DY271120

Overview
NameDY271120
Unique NameDY271120
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1163
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271120 vs. ExPASy Swiss-Prot
Match: PPIB_ASPNG (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus niger GN=cypB PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.837e-11
Identity = 34/59 (57.63%), Postives = 43/59 (72.88%), Query Frame = -2
Query:   26 LKGSMAEGGDFVKRDGTSGESIYEGKFPDESPRLKHDRPGLLSMSIADRDTLGSQFIIT 202
            +K  M +GGDF + DGT G+SIY  KF DE+ +L+H R GLLSM+ A +DT GSQF IT
Sbjct:   88 IKDFMIQGGDFTRGDGTGGKSIYGEKFADENFKLRHTRKGLLSMANAGKDTNGSQFFIT 146          
BLAST of DY271120 vs. ExPASy Swiss-Prot
Match: PPIB_SCHPO (Peptidyl-prolyl cis-trans isomerase B OS=Schizosaccharomyces pombe GN=cyp4 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.705e-11
Identity = 33/55 (60.00%), Postives = 40/55 (72.73%), Query Frame = -2
Query:   26 MAEGGDFVKRDGTSGESIYEGKFPDESPRLKHDRPGLLSMSIADRDTLGSQFIIT 190
            M +GGD  K DGT G+SIY  +FPDE+ +L H RPGLLSM+ A  D+ GSQF IT
Sbjct:   84 MIQGGDITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANAGPDSNGSQFFIT 138          
BLAST of DY271120 vs. ExPASy Swiss-Prot
Match: PPIB_EMENI (Peptidyl-prolyl cis-trans isomerase B OS=Emericella nidulans GN=cpr2 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.705e-11
Identity = 33/59 (55.93%), Postives = 43/59 (72.88%), Query Frame = -2
Query:   26 LKGSMAEGGDFVKRDGTSGESIYEGKFPDESPRLKHDRPGLLSMSIADRDTLGSQFIIT 202
            +K  M +GGDF + DGT G+SIY  KF DE+ +L+H + GLLSM+ A +DT GSQF IT
Sbjct:   87 IKDFMIQGGDFTRGDGTGGKSIYGAKFKDENFKLRHTKTGLLSMANAGKDTNGSQFFIT 145          
BLAST of DY271120 vs. ExPASy Swiss-Prot
Match: PPIB_CHICK (Peptidyl-prolyl cis-trans isomerase B OS=Gallus gallus GN=PPIB PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.705e-11
Identity = 33/59 (55.93%), Postives = 43/59 (72.88%), Query Frame = -2
Query:   26 LKGSMAEGGDFVKRDGTSGESIYEGKFPDESPRLKHDRPGLLSMSIADRDTLGSQFIIT 202
            +K  M +GGDF + DGT G+SIY  +FPDE+ +LKH  PG +SM+ A +DT GSQF IT
Sbjct:   88 IKDFMIQGGDFTRGDGTGGKSIYGDRFPDENFKLKHYGPGWVSMANAGKDTNGSQFFIT 146          
BLAST of DY271120 vs. ExPASy Swiss-Prot
Match: PPIA_STRCH (Peptidyl-prolyl cis-trans isomerase A OS=Streptomyces chrysomallus GN=ppiA PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.705e-11
Identity = 34/55 (61.82%), Postives = 42/55 (76.36%), Query Frame = -2
Query:   26 MAEGGDFVKRDGTSGESIYEGKFPDESPRLKHDRPGLLSMSIADRDTLGSQFIIT 190
            M +GGDF + DGT G+SIY  KF DE+ +LKHDR GLLSM+ A ++T GSQF IT
Sbjct:   60 MLQGGDFTRGDGTGGKSIYGEKFADENFQLKHDRVGLLSMANAGKNTNGSQFFIT 114          
BLAST of DY271120 vs. ExPASy Swiss-Prot
Match: PPID_HUMAN (40 kDa peptidyl-prolyl cis-trans isomerase OS=Homo sapiens GN=PPID PE=1 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 4.839e-11
Identity = 35/59 (59.32%), Postives = 42/59 (71.19%), Query Frame = -2
Query:   26 LKGSMAEGGDFVKRDGTSGESIYEGKFPDESPRLKHDRPGLLSMSIADRDTLGSQFIIT 202
            +K  M +GGDF  ++GT GESIY  KF DE+   KHDR GLLSM+ A R+T GSQF IT
Sbjct:   77 IKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSMANAGRNTNGSQFFIT 135          
BLAST of DY271120 vs. ExPASy Swiss-Prot
Match: PPIB_RAT (Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus GN=Ppib PE=2 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 4.839e-11
Identity = 33/59 (55.93%), Postives = 43/59 (72.88%), Query Frame = -2
Query:   26 LKGSMAEGGDFVKRDGTSGESIYEGKFPDESPRLKHDRPGLLSMSIADRDTLGSQFIIT 202
            +K  M +GGDF + DGT G+SIY  +FPDE+ +LKH  PG +SM+ A +DT GSQF IT
Sbjct:   97 IKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFIT 155          
BLAST of DY271120 vs. ExPASy Swiss-Prot
