DY271107

Overview
NameDY271107
Unique NameDY271107
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1135
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271107 vs. ExPASy Swiss-Prot
Match: CRUST_PANBO (Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.917e-34
Identity = 86/219 (39.27%), Postives = 122/219 (55.71%), Query Frame = 3
Query:  198 DEKHKRFNVFKQNVMHVHQTN----KMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQ-NQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLRAVAKH-PGSIPINARQ 836
            +E+  R +VF   +  + + N    K +  Y LK+N F+D+T+ E  +T  G   + H +    +   T      T + + VDWR KG+VT VKDQGQCGSCWAFS +AA+EG + + T  LVSLSEQ LVDC +   NQGCNGG    A+++I    G+ TE+ YPY+A D  C     +  A ++  +    +  E AL  AV    P S+ I+A Q
Sbjct:   35 EEESHRMSVFMDKLKFIQEHNERYDKGEVTYWLKINNFSDLTHEEVLATKTGMTRRRHPLSVLPKSAPT------TPMAADVDWRNKGAVTPVKDQGQCGSCWAFSAVAALEGAHFLKTGDLVSLSEQNLVDCSSSYGNQGCNGGWPYQAYQYIIANRGIDTESSYPYKAIDDNCRYDAGNIGA-TVSSYVEPASGDESALQHAVQNEGPVSVCIDAGQ 246          
BLAST of DY271107 vs. ExPASy Swiss-Prot
Match: CATK_RAT (Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.917e-34
Identity = 89/242 (36.78%), Postives = 133/242 (54.96%), Query Frame = 3
Query:  126 LESEEGLWDLYERWRSHH--TVSRSLDEKHKRFNVFKQNV----MHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLRAVAK-HPGSIPINA 830
            L  EE L   +E W+  H    +  +DE  +R  ++++N+    +H  + +     Y+L +N   DMT+ E      G ++   R F           G+V   P S+D+RKKG VT VK+QGQCGSCWAFS+  A+EG     T KL++LS Q LVDC   +N GC GG M  AF+++++ GG+ +E  YPY   D +C +   ++ A    G+  +P  +E AL RAVA+  P S+ I+A
Sbjct:   16 LSPEETLDTQWELWKKTHGKQYNSKVDEISRRL-IWEKNLKKISVHNLEASLGAHTYELAMNHLGDMTSEEVVQKMTGLRVPPSRSFSNDTLYTPEWEGRV---PDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDC-VSENYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQDESC-MYNATAKAAKCRGYREIPVGNEKALKRAVARVGPVSVSIDA 251          
BLAST of DY271107 vs. ExPASy Swiss-Prot
Match: MEX2_JACME (Chymomexicain OS=Jacaratia mexicana PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 5.115e-34
Identity = 66/133 (49.62%), Postives = 89/133 (66.92%), Query Frame = 3
Query:  420 PSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLRAVAKHPGSI 818
            P S+DWR KG+VT VK+Q  CGSCWAFST+A VEGIN I T KL+SLSEQEL+DCD  ++ GC GG    + +++   GGV TE +YPY+   G C   ++    V I G++ VPAN E +L++ +   P S+
Sbjct:    2 PESIDWRDKGAVTPVKNQNPCGSCWAFSTVATVEGINKIRTGKLISLSEQELLDCDR-RSHGCKGGYQTGSIQYVADNGGVHTEKEYPYEKKQGKCRAKEKKGTKVQITGYKRVPANDEISLIQGIGNQPVSV 133          
BLAST of DY271107 vs. ExPASy Swiss-Prot
Match: CATL6_HUMAN (Putative cathepsin L-like protein 6 OS=Homo sapiens GN=CTSLL6 PE=5 SV=3)

HSP 1 Score: 145.206 bits (365), Expect = 6.681e-34
Identity = 78/187 (41.71%), Postives = 111/187 (59.36%), Query Frame = 3
Query:  243 HVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQ-NQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLRAVA 800
