFSHGTHEYHAETIKNVRAATESFASDPIRYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENVLWLDYKNICKVVEVGSKVYVDDGLIS--------LLVKEKGADFLVTEVENGGSL-GSKKGVNLPGAAVDLPAVSEKDIQDL-KFGVEQDVDMVFASFIRKASDVHEVRKVLGEKG--KNIKIISKIENHEGVRRF 280          
The following BLAST results are available for this feature:
BLAST of DY271086 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
KPYK_STAA87.386e-2329.66Pyruvate kinase OS=Staphylococcus aureus (strain N... [more]
KPYK_STAA37.386e-2329.66Pyruvate kinase OS=Staphylococcus aureus (strain U... [more]
KPYK_BACLI8.166e-2230.08Pyruvate kinase OS=Bacillus licheniformis GN=pyk P... [more]
KPYK_STAES1.067e-2129.66Pyruvate kinase OS=Staphylococcus epidermidis (str... [more]
KPYK_STAEQ1.067e-2129.66Pyruvate kinase OS=Staphylococcus epidermidis (str... [more]
KPYK_DROME1.067e-2128.86Pyruvate kinase OS=Drosophila melanogaster GN=PyK ... [more]
KPYK_BACSU2.376e-2128.81Pyruvate kinase OS=Bacillus subtilis GN=pyk PE=1 S... [more]
KPYM_RAT3.103e-2128.63Pyruvate kinase isozymes M1/M2 OS=Rattus norvegicu... [more]
KPYK_BACPY3.103e-2129.83Pyruvate kinase OS=Bacillus psychrophilus GN=pyk P... [more]
KPYM_FELCA5.293e-2128.63Pyruvate kinase isozyme M1 OS=Felis catus GN=PKM2 ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YM17FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271086 ID=DY271086; Name=DY271086; organism=Citrus clementina; type=EST; length=1184bp
TAAAATTCAAAACATTCTAATCAACGCTAACCGCTGCCTCTTTCATCTCT
CGTACTCTCTCTGTATCTCTCTGTATCTCTCTGTTCAGTGAAAGATGCAT
TCAAGTCACTTGCTTCTCGAGGAGCCAATCAGGATGGCTTCAATCCTGGA
GCCATCCAAAGCCAGTTTCTTCCCGGCAATGACCAAAATTGTCGGAACGC
TTGGTCCTAAATCTCGATCTGTTGATGTTATATCCGGTTGCCTCAAAGCT
GGAATGTCTGTGGCTAGATTCGATTTCTCGTGGGGTAATACTGAATACCA
CCAAGAGACCTTGGAGAATCTCAAGGCGGCAGTTAAGACTACTAAGAAGC
TTTGTGCTGTTATGTTGGACACAGTGGGTCCCGAATTGCAGGTTGTTAAT
AAGAGTGAGAAGGCAATTTCACTTAAGGCAGATGGTTCTGTTGTTCTCAC
ACCTGACTGTGGACAAGAAGCCACTTCTCAAGTTTTGCCCATCAATTTCG
ATGGACTTGCTAAGTCAGTGAAGAAAGGAGACACCATTTTTATCGGTCAA
TACTTGTTCACTGGAAGTGAGACTACTTCTGTGTGGCTGGAGGTTTCTGA
AGTGAAAGGAAATGATGTAACTTGTGTGATAAAGAATACTGCAACGTTGG
CTGGTTCACTTTTCACTTTACATGCCTCTCAAATTCGTATTGAACTGCCA
ACTCTTTCTGATAAAAATAAGGAAGTCATTAGTTCTTGGGGAATTCCAAA
ACAAATTGACTTCCTCTCATTGTCCTATACCCGACATGCAGAAAACGTGG
GCCAAGCTCGCGAATATCTCTCCAATTTGGGTGGACTCAGTCAAACTCAA
ATTTTTGCAAAAATTGAAAATAAAAAGGGGTTGACCCCTTTTTGAAAAAA
ACCTTTCAACCAACAAAAGGTAATTAATTCTTTCCCCTGGGAAATTTGGG
AAACCAATCTTCCTCCCGGAAAAAGGGGTTCCTGTTTTCAAAAAACTGCC
CTTTTAAAAAATGTTAAAATTGGGGGGGAAAAAAACCCCACAGGGGTTTA
CCCCGGTTTTGGGGAAAAAAAATAAAAGGAAAAAACCCGAGAAACCCAAA
CTTCGGGGTCTGAAAAAACAACTGTTATTTTTCTCCCAAAATGGTTGCTG
GTCTTTTAAAAAATGAAAAAAAGGGATATTGACA
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