Match: PPIB_MOUSE (Peptidyl-prolyl cis-trans isomerase B OS=Mus musculus GN=Ppib PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 4.839e-11
Identity = 33/59 (55.93%), Postives = 43/59 (72.88%), Query Frame = -2
Query:   26 LKGSMAEGGDFVKRDGTSGESIYEGKFPDESPRLKHDRPGLLSMSIADRDTLGSQFIIT 202
            +K  M +GGDF + DGT G+SIY  +FPDE+ +LKH  PG +SM+ A +DT GSQF IT
Sbjct:   97 IKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFIT 155          
BLAST of DY271120 vs. ExPASy Swiss-Prot
Match: PPIB_HUMAN (Peptidyl-prolyl cis-trans isomerase B OS=Homo sapiens GN=PPIB PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 4.839e-11
Identity = 33/59 (55.93%), Postives = 43/59 (72.88%), Query Frame = -2
Query:   26 LKGSMAEGGDFVKRDGTSGESIYEGKFPDESPRLKHDRPGLLSMSIADRDTLGSQFIIT 202
            +K  M +GGDF + DGT G+SIY  +FPDE+ +LKH  PG +SM+ A +DT GSQF IT
Sbjct:   97 IKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFIT 155          
BLAST of DY271120 vs. ExPASy Swiss-Prot
Match: PPIB_BOVIN (Peptidyl-prolyl cis-trans isomerase B OS=Bos taurus GN=PPIB PE=1 SV=4)

HSP 1 Score: 69.3218 bits (168), Expect = 4.839e-11
Identity = 33/59 (55.93%), Postives = 43/59 (72.88%), Query Frame = -2
Query:   26 LKGSMAEGGDFVKRDGTSGESIYEGKFPDESPRLKHDRPGLLSMSIADRDTLGSQFIIT 202
            +K  M +GGDF + DGT G+SIY  +FPDE+ +LKH  PG +SM+ A +DT GSQF IT
Sbjct:   97 IKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFIT 155          
The following BLAST results are available for this feature:
BLAST of DY271120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
PPIB_ASPNG2.837e-1157.63Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPIB_SCHPO3.705e-1160.00Peptidyl-prolyl cis-trans isomerase B OS=Schizosac... [more]
PPIB_EMENI3.705e-1155.93Peptidyl-prolyl cis-trans isomerase B OS=Emericell... [more]
PPIB_CHICK3.705e-1155.93Peptidyl-prolyl cis-trans isomerase B OS=Gallus ga... [more]
PPIA_STRCH3.705e-1161.82Peptidyl-prolyl cis-trans isomerase A OS=Streptomy... [more]
PPID_HUMAN4.839e-1159.3240 kDa peptidyl-prolyl cis-trans isomerase OS=Homo... [more]
PPIB_RAT4.839e-1155.93Peptidyl-prolyl cis-trans isomerase B OS=Rattus no... [more]
PPIB_MOUSE4.839e-1155.93Peptidyl-prolyl cis-trans isomerase B OS=Mus muscu... [more]
PPIB_HUMAN4.839e-1155.93Peptidyl-prolyl cis-trans isomerase B OS=Homo sapi... [more]
PPIB_BOVIN4.839e-1155.93Peptidyl-prolyl cis-trans isomerase B OS=Bos tauru... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YO14FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271120 ID=DY271120; Name=DY271120; organism=Citrus clementina; type=EST; length=1163bp
CTTTAAGGCTAATCATAGTCTTAAAGGTGATGATGAACTGAGAACCTAGT
GTGTCACGATCAGCAATAGACATGGATAAAAGGCCAGGTCTATCATGTTT
TAGCCTCGGTGACTCATCAGGAAATTTCCCCTCATAAATGCTTTCTCCAC
TAGTCCCATCTCTTTTTACAAAGTCACCGCCCTCAGCCATGGAACCTTTA
AGGCTAATCATAGTCTTGACAGGAAGTATGTAGTTTTTGGGGAGCTTGTG
CAAGGACACGAGATACTGAAAAAAATTGAAAATGTTGGCGATGAAGAAGG
GAGACTTACTGTAACAGTGAAGATAATCAATTGTGGTGAAGTTAGCGAGG
ATAAAAAGAAAGGAAATAAATTGAGGGCAGGAAAGGATGCTTCCCTGGAT
GGTGGCAATCATGAAGCACGGAAGAAGGGAAAGCACAAGAAATCTTCAAG
AAATAAGAGGAGGAAGAGAAGACGTTACTCCTCGTCTGATTCAGAGACCT
CTTCAGATTCTGAGACGGAATCATCTGAATCTGATATCGATTCTGACTCG
TACATGTCCTCTTCGTCAGATGTTAGTTCTTCTAGTGATGATAGACGTAA
AAAGAAAAAGAGATCTTCTAAAAGAGACAAACATAGGCGTGGAAAGAGAA
GAGATAGACGCCGGGATAAAAAACGTAAGAGGCGTGATAAGAGATCCAAG
CGCAGATCAAGAAGGTCATCAGATAGTCTCACAGACACTGACAGTGATGG
TAAAAGTGATAGTAGCAGTGAAGATGATGTTCTTCATGTTTGAAGAAAAG
ACCGGAAACAAAAAGAACCTTCTCGGATAGCAGTTGGCAATAAATTCCGC
TCTGGCTGCCAAAGAAGCTGCTTCCTTTCCTGCAAAAAAGGAGGGAGGAA
GAATATGTTTGAAAAAGGAAGAAGGGGAAAAAAACTCCCAGGGGAAAAGG
GGGAACAGCGGGAACCAAGGGGCTTTCTAAGCCGGGTGCCTAAATCTGTG
CAAAATCAAAAAAACCAGCCCGGGAGTGTGGGGGAAAAAAACCTCCCCGG
GCAAAAACCCTAGGAACCCCAAAAACCTTGAAATTCCCTAAAAAAGAAAC
CCTTTTTAATAAAAAAAATTTATAAAAAATTTTTTAATTCCCCCGCGGGG
AGGGGGGCCCCCC
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