            H  + ++    + + +N F DMTN EF     G + + HR  +       F    +  IP+SVDWR+KG +T VKDQGQCGSCWAFS   A+EG     T KL+SL+EQ LVDC   Q N+GCNGG M+  F ++++ GG+ +EA YPY+    TC  + + S A +  G  ++P+  +D L +AVA
Sbjct:    5 HNQEYSQGKHSFTMAMNAFGDMTNEEFRQVMNGFQYQKHRKGK------QFQERLLPEIPTSVDWREKGYMTPVKDQGQCGSCWAFSATGALEGQMFWKTGKLISLNEQNLVDCSGPQGNEGCNGGFMDNPFRYVQENGGLDSEASYPYEGKVKTCRYNPKYS-AANDTGFVDIPSQEKD-LAKAVA 183          
BLAST of DY271107 vs. ExPASy Swiss-Prot
Match: CATK_MOUSE (Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 6.681e-34
Identity = 90/242 (37.19%), Postives = 132/242 (54.55%), Query Frame = 3
Query:  126 LESEEGLWDLYERWRSHHT--VSRSLDEKHKRFNVFKQNVMHVHQTNKMDK----PYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLRAVAK-HPGSIPINA 830
            L  EE L   +E W+  H    +  +DE  +R  ++++N+  +   N         Y+L +N   DMT+ E      G +I   R +           G+V   P S+D+RKKG VT VK+QGQCGSCWAFS+  A+EG     T KL++LS Q LVDC T +N GC GG M  AF+++++ GG+ +E  YPY   D +C +   ++ A    G+  +P  +E AL RAVA+  P S+ I+A
Sbjct:   16 LSPEEMLDTQWELWKKTHQKQYNSKVDEISRRL-IWEKNLKQISAHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLRIPPSRSYSNDTLYTPEWEGRV---PDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVT-ENYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQDESC-MYNATAKAAKCRGYREIPVGNEKALKRAVARVGPISVSIDA 251          
BLAST of DY271107 vs. ExPASy Swiss-Prot
Match: CATH_BOVIN (Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 8.725e-34
Identity = 82/219 (37.44%), Postives = 116/219 (52.97%), Query Frame = 3
Query:  156 YERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGS-VTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTD-QNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLRAVAKH 806
            ++ W   H    S +E + R   F  N+  ++  N  +  +K+ LN+F+DM+  E    Y  S+ ++    +     GT  Y      P S+DWRKKG+ VT VK+QG CGSCW FST  A+E    I T KL  L+EQ+LVDC  +  N GC GGL   AFE+I+   G+  E  YPY+  DG C   + S     +    N+  N E+A++ AVA H
Sbjct:   35 FQSWMVQHQKKYSSEEYYHRLQAFASNLREINAHNARNHTFKMGLNQFSDMSFDELKRKYLWSEPQNCSATKSNYLRGTGPY------PPSMDWRKKGNFVTPVKNQGSCGSCWTFSTTGALESAVAIATGKLPFLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYRGQDGDCKY-QPSKAIAFVKDVANITLNDEEAMVEAVALH 246          
BLAST of DY271107 vs. ExPASy Swiss-Prot
Match: RD19A_ARATH (Cysteine proteinase RD19a OS=Arabidopsis thaliana GN=RD19A PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.488e-33
Identity = 88/247 (35.63%), Postives = 125/247 (50.61%), Query Frame = 3
Query:  117 EKELESEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTD--------QNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDG-TCDVSKESSPAVSIDGHENVPANHEDALLRAVAKHPGSIPINA 830
            E ++ + E  + L++R      V  S +E   RF+VFK N+    +  K+D      + +F+D+T  EF   + G +      F+  +           ++P   DWR  G+VT VK+QG CGSCW+FS   A+EG N + T KLVSLSEQ+LVDCD +         + GCNGGLM  AFE+  K GG+  E  YPY   DG TC + K S    S+     +  + E      V   P ++ INA
Sbjct:   41 EPQVLTSEDHFSLFKR--KFGKVYASNEEHDYRFSVFKANLRRARRHQKLDPSATHGVTQFSDLTRSEFRKKHLGVRSG----FKLPKDANKAPILPTENLPEDFDWRDHGAVTPVKNQGSCGSCWSFSATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEADSCDSGCNGGLMNSAFEYTLKTGGLMKEEDYPYTGKDGKTCKLDK-SKIVASVSNFSVISIDEEQIAANLVKNGPLAVAINA 280          
BLAST of DY271107 vs. ExPASy Swiss-Prot
Match: ORYC_ORYSJ (Oryzain gamma chain OS=Oryza sativa subsp. japonica GN=Os09g0442300 PE=2 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 2.539e-33
Identity = 80/200 (40.00%), Postives = 108/200 (54.00%), Query Frame = 3
Query:  201 EKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQ-GCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLRAV 797
            E  +RF +F +++  V  TN+   PY+L +N+FADM+  EF ++  G+         G             ++P + DWR+ G V+ VKDQG CGSCW FST  ++E      T K VSLSEQ+LVDC T  N  GC+GGL   AFE+IK  GG+ TE  YPY   +G C    E+     +D   N+    ED L  AV
Sbjct:   78 EVQRRFRIFSESLELVRSTNRRGLPYRLGINRFADMSWEEFQASRLGAAQNCSATLAGNH-----RMRDAAALPETKDWREDGIVSPVKDQGHCGSCWTFSTTGSLEAAYTQATGKPVSLSEQQLVDCATAYNNFGCSGGLPSQAFEYIKYNGGLDTEEAYPYTGVNGICHYKPENVGVKVLDS-VNITLGAEDELKNAV 271          
BLAST of DY271107 vs. ExPASy Swiss-Prot
Match: CYSP1_DICDI (Cysteine proteinase 1 OS=Dictyostelium discoideum GN=cprA PE=1 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 2.539e-33
Identity = 86/234 (36.75%), Postives = 128/234 (54.70%), Query Frame = 3
Query:  192 SLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLK----LNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGK-VTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTD---------QNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLRAVAKHPGSIPINARQFKISI 851
            S +E  +RF +FK N+  + + N +   +K      +NKFAD+++ EF + Y  +K     +F        ++  + + SIP++ DWR +G+VT VK+QGQCGSCW+FST   VEG + I  NKLVSLSEQ LVDCD +          ++GCNGGL   A+ +I K GG+ TE+ YPY A  GT      ++    I     +P N        V+  P +I  +A +++  I
Sbjct:   41 SHEEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDEFKNYYLNNK---EAIFTDDLPVADYLDDEFINSIPTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEQACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGAKISNFTMIPKNETVMAGYIVSTGPLAIAADAVEWQFYI 271          
BLAST of DY271107 vs. ExPASy Swiss-Prot
Match: CATV_GVXN (Viral cathepsin OS=Xestia c-nigrum granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 2.539e-33
Identity = 84/224 (37.50%), Postives = 124/224 (55.36%), Query Frame = 3
Query:  174 HHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNG----TFMYGKVTS-IPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLRAV-AKHPGSIPIN 827
