DY271123

Overview
NameDY271123
Unique NameDY271123
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1197
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271123 vs. ExPASy Swiss-Prot
Match: CYSP2_HOMAM (Digestive cysteine proteinase 2 OS=Homarus americanus GN=LCP2 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 8.565e-35
Identity = 83/186 (44.62%), Postives = 113/186 (60.75%), Query Frame = 1
Query:  223 KHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENR----TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDS--VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYN-EGCNGGLMDYAFQFIIDNGGIDTKDDYPYKALDGSC 759
            K+G+ Y    E   R  IF+ N ++I+E N +      T+ + +N+F D+T EE+ ++  G          +S     + P+  E  P +  VDWR KGAV  VKDQG CGSCWAFST  ++EG + + TGSLISL+EQ+LVDC   Y  +GCNGG M+ AF +I  N GIDT+  YPY+A DGSC
Sbjct:   26 KYGRQYVDAEEDSYRRVIFEQNQKYIEEFNKKYENGEVTFNLAMNKFGDMTLEEFNAVMKG------NIPRRSAPVSVFYPKK-ETGPQATEVDWRTKGAVTPVKDQGQCGSCWAFSTTGSLEGQHFLKTGSLISLAEQQLVDCSRPYGPQGCNGGWMNDAFDYIKANNGIDTEAAYPYEARDGSC 204          
BLAST of DY271123 vs. ExPASy Swiss-Prot
Match: LMCPB_LEIME (Cysteine proteinase B OS=Leishmania mexicana GN=LMCPB PE=2 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 1.461e-34
Identity = 81/189 (42.86%), Postives = 118/189 (62.43%), Query Frame = 1
Query:  202 MFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYL-GARF--GAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFQFIID--NGGIDTKDDYPYKALDG 753
            +FE +   +G+AY  L E+++R   F+ NL  + EH + N   + G+ +F DL+  E+ + YL GA +   AKR + +  R  R       A+PD+VDWR+KGAV  VKDQG+CGSCWAFS +  +EG   +    L+SLSEQ+LV CD   N+GC+GGLM  AF +++   NG + T+D YPY + +G
Sbjct:   37 LFEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAARYLNGAAYFAAAKRHAAQHYRKAR---ADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCD-DMNDGCDGGLMLQAFDWLLQNTNGHLHTEDSYPYVSGNG 221          
BLAST of DY271123 vs. ExPASy Swiss-Prot
Match: CYSP2_LEIPI (Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS2 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.461e-34
Identity = 81/189 (42.86%), Postives = 118/189 (62.43%), Query Frame = 1
Query:  202 MFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYL-GARF--GAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFQFIID--NGGIDTKDDYPYKALDG 753
            +FE +   +G+AY  L E+++R   F+ NL  + EH + N   + G+ +F DL+  E+ + YL GA +   AKR + +  R  R       A+PD+VDWR+KGAV  VKDQG+CGSCWAFS +  +EG   +    L+SLSEQ+LV CD   N+GC+GGLM  AF +++   NG + T+D YPY + +G
Sbjct:   37 LFEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAARYLNGAAYFAAAKRHAAQHYRKAR---ADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCD-DMNDGCDGGLMLQAFDWLLQNTNGHLHTEDSYPYVSGNG 221          
BLAST of DY271123 vs. ExPASy Swiss-Prot
Match: CYSP3_HOMAM (Digestive cysteine proteinase 3 OS=Homarus americanus GN=LCP3 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.908e-34
Identity = 78/184 (42.39%), Postives = 109/184 (59.24%), Query Frame = 1
Query:  223 KHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENR----TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFQFIIDNGGIDTKDDYPYKALDGSC 759
            ++G+ Y    E+  R  +F+ N + I++ N +      T+KV +N+F D+TNEE+ ++  G + G++      +    +    G    D VDWR K  V  VKDQ  CGSCWAFS   A+EG + +    L+SLSEQ+LVDC T Y N+GC GG M  AF +I DNGGIDT+  YPY+A D SC
Sbjct:   26 QYGRKYGDAKEELYRQRVFQQNEQLIEDFNKKFENGEVTFKVAMNQFGDMTNEEFNAVMKGYKKGSR-----GEPKAVFTAEAGPMAAD-VDWRTKALVTPVKDQEQCGSCWAFSATGALEGQHFLKNDELVSLSEQQLVDCSTDYGNDGCGGGWMTSAFDYIKDNGGIDTESSYPYEAEDRSC 203          
BLAST of DY271123 vs. ExPASy Swiss-Prot
Match: CATH_RAT (Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.908e-34
