DY271110
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271110 vs. ExPASy Swiss-Prot
Match: VAPB_HUMAN (Vesicle-associated membrane protein-associated protein B/C OS=Homo sapiens GN=VAPB PE=1 SV=3) HSP 1 Score: 70.4774 bits (171), Expect = 2.075e-11 Identity = 42/136 (30.88%), Postives = 75/136 (55.15%), Query Frame = 1 Query: 91 MMSTGELLNIEPQ-ELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAGHHVEECKLRVLYVAPPRPPSP 495 M ++L++EPQ EL+F ++ +L+L N TD V FKVKTT P++YCVRPN+G++ ++ +V V +Q + P+ + K KF++Q + A + + ++ + + + KLR ++ P P Sbjct: 1 MAKVEQVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGASINVSVMLQ-PFDYDPNEKSKHKFMVQSMFAPTDTSDME---AVWKEAKPEDLMDSKLRCVFELPAENDKP 132
BLAST of DY271110 vs. ExPASy Swiss-Prot
Match: VAPB_BOVIN (Vesicle-associated membrane protein-associated protein B OS=Bos taurus GN=VAPB PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.075e-11 Identity = 42/136 (30.88%), Postives = 75/136 (55.15%), Query Frame = 1 Query: 91 MMSTGELLNIEPQ-ELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAGHHVEECKLRVLYVAPPRPPSP 495 M ++L++EPQ EL+F ++ +L+L N TD V FKVKTT P++YCVRPN+G++ ++ +V V +Q + P+ + K KF++Q + A + + ++ + + + KLR ++ P P Sbjct: 1 MAKVEQVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGASINVSVMLQ-PFDYDPNEKSKHKFMVQSMFAPTDTSDME---AVWKEAKPEDLMDSKLRCVFELPAENDKP 132
BLAST of DY271110 vs. ExPASy Swiss-Prot
Match: VAPA_BOVIN (Vesicle-associated membrane protein-associated protein A OS=Bos taurus GN=VAPA PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.075e-11 Identity = 45/154 (29.22%), Postives = 79/154 (51.30%), Query Frame = 1 Query: 124 PQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAGHHVEECKLRVLYVAP----------PRPPSPVHEGSEEGSSPR---ASVSD 546 P +L+F ++ +L+L N +D V FKVKTT P++YCVRPN+G++ P T V V +Q + P+ + K KF++Q + A P + + ++ + + + KLR ++ P P P++ ++G P+ S+SD Sbjct: 20 PTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGLTVTVSVMLQ-PFDYDPNEKSKHKFMVQTIFAPPNISDME---AVWKEAKPDELMDSKLRCVFEMPNENDKLNDMEPSKAVPLNAAKQDGPVPKPHSVSLSD 169
BLAST of DY271110 vs. ExPASy Swiss-Prot
Match: SCS2_YEAST (Vesicle-associated membrane protein-associated protein SCS2 OS=Saccharomyces cerevisiae GN=SCS2 PE=1 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 7.885e-11 Identity = 44/126 (34.92%), Postives = 62/126 (49.21%), Query Frame = 1 Query: 112 LNIEPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVTMQSQKEAP-PDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAGHHVEEC--KLRVLYVAPP 480 + I P L + L +Q + +SN +D +AFKVKTT PK YCVRPN VV P T V V E P D +C+DKFL+ + + K + + EA + K++V Y+ P Sbjct: 4 VEISPDVLVYKSPLTEQSTEYASISNNSDQTIAFKVKTTAPKFYCVRPNAAVVAPGETIQVQVIFLGLTEEPAADFKCRDKFLVITLPSPYDLNGKAVADVWSDLEAEFKQQAISKKIKVKYLISP 129 The following BLAST results are available for this feature:
BLAST of DY271110 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271110 ID=DY271110; Name=DY271110; organism=Citrus clementina; type=EST; length=1127bpback to top |