            ++ V +   EK  RF +FKQN+  ++  N ++     ++N  AD++++E      G K+    + +G + N     T + G  +  +P S DWR + SVT+VK Q +CGSCWAFS +A +E + HI  N  + LSEQ+LVDCD   N GCNGGLM  AFE I + GG++ EA YPY   DG C   K ++  V + G        E  L + +  K P S+ I+
Sbjct:   50 YNKVYKDDQEKEARFEIFKQNLADINARNALEDSAMFEINSRADISSNELLQKLTGLKLS---LMRGEKKNSFCTPTVISGDSSGKVPDSFDWRDRNSVTSVKMQKECGSCWAFSAVANIESLYHIKHNVSLDLSEQQLVDCD-KVNNGCNGGLMSWAFEGIIRAGGISYEAPYPYTGVDGVC---KNTTRYVQLSGCYAYDLRSEKKLRQVLHEKGPVSVAID 266          
The following BLAST results are available for this feature:
BLAST of DY271107 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 157
Match NameE-valueIdentityDescription
CRUST_PANBO3.917e-3439.27Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1[more]
CATK_RAT3.917e-3436.78Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1[more]
MEX2_JACME5.115e-3449.62Chymomexicain OS=Jacaratia mexicana PE=1 SV=1[more]
CATL6_HUMAN6.681e-3441.71Putative cathepsin L-like protein 6 OS=Homo sapien... [more]
CATK_MOUSE6.681e-3437.19Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2[more]
CATH_BOVIN8.725e-3437.44Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1[more]
RD19A_ARATH1.488e-3335.63Cysteine proteinase RD19a OS=Arabidopsis thaliana ... [more]
ORYC_ORYSJ2.539e-3340.00Oryzain gamma chain OS=Oryza sativa subsp. japonic... [more]
CYSP1_DICDI2.539e-3336.75Cysteine proteinase 1 OS=Dictyostelium discoideum ... [more]
CATV_GVXN2.539e-3337.50Viral cathepsin OS=Xestia c-nigrum granulosis viru... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YN21FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271107 ID=DY271107; Name=DY271107; organism=Citrus clementina; type=EST; length=1135bp
CTCGTAAGTACCACTTGAAAAAGAAAAAAAAAGGTTAAAAAATGAAGAGG
GTTTATTTATTAGCTGCCTTTTTGCTAGCTTTGGTTCTGGGAATCGTTGA
GGGTTTCGATTTCCATGAGAAGGAGTTGGAATCCGAGGAAGGTCTGTGGG
ATTTATACGAGAGGTGGAGGAGTCATCATACGGTTTCAAGGAGTCTTGAT
GAGAAGCATAAGCGCTTCAATGTGTTCAAGCAAAATGTTATGCATGTTCA
CCAAACTAACAAGATGGACAAGCCTTACAAGTTGAAGCTGAACAAGTTTG
CGGACATGACAAATCATGAATTTGCAAGCACATACGCTGGATCAAAGATT
AAGCATCACAGGATGTTCCAAGGGACGCGTGGAAACGGGACCTTCATGTA
TGGGAAGGTAACGAGTATCCCATCATCAGTCGATTGGAGGAAGAAAGGGT
CTGTCACCGCTGTCAAGGATCAAGGCCAATGCGGTAGCTGCTGGGCTTTT
TCAACAATTGCAGCAGTAGAGGGCATTAATCACATTATGACAAATAAGCT
CGTTTCTTTGTCTGAGCAAGAGTTAGTTGATTGTGACACTGATCAAAACC
AAGGATGTAATGGAGGGCTAATGGAATTGGCATTTGAGTTCATCAAGAAA
AAGGGTGGCGTAACAACAGAGGCTAAGTACCCTTACCAAGCTAATGATGG
AACATGTGACGTTTCAAAGGAAAGTTCCCCAGCAGTGTCAATTGACGGAC
ATGAAAATGTACCTGCTAATCACGAGGATGCTCTGCTTAGGGCAGTTGCA
AAACACCCTGGGTCAATACCCATAAATGCCCGGCAGTTCAAAATTTCCAT
TTCTATTCAAGGGGGGAATTTACGGGAAAAAGTGGCCAAAAACTGAATCC
TGGAATTTCCACCTGGGGGCTTACGGGTCAACCCTCCCAAGGGAACCAAT
TATTGGGAAAATTAGGAAACTCTGGGGGAACCTGAAATGGGGGAAAAAAA
AAGGGTAAACATTTAAAAAGCCACCCCGGGCCCTTCTCAAAAAAAAAAAA
GGGAACTCCCGGGGGTTATTTGCAAGGGGAAAACTTTCTTTTTCTCCCCC
TAAAAAAAAAATTTTTCCCAAAAAAACCCCAAAAA
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