DY271143

Overview
NameDY271143
Unique NameDY271143
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1117
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271143 vs. ExPASy Swiss-Prot
Match: AQPZ_BORPA (Aquaporin Z OS=Bordetella parapertussis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.674e-21
Identity = 78/205 (38.05%), Postives = 100/205 (48.78%), Query Frame = 2
Query:  194 FYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGI--QGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAV-------VKGFQKSQYEMLGGGANMLSKG-YSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPLGFAVFLVHLATIPITGTSINPARSLGPAL 778
            F R G AEF  TF      VL   G +   +    VGI   G+A AFG  +  + Y    ISGGH NPAVT GL  + +        Y++ Q +GAI  AA        V GF     +    G    S G YS    L  EIV +   V+ +  ATD +  A        AP+P+G A+ L+HL +IP+T TS+NPARS GPAL
Sbjct:    5 FKRCG-AEFFGTFWL----VLGGCGSAVLAAGVPQVGIGYAGVALAFGLTVLTMAYAVGHISGGHFNPAVTVGLAASGRFGWRDVPPYIVAQVVGAIVAAATLASIAQGVAGFDLVASKFAANGYGDHSPGKYSMQAALICEIVLSAGFVFVILGATDKRAPAG------FAPIPIGLALTLIHLISIPVTNTSVNPARSTGPAL 198          
BLAST of DY271143 vs. ExPASy Swiss-Prot
Match: AQPZ_BORBR (Aquaporin Z OS=Bordetella bronchiseptica GN=aqpZ PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.674e-21
Identity = 78/205 (38.05%), Postives = 100/205 (48.78%), Query Frame = 2
Query:  194 FYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGI--QGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAV-------VKGFQKSQYEMLGGGANMLSKG-YSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPLGFAVFLVHLATIPITGTSINPARSLGPAL 778
            F R G AEF  TF      VL   G +   +    VGI   G+A AFG  +  + Y    ISGGH NPAVT GL  + +        Y++ Q +GAI  AA        V GF     +    G    S G YS    L  EIV +   V+ +  ATD +  A        AP+P+G A+ L+HL +IP+T TS+NPARS GPAL
Sbjct:    5 FKRCG-AEFFGTFWL----VLGGCGSAVLAAGVPQVGIGYAGVALAFGLTVLTMAYAVGHISGGHFNPAVTVGLAASGRFGWRDVPPYIVAQVVGAIVAAATLASIAQGVAGFDLVASKFAANGYGDHSPGKYSMQAALICEIVLSAGFVFVILGATDKRAPAG------FAPIPIGLALTLIHLISIPVTNTSVNPARSTGPAL 198          
BLAST of DY271143 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.855e-21
Identity = 70/203 (34.48%), Postives = 102/203 (50.25%), Query Frame = 2
Query:  200 RAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTV----GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGAN----MLSKGYSKGDGLGAEIVGTFVLVYTVF-SATDAKRNARDSHVPILAPLPLGFAVFLVHLATIPITGTSINPARSLGPALI 781
            RA I+EF+AT +F++    +V+ + K     ST+    G+  +A A    +   V     +SGGH+NPAVTFG  +  ++SL RAV Y   Q LGA+    +++        +  GGA      L+ G   G  +  E V TF  VY  + +  D KR     H+  +APL +GF +    LA  P  G  +NPAR  GPAL+
Sbjct:   28 RAAISEFIATAIFVFAAEGSVLSLGKMYHDHSTISTAGGLVAVALAHALGLAVAVAVAVNVSGGHVNPAVTFGALVGGRVSLVRAVLYWAAQLLGAVAATLLLR--------LATGGARPPGFALASGVGDGHAVLLEAVMTFGFVYAYYATVVDPKR----GHLGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALV 218          
BLAST of DY271143 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.855e-21
Identity = 70/202 (34.65%), Postives = 104/202 (51.49%), Query Frame = 2
