DY271109

Overview
NameDY271109
Unique NameDY271109
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1121
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271109 vs. ExPASy Swiss-Prot
Match: HSFA5_ORYSJ (Heat stress transcription factor A-5 OS=Oryza sativa subsp. japonica GN=HSFA5 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 9.199e-28
Identity = 56/95 (58.95%), Postives = 73/95 (76.84%), Query Frame = 2
Query:  278 PTPFLTKTYQLVDDQAIDDVISWNK-DGTTFVVWNPTIFARDLLPRYFKHNNFSSFVRQLNTYGFKKVVPDRWEFSNDCFRRGEQQLLREIQRRK 559
            P PFL KTY++VDD + D V+SW+     +FVVWN   FA  LLP YFKH+NFSSF+RQLNTYGF+K+ P+RWEF+N+ F +G++ LL+ I RRK
Sbjct:   19 PAPFLLKTYEMVDDPSTDAVVSWSDASDASFVVWNHPEFAARLLPAYFKHSNFSSFIRQLNTYGFRKIDPERWEFANEYFIKGQKHLLKNIHRRK 113          
BLAST of DY271109 vs. ExPASy Swiss-Prot
Match: HFC2A_ORYSJ (Heat stress transcription factor C-2a OS=Oryza sativa subsp. japonica GN=HSFC2A PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 4.565e-27
Identity = 56/91 (61.54%), Postives = 71/91 (78.02%), Query Frame = 2
Query:  284 PFLTKTYQLVDDQAIDDVISWNKDGTTFVVWNPTIFARDLLPRYFKHNNFSSFVRQLNTYGFKKVVPDRWEFSNDCFRRGEQQLLREIQRR 556
            PF+ KTY++VDD A D VI+W +D  +FVV +P  F++ LLP +FKH+NFSSFVRQLNTYGF+KV PDRWEF++  F RG+  LLR I RR
Sbjct:   14 PFVAKTYRMVDDPATDGVIAWGRDSNSFVVADPFAFSQTLLPAHFKHSNFSSFVRQLNTYGFRKVDPDRWEFAHVSFLRGQTHLLRRIVRR 104          
BLAST of DY271109 vs. ExPASy Swiss-Prot
Match: HSFA9_ARATH (Heat stress transcription factor A-9 OS=Arabidopsis thaliana GN=HSFA9 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.017e-26
Identity = 51/92 (55.43%), Postives = 73/92 (79.35%), Query Frame = 2
Query:  281 TPFLTKTYQLVDDQAIDDVISWNKDGTTFVVWNPTIFARDLLPRYFKHNNFSSFVRQLNTYGFKKVVPDRWEFSNDCFRRGEQQLLREIQRR 556
            TPFL KT+++VDD+  D V+SW+    +F++W+   F+ +LLP+YFKH NFSSF+RQLN+YGFKKV  DRWEF+N+ F+ G++ LL+ I+RR
Sbjct:   70 TPFLRKTFEIVDDKVTDPVVSWSPTRKSFIIWDSYEFSENLLPKYFKHKNFSSFIRQLNSYGFKKVDSDRWEFANEGFQGGKKHLLKNIKRR 161          
BLAST of DY271109 vs. ExPASy Swiss-Prot
Match: HFC2B_ORYSJ (Heat stress transcription factor C-2b OS=Oryza sativa subsp. japonica GN=HSFC2B PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.735e-26
Identity = 55/91 (60.44%), Postives = 69/91 (75.82%), Query Frame = 2
Query:  284 PFLTKTYQLVDDQAIDDVISWNKDGTTFVVWNPTIFARDLLPRYFKHNNFSSFVRQLNTYGFKKVVPDRWEFSNDCFRRGEQQLLREIQRR 556
            PF+ KTY++V+D   D VI W K   +FVV +P +F++ LLP +FKHNNFSSFVRQLNTYGF+KV PDRWEF++  F RG+  LLR I RR
Sbjct:   11 PFVWKTYRMVEDPGTDGVIGWGKGNNSFVVADPFVFSQTLLPAHFKHNNFSSFVRQLNTYGFRKVDPDRWEFAHASFLRGQTHLLRNIVRR 101          
BLAST of DY271109 vs. ExPASy Swiss-Prot
Match: HSFC1_ARATH (Heat stress transcription factor C-1 OS=Arabidopsis thaliana GN=HSFC1 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 2.266e-26
Identity = 54/92 (58.70%), Postives = 71/92 (77.17%), Query Frame = 2