Identity = 78/187 (41.71%), Postives = 111/187 (59.36%), Query Frame = 1
Query:  205 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKG-AVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFQFIIDNGGIDTKDDYPYKALDGSC 759
            F +W  +H K Y++  E   R ++F +N R I  HN  N T+K+GLN+F+D++  E +  YL +          S     YL   G   P S+DWRKKG  V+ VK+QG+CGSCW FST  A+E    I +G +++L+EQ+LVDC  ++ N GC GGL   AF++I+ N GI  +D YPY   +G C
Sbjct:   33 FTSWMKQHQKTYSSR-EYSHRLQVFANNWRKIQAHNQRNHTFKMGLNQFSDMSFAEIKHKYLWSE-----PQNCSATKSNYLRGTGP-YPSSMDWRKKGNVVSPVKNQGACGSCWTFSTTGALESAVAIASGKMMTLAEQQLVDCAQNFNNHGCQGGLPSQAFEYILYNKGIMGEDSYPYIGKNGQC 212          
BLAST of DY271123 vs. ExPASy Swiss-Prot
Match: CFAD_DICDI (Counting factor associated protein D OS=Dictyostelium discoideum GN=cfaD PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 4.251e-34
Identity = 69/193 (35.75%), Postives = 114/193 (59.07%), Query Frame = 1
Query:  184 DDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD-TSYNEGCNGGLMDYAFQFIIDNGGIDTKDDYPYKALDGSC 759
            +++   +F+ +  ++ K Y++  E ++RF  FK   + I  HN++  +YK+G+N +ADL+N+E+ ++          T   S   D  L     ++P +VDWR +  V  VKDQG CGSCW F +  ++EG N +  G L+SLSEQ+LVDC   + ++GC GG    AFQ++++ G + T+ +YPY   +G C
Sbjct:  218 EEQASNLFKEYKAQYNKEYSSQDEHDERFINFKAARKIIATHNAKESSYKLGMNHYADLSNKEFNTLVKPKVARPSVTGADSVHDDESL----RSIPSTVDWRNQNCVTPVKDQGICGSCWTFGSTGSLEGTNCVTNGELVSLSEQQLVDCAILTGSQGCGGGFASSAFQYVMEIGSLATESNYPYLMQNGLC 406          
BLAST of DY271123 vs. ExPASy Swiss-Prot
Match: ERVC_TABDI (Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 7.250e-34
Identity = 67/102 (65.69%), Postives = 81/102 (79.41%), Query Frame = 1
Query:  469 LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFQFIIDNGGIDTKDDYPYKALDGSCDTYRK 774
            LP+ +DWRKKGAV  VK+QGSCGSCWAFST++ VE IN+I TG+LISLSEQELVDCD   N GC GG   +A+Q+II+NGGIDT+ +YPYKA+ G C    K
Sbjct:    1 LPEQIDWRKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDKK-NHGCLGGAFVFAYQYIINNGGIDTQANYPYKAVQGPCQAASK 101          
BLAST of DY271123 vs. ExPASy Swiss-Prot
Match: CATH_MOUSE (Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 7.250e-34
Identity = 77/187 (41.18%), Postives = 111/187 (59.36%), Query Frame = 1
Query:  205 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKG-AVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFQFIIDNGGIDTKDDYPYKALDGSC 759
            F++W  +H K Y+++ E   R ++F +N R I  HN  N T+K+ LN+F+D++  E +  +L +          S     YL   G   P S+DWRKKG  V+ VK+QG+C SCW FST  A+E    I +G ++SL+EQ+LVDC  ++ N GC GGL   AF++I+ N GI  +D YPY   D SC
Sbjct:   33 FKSWMKQHQKTYSSV-EYNHRLQMFANNWRKIQAHNQRNHTFKMALNQFSDMSFAEIKHKFLWSE-----PQNCSATKSNYLRGTGP-YPSSMDWRKKGNVVSPVKNQGACASCWTFSTTGALESAVAIASGKMLSLAEQQLVDCAQAFNNHGCKGGLPSQAFEYILYNKGIMEEDSYPYIGKDSSC 212          
BLAST of DY271123 vs. ExPASy Swiss-Prot
Match: MEX2_JACME (Chymomexicain OS=Jacaratia mexicana PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.615e-33
Identity = 82/191 (42.93%), Postives = 106/191 (55.50%), Query Frame = 1
Query:  472 PDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFQFIIDNGGIDTKDDYPYKALDGSCDTYRKNAK*LQLMTMKMFPLNEKKALQKEIAK*PLEFGD*RRGHGISSLNKSGYIFGKKCG---DH-------------PRDPWGFPPLGNWGKK 996
            P+S+DWR KGAV  VK+Q  CGSCWAFST+A VEGINKI TG LISLSEQEL+DCD   + GC GG    + Q++ DNGG+ T+ +YPY+   G C    K    +Q+   K  P N++ +L + I   P+      +G     L K G IF   CG   DH              ++ WG     NWG+K
Sbjct:    2 PESIDWRDKGAVTPVKNQNPCGSCWAFSTVATVEGINKIRTGKLISLSEQELLDCDRR-SHGCKGGYQTGSIQYVADNGGVHTEKEYPYEKKQGKCRAKEKKGTKVQITGYKRVPANDEISLIQGIGNQPVSVLHESKGRAF-QLYKGG-IFNGPCGYKNDHAVTAIGYGKAQLLDKNSWG----PNWGEK 185          
BLAST of DY271123 vs. ExPASy Swiss-Prot
Match: CATV_GVXN (Viral cathepsin OS=Xestia c-nigrum granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 3.598e-33
Identity = 92/262 (35.11%), Postives = 136/262 (51.91%), Query Frame = 1
Query:   85 MFLLFLFTVS----SALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRV--GEA---LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFQFIIDNGGIDTKDDYPYKALDGSCDTYRKNAK*LQLMTMKMFPLNEKKALQK 843
            MFL ++F V+    +   +S ++YD ++  +            +F  + VK+ K Y    EKE RFEIFK NL  I+  N+   +    +N  AD+++ E      G +    R     K++    P V  G++   +PDS DWR + +V  VK Q  CGSCWAFS +A +E +  I     + LSEQ+LVDCD   N GCNGGLM +AF+ II  GGI  +  YPY  +DG C   +   + +QL     + L  +K L++
Sbjct:   11 MFLPWVFCVALLTLNVCAVSYIAYDMSNAQE------------LFNEFVVKYNKVYKDDQEKEARFEIFKQNLADINARNALEDSAMFEINSRADISSNELLQKLTGLKLSLMRGE---KKNSFCTPTVISGDSSGKVPDSFDWRDRNSVTSVKMQKECGSCWAFSAVANIESLYHIKHNVSLDLSEQQLVDCD-KVNNGCNGGLMSWAFEGIIRAGGISYEAPYPYTGVDGVC---KNTTRYVQLSGCYAYDLRSEKKLRQ 253          
The following BLAST results are available for this feature:
BLAST of DY271123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 157
Match NameE-valueIdentityDescription
CYSP2_HOMAM8.565e-3544.62Digestive cysteine proteinase 2 OS=Homarus america... [more]
LMCPB_LEIME1.461e-3442.86Cysteine proteinase B OS=Leishmania mexicana GN=LM... [more]
CYSP2_LEIPI1.461e-3442.86Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS... [more]
CYSP3_HOMAM1.908e-3442.39Digestive cysteine proteinase 3 OS=Homarus america... [more]
CATH_RAT1.908e-3441.71Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1[more]
CFAD_DICDI4.251e-3435.75Counting factor associated protein D OS=Dictyostel... [more]
ERVC_TABDI7.250e-3465.69Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=... [more]
CATH_MOUSE7.250e-3441.18Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1[more]
MEX2_JACME1.615e-3342.93Chymomexicain OS=Jacaratia mexicana PE=1 SV=1[more]
CATV_GVXN3.598e-3335.11Viral cathepsin OS=Xestia c-nigrum granulosis viru... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YO17FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271123 ID=DY271123; Name=DY271123; organism=Citrus clementina; type=EST; length=1197bp
CATCAATCCATCTTCTTCTCCCAAAAAGAAAAAAAAAAGCTCTTTTCTCC
AAAGATGGGTTTGTTCAGATCACCAACCATGGCCATGTTTTTACTTTTTC
TCTTCACTGTATCATCTGCCTTGGACATGTCGATTGTATCTTATGATAAA
ACCCATGAGTCAAAATCTAGCAGCTGGAGGACCGACGATGAGGTTATGGG
TATGTTCGAGGCCTGGTTTGTGAAGCATGGCAAGGCTTATAACGCTTTGG
GTGAAAAAGAGAAAAGGTTTGAGATCTTTAAGGACAATCTTAGGTTTATT
GATGAACATAACTCAGAGAACCGGACCTACAAGGTTGGGTTGAACCGGTT
TGCTGATTTGACCAACGAGGAGTACCGGTCCATGTATCTGGGTGCACGCT
TTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGCGATCGTTATCTG
CCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTGGAGGAAGAAAGG
AGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGAGTTGCTGGGCAT
TTTCAACCATTGCTGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGC
CTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAA
TGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCCAGTTCATTATTG
ATAATGGAGGTATTGACACAAAAGATGATTACCCCTACAAAGCCCTTGAT
GGTAGCTGTGACACATATCGGAAAAATGCCAAATAGTTACAATTGATGAC
TATGAAAATGTTCCCCCTAAATGAAAAAAAAGCTTTGCAAAAAGAAATTG
CAAAATAACCCCTTGAGTTTGGCGATTGAAGGAGGGGGCATGGCATTTCC
AGTTTAAATAAATCCGGGTATATTTTCGGGAAAAAATGTGGGGACCACCC
CCGGGACCCATGGGGTTTCCCGCCGTTGGGAAATTGGGGAAAAAAAAAAA
GGGACCCTGAATAAACGGGAATTGGTGAAAAAAATTACCGAGGGGCACAA
AATCCGCGGGAAAAAGGGGGGGTCCTATATTTTGAGAAGGTGGAATCCTC
AGAATTGGTCCCTGGCGACATCCCCTCCCGTGTCATAATTGTGGGTGAGA
ATTTTTCCCTTAATAGGGATAGACCCACTCCATATCCTTACCCAGTA
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