Query:  200 RAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVG-IQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLG------AEIVGTFVLVYTVFSAT-DAKRNARDSHVPILAPLPLGFAVFLVHLATIPITGTSINPARSLGPALI 781
            RA I+EF+AT +F++    +++ + K     ST G +  ++ A    +   V     ISGGH+NPA+TFG  L  +LSL RA+FY + Q LGA+    +++        +  GG  M   G++   G+G       E   TF L+Y  ++   D KR     HV  +APL +GF +    LA  P  G  +NPAR  GPAL+
Sbjct:   27 RAAISEFLATAIFVFAAEGSILSLGKLYQDMSTPGGLVAVSLAHALALAVAVAVAVNISGGHVNPAITFGALLGGRLSLIRALFYWLAQLLGAVVATLLLR--------LTTGG--MRPPGFALASGVGDWHAVLLEATMTFGLMYAYYATVIDPKR----GHVGTIAPLAVGFLLGANMLAGGPFDGAGMNPARVFGPALV 214          
BLAST of DY271143 vs. ExPASy Swiss-Prot
Match: TIP22_MAIZE (Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.855e-21
Identity = 72/205 (35.12%), Postives = 111/205 (54.15%), Query Frame = 2
Query:  173 GELSSWSFYRAGIAEFVATFLFLYITVLTVM--GVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVF-SATDAKRNARDSHVPILAPLPLGFAVFLVHLATIPITGTSINPARSLGPAL 778
            G+  S +  +A +AEF+AT LF++  V + +  G   +       G+  IA A    +F  V   A  SGGH+NPAVTFGL +   +++   +FY + Q LGA     +++     +     G    +S G ++ +G+  EIV TF LVYTV+ +A D K+ +    +  +AP+ +GF V    LA  P +G S+NPARS GPA+
Sbjct:   10 GDSFSVTSIKAYVAEFIATLLFVFAGVGSAIAFGQLTNGGALDPAGLVAIAVAHALALFVGVSVAANTSGGHLNPAVTFGLAVGGHITVLTGLFYWVAQLLGASVACLLLRFVTHGKAIPTHG----VSGGTTELEGVVFEIVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAV 206          
BLAST of DY271143 vs. ExPASy Swiss-Prot
Match: MIP_HUMAN (Lens fiber major intrinsic protein OS=Homo sapiens GN=MIP PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.855e-21
Identity = 73/203 (35.96%), Postives = 103/203 (50.74%), Query Frame = 2
Query:  176 ELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGA-NMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPLGFAVFLVHLATIPITGTSINPARSLGPALI 781
            EL S SF+RA  AEF AT  +++  +      S  +     + +  +A AFG  +  LV     ISG H+NPAVTF   +  ++SL RA  YM  Q LGA+ GAAV+  +  +   + G  A N L    S G     EI  T   V  +F+  D +RN +   V     L +GF++ L HL  +  TG  +NPARS  PA++
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFGL-----GSSLRWAPGPLHVLQVAMAFGLALATLVQSVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVL--YSVTPPAVRGNLALNTLHPAVSVGQATTVEIFLTLQFVLCIFATYDERRNGQLGSV----ALAVGFSLALGHLFGMYYTGAGMNPARSFAPAIL 194          
BLAST of DY271143 vs. ExPASy Swiss-Prot
Match: AQP_DROME (Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 3.729e-21
Identity = 67/197 (34.01%), Postives = 105/197 (53.30%), Query Frame = 2
Query:  197 YRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG--GANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPLGFAVFLVHLATIPITGTSINPARSLGPALI 781
            +R  + E V TF  +++ V    G + S S      +  IA+ FG  +  +      +SG HINPAVT G  +  ++S+ +A FY+I+QC+GAI GAAV+K    +   + GG  G +      +    +  E + TF+LV+ V + +D  R      +   APL +G A+   HL  I ++G S+NPARS GPA++
Sbjct:   23 WRMLLGELVGTFFLIFVGV----GSTTSGS------VPQIAFTFGLTVATIAQGLGHLSGCHINPAVTLGFLIVGEISILKAAFYIIVQCVGAIAGAAVIK---VALDGVAGGDLGVSSFDPSLNCAQAVLIEALITFILVFVVKAVSDPGR----QDIKGSAPLAVGLAIAAGHLCAIKLSGASMNPARSFGPAVV 202          