Query:  284 PFLTKTYQLVDDQAIDDVISWNKDGTTFVVWNPTIFARDLLPRYFKHNNFSSFVRQLNTYGFKKVVPDRWEFSNDCFRRGEQQLLREIQRRK 559
            PF+ KTYQ+V+D + D +I+W     +F+V +P  F++ +LP YFKHNNFSSFVRQLNTYGF+KV PDRWEF+N+ F RG++ LL  I RRK
Sbjct:   17 PFIVKTYQMVNDPSTDWLITWGPAHNSFIVVDPLDFSQRILPAYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEHFLRGQKHLLNNIARRK 108          
BLAST of DY271109 vs. ExPASy Swiss-Prot
Match: HSFA9_ORYSJ (Heat stress transcription factor A-9 OS=Oryza sativa subsp. japonica GN=HSFA9 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 8.610e-26
Identity = 55/95 (57.89%), Postives = 73/95 (76.84%), Query Frame = 2
Query:  284 PFLTKTYQLVDDQAIDDVISWNKDGTTFVVWNPTIFARDLLPRYFKHNNFSSFVRQLNTYGFKKVVPDRWEFSNDCFRRGEQQLLREIQRRKIQS 568
            PFLTK Y +V D A D+VISW + G +FV+W+   F RDL  R+FKH+NF+SF+RQLNTYGF+KV PDRWE++N+ F  G++ LL+ I+RRK  S
Sbjct:   50 PFLTKVYDMVSDPATDNVISWAEGGGSFVIWDSHAFERDL-HRHFKHSNFTSFIRQLNTYGFRKVHPDRWEWANEGFIMGQKHLLKTIKRRKKSS 143          
BLAST of DY271109 vs. ExPASy Swiss-Prot
Match: HFC1A_ORYSJ (Heat stress transcription factor C-1a OS=Oryza sativa subsp. japonica GN=HSFC1A PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 4.273e-25
Identity = 53/92 (57.61%), Postives = 68/92 (73.91%), Query Frame = 2
Query:  284 PFLTKTYQLVDDQAIDDVISWNKDGTTFVVWNPTIFARDLLPRYFKHNNFSSFVRQLNTYGFKKVVPDRWEFSNDCFRRGEQQLLREIQRRK 559
            PF+ KTYQ+V D   D ++ W +D  +FVV +P  F++ LLP +FKH NFSSFVRQLNTYGF+KV PDRWEF+++ F RG+  LL  I RRK
Sbjct:   26 PFVAKTYQMVCDPRTDALVRWGRDNNSFVVVDPAAFSQLLLPCFFKHGNFSSFVRQLNTYGFRKVHPDRWEFAHESFLRGQTHLLPRIVRRK 117          
BLAST of DY271109 vs. ExPASy Swiss-Prot
Match: HSFA8_ARATH (Heat stress transcription factor A-8 OS=Arabidopsis thaliana GN=HSFA8 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 5.581e-25
Identity = 53/97 (54.64%), Postives = 70/97 (72.16%), Query Frame = 2
Query:  272 SMPTPFLTKTYQLVDDQAIDDVISWNKDG-TTFVVWNPTIFARDLLPRYFKHNNFSSFVRQLNTYGFKKVVPDRWEFSNDCFRRGEQQLLREIQRRK 559
            S   PFL K Y +VDD   D +ISW+     +FV+ + T+F+  LLP+YFKH+NFSSF+RQLN YGF+KV  DRWEF+ND F RG++ LL+ + RRK
Sbjct:   15 SSVAPFLRKCYDMVDDSTTDSIISWSPSADNSFVILDTTVFSVQLLPKYFKHSNFSSFIRQLNIYGFRKVDADRWEFANDGFVRGQKDLLKNVIRRK 111          
BLAST of DY271109 vs. ExPASy Swiss-Prot
Match: HFC1B_ORYSJ (Heat stress transcription factor C-1b OS=Oryza sativa subsp. japonica GN=HSFC1B PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.770e-24
Identity = 51/92 (55.43%), Postives = 67/92 (72.83%), Query Frame = 2
Query:  284 PFLTKTYQLVDDQAIDDVISWNKDGTTFVVWNPTIFARDLLPRYFKHNNFSSFVRQLNTYGFKKVVPDRWEFSNDCFRRGEQQLLREIQRRK 559
            PF+ KT+ +V D + + V+ W   G TF+V +P  F+  LLP YFKH NF+SFVRQLNTYGF+KV PDRWEF+++ F RG+ QLL  I R+K
Sbjct:   24 PFVAKTFHMVSDPSTNAVVRWGGAGNTFLVLDPAAFSDFLLPSYFKHRNFASFVRQLNTYGFRKVDPDRWEFAHESFLRGQAQLLPRIVRKK 115          
BLAST of DY271109 vs. ExPASy Swiss-Prot
Match: HFA6A_ORYSJ (Putative heat stress transcription factor A-6a OS=Oryza sativa subsp. japonica GN=HSFA6A PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.770e-24
Identity = 53/93 (56.99%), Postives = 69/93 (74.19%), Query Frame = 2
Query:  284 PFLTKTYQLVDDQAIDDVISWNKDG-TTFVVWNPTIFARDLLPRYFKHNNFSSFVRQLNTYGFKKVVPDRWEFSNDCFRRGEQQLLREIQRRK 559
            PFL KT+++V+D A D V+SW      +FVVW+P  FA  LLP +FKH NFSSF+RQLNTYGF+KV  DRWEF+N+ F  G++ LL  I+RR+
Sbjct:   43 PFLVKTFEMVEDPATDAVVSWGGAARNSFVVWDPHAFAAGLLPLHFKHANFSSFLRQLNTYGFRKVSADRWEFANEDFLGGQRHLLANIRRRR 135          
The following BLAST results are available for this feature:
BLAST of DY271109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
HSFA5_ORYSJ9.199e-2858.95Heat stress transcription factor A-5 OS=Oryza sati... [more]
HFC2A_ORYSJ4.565e-2761.54Heat stress transcription factor C-2a OS=Oryza sat... [more]
HSFA9_ARATH1.017e-2655.43Heat stress transcription factor A-9 OS=Arabidopsi... [more]
HFC2B_ORYSJ1.735e-2660.44Heat stress transcription factor C-2b OS=Oryza sat... [more]
HSFC1_ARATH2.266e-2658.70Heat stress transcription factor C-1 OS=Arabidopsi... [more]
HSFA9_ORYSJ8.610e-2657.89Heat stress transcription factor A-9 OS=Oryza sati... [more]
HFC1A_ORYSJ4.273e-2557.61Heat stress transcription factor C-1a OS=Oryza sat... [more]
HSFA8_ARATH5.581e-2554.64Heat stress transcription factor A-8 OS=Arabidopsi... [more]
HFC1B_ORYSJ2.770e-2455.43Heat stress transcription factor C-1b OS=Oryza sat... [more]
HFA6A_ORYSJ2.770e-2456.99Putative heat stress transcription factor A-6a OS=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YO01FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271109 ID=DY271109; Name=DY271109; organism=Citrus clementina; type=EST; length=1121bp
GTTTCGTTTCCTCTTAGCTCGTTCTCTCGCTTCATCTCGTTCCCTCTCCC
TCTTTAACTCCTCATTCCGAAATGACGAACCTTCTAGAATCACCATAACC
AACTTCTCACCTTCACCCTCCCCACAAAGAAAAATTAAAGAATAAAAAAA
ATCTCCCCTTTCAACCTGATTTCAATTACACTTTATCCATATGACTCCGC
CTCCGACGGCAATGGAGCAGAACGGAGACTCTACACCGTCGCCGACGACT
ACGGCCAGCGACTCTCAACGTTCTATGCCGACGCCGTTTTTGACGAAAAC
TTATCAGTTAGTTGACGATCAGGCGATTGACGACGTTATTTCGTGGAACA
AAGACGGAACTACGTTCGTCGTCTGGAATCCTACCATTTTCGCTAGAGAT
TTGCTTCCTAGATACTTCAAACACAACAATTTTTCTAGCTTCGTTCGTCA
ACTCAACACTTATGGGTTTAAAAAAGTTGTACCCGATCGGTGGGAGTTTT
CTAACGACTGCTTCCGCCGTGGCGAGCAACAGCTTCTGCGTGAAATTCAG
CGACGGAAGATTCAATCAGCGGCGACGGCGCAGCCTGTCACCGTTGCGGT
GCCGGCCGTGGTTCCGGTGGCGAAACCGATTGTGTCGCCGTCGAATTCGG
GGGAAGAGCAGGTGATTTCGTCGAACTCATCACCGGCAGCGGGAGCGGCC
GGTGTAACCGCTCACACGTGTGGAGGTGGTCACACGTGTGCGGAGATAGT
TGAAGAGAACGATAAATTGAGGAAGGAGAATGCTCAGCTGAACAAGCAGG
TGGGGGAAATGAAGAATCTCTGTAACAATATATTTAGTTTGGAGGCCAAA
TAACCCCCTGGGTGGTGTTGGGGGGGGGGGACGGCGGGGGGTCAGGGGGC
AAAGGGGATTTTTTTATCCAAAAAAGCTGTTTTCCTGGGGGTGAGGGGAA
AAGGAAAAAGGATATAGAGTTTGTTTTGCGGTTTCCATAAGGGCGGCCAA
ACCCCGCGAGGGGGAAGGGAAATAAGGGGCGCGGGGAAAACCATTTTCCC
CTTCATAAGGGGGGGGAAAAAAACGCACAGCCCTTATTTGTAGTCCCGGT
GATTTTAAAAAGTATACCGTC
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