DY271120

Overview
NameDY271120
Unique NameDY271120
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1163
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY271120 vs. ExPASy Swiss-Prot
Match: PPIB_DICDI (Peptidyl-prolyl cis-trans isomerase B OS=Dictyostelium discoideum GN=cypB PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 6.321e-11
Identity = 33/55 (60.00%), Postives = 41/55 (74.55%), Query Frame = -2 
Query:   26 MAEGGDFVKRDGTSGESIYEGKFPDESPRLKHDRPGLLSMSIADRDTLGSQFIIT 190
            M +GGDF + DGT GESIY  KF DE+ ++KH +PGLLSM+ A  +T GSQF IT
Sbjct:   94 MIQGGDFTRGDGTGGESIYGKKFNDENFKIKHSKPGLLSMANAGPNTNGSQFFIT 148
[Close]
BLAST of DY271120 vs. ExPASy Swiss-Prot
Match: CYPH_SCHPO (Peptidyl-prolyl cis-trans isomerase OS=Schizosaccharomyces pombe GN=ppi1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 6.321e-11
Identity = 33/55 (60.00%), Postives = 42/55 (76.36%), Query Frame = -2 
Query:   26 MAEGGDFVKRDGTSGESIYEGKFPDESPRLKHDRPGLLSMSIADRDTLGSQFIIT 190
            M +GGDF + +GT G+SIY  KFPDE+  LKH++PGLLSM+ A  +T GSQF IT
Sbjct:   59 MLQGGDFTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNGSQFFIT 113
[Close]
BLAST of DY271120 vs. ExPASy Swiss-Prot
Match: PPID_ASPFU (Peptidyl-prolyl cis-trans isomerase D OS=Aspergillus fumigatus GN=cpr6 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 8.255e-11
Identity = 35/59 (59.32%), Postives = 41/59 (69.49%), Query Frame = -2 
Query:   26 LKGSMAEGGDFVKRDGTSGESIYEGKFPDESPRLKHDRPGLLSMSIADRDTLGSQFIIT 202
            +K  M +GGDF   +GT GESIY  KFPDE+  LKHDRP LLSM+ +   T GSQF IT
Sbjct:   72 IKQFMIQGGDFTNFNGTGGESIYGEKFPDENFELKHDRPFLLSMANSGPGTNGSQFFIT 130
The following BLAST results are available for this feature:
BLAST of DY271120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
PPIB_DICDI6.321e-1160.00Peptidyl-prolyl cis-trans isomerase B OS=Dictyoste... [more]
CYPH_SCHPO6.321e-1160.00Peptidyl-prolyl cis-trans isomerase OS=Schizosacch... [more]
PPID_ASPFU8.255e-1159.32Peptidyl-prolyl cis-trans isomerase D OS=Aspergill... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YO14FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271120 ID=DY271120; Name=DY271120; organism=Citrus clementina; type=EST; length=1163bp
CTTTAAGGCTAATCATAGTCTTAAAGGTGATGATGAACTGAGAACCTAGT
GTGTCACGATCAGCAATAGACATGGATAAAAGGCCAGGTCTATCATGTTT
TAGCCTCGGTGACTCATCAGGAAATTTCCCCTCATAAATGCTTTCTCCAC
TAGTCCCATCTCTTTTTACAAAGTCACCGCCCTCAGCCATGGAACCTTTA
AGGCTAATCATAGTCTTGACAGGAAGTATGTAGTTTTTGGGGAGCTTGTG
CAAGGACACGAGATACTGAAAAAAATTGAAAATGTTGGCGATGAAGAAGG
GAGACTTACTGTAACAGTGAAGATAATCAATTGTGGTGAAGTTAGCGAGG
ATAAAAAGAAAGGAAATAAATTGAGGGCAGGAAAGGATGCTTCCCTGGAT
GGTGGCAATCATGAAGCACGGAAGAAGGGAAAGCACAAGAAATCTTCAAG
AAATAAGAGGAGGAAGAGAAGACGTTACTCCTCGTCTGATTCAGAGACCT
CTTCAGATTCTGAGACGGAATCATCTGAATCTGATATCGATTCTGACTCG
TACATGTCCTCTTCGTCAGATGTTAGTTCTTCTAGTGATGATAGACGTAA
AAAGAAAAAGAGATCTTCTAAAAGAGACAAACATAGGCGTGGAAAGAGAA
GAGATAGACGCCGGGATAAAAAACGTAAGAGGCGTGATAAGAGATCCAAG
CGCAGATCAAGAAGGTCATCAGATAGTCTCACAGACACTGACAGTGATGG
TAAAAGTGATAGTAGCAGTGAAGATGATGTTCTTCATGTTTGAAGAAAAG
ACCGGAAACAAAAAGAACCTTCTCGGATAGCAGTTGGCAATAAATTCCGC
TCTGGCTGCCAAAGAAGCTGCTTCCTTTCCTGCAAAAAAGGAGGGAGGAA
GAATATGTTTGAAAAAGGAAGAAGGGGAAAAAAACTCCCAGGGGAAAAGG
GGGAACAGCGGGAACCAAGGGGCTTTCTAAGCCGGGTGCCTAAATCTGTG
CAAAATCAAAAAAACCAGCCCGGGAGTGTGGGGGAAAAAAACCTCCCCGG
GCAAAAACCCTAGGAACCCCAAAAACCTTGAAATTCCCTAAAAAAGAAAC
CCTTTTTAATAAAAAAAATTTATAAAAAATTTTTTAATTCCCCCGCGGGG
AGGGGGGCCCCCC
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