BLAST of DY271143 vs. ExPASy Swiss-Prot
Match: TIPA_PHAVU (Probable aquaporin TIP-type alpha OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 4.870e-21
Identity = 71/203 (34.98%), Postives = 106/203 (52.22%), Query Frame = 2
Query:  200 RAGIAEFVATFLFLYITVLTVMGVSK--SKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGA------EIVGTFVLVYTVF-SATDAKRNARDSHVPILAPLPLGFAVFLVHLATIPITGTSINPARSLGPALI 781
            RA +AEF +TF+F++    + + + K    S  S   +  +A A    +FA V  +  +SGGH+NPAV+FG  +  ++S+ RAV+Y I Q LG+I  A V++              NM   G+    G+G       E+V TF L+YTV+ +A D KR A    V  +APL +G  V    L   P  G  +NPA + GP+L+
Sbjct:   21 RASLAEFASTFIFVFAGEGSGLALVKIYQDSAFSAGELLALALAHAFALFAAVSASMHVSGGHVNPAVSFGALIGGRISVIRAVYYWIAQLLGSIVAALVLRLVTN----------NMRPSGFHVSPGVGVGHMFILEVVMTFGLMYTVYGTAIDPKRGA----VSYIAPLAIGLIVGANILVGGPFDGACMNPALAFGPSLV 209          
BLAST of DY271143 vs. ExPASy Swiss-Prot
Match: AQPZ_GLOVI (Aquaporin Z OS=Gloeobacter violaceus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 4.870e-21
Identity = 73/212 (34.43%), Postives = 108/212 (50.94%), Query Frame = 2
Query:  191 SFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGI--QGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANM-LSKGY-SKGDGLGA------------EIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPLGFAVFLVHLATIPITGTSINPARSLGPAL 778
            S  +  +AEF+ TF      VL   G +   +    +GI   G++ AFG  +  + +    ISG HINPAV+ GL+ A++   T  + Y+  Q LG I GA V+       Y + GG A   LS G+ S G GL +            E+V TF+ +  +  +TD +           AP+ +G ++ L+HL +IP+T TS+NPARS GPAL
Sbjct:    2 SLVKRSVAEFIGTFWL----VLGGCGAAVLAAAFPNLGIGFAGVSLAFGLTLLTMAFAIGHISGCHINPAVSIGLWAAKRFPATELLPYIAAQVLGGIAGAGVL-------YLIAGGKAGFSLSGGFASNGYGLHSPGGYTLLACLVCEVVMTFMFLMIILGSTDRRAPKG------FAPIAIGLSLTLIHLISIPVTNTSVNPARSTGPAL 196          
BLAST of DY271143 vs. ExPASy Swiss-Prot
Match: AQPZ1_AGRT5 (Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=aqpZ1 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 4.870e-21
Identity = 64/167 (38.32%), Postives = 91/167 (54.49%), Query Frame = 2
Query:  299 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGF--QKSQYEMLGGGANMLSK----GYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPI-LAPLPLGFAVFLVHLATIPITGTSINPARSLGPAL 778
            +G  G+A+AFG  +  + Y   GISGGH NPAV+ GL +A K      V Y++ Q LGA+  AA +      K+  E+ G  AN   +    GYS    L  EI+ T   +  +  +T  +       VP+  AP+ +G A+ L+HL +IP+T TS+NPARS G AL
Sbjct:   34 IGFLGVAFAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGKFPAANLVPYIVAQVLGAVVAAAALYVILTGKAGAEIGGFAANGYGEHSPGGYSLLSALLIEIILTAFFLVVILGSTHGR-------VPVGFAPVAIGLALTLIHLISIPVTNTSVNPARSTGQAL 193          
The following BLAST results are available for this feature:
BLAST of DY271143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
AQPZ_BORPA1.674e-2138.05Aquaporin Z OS=Bordetella parapertussis GN=aqpZ PE... [more]
AQPZ_BORBR1.674e-2138.05Aquaporin Z OS=Bordetella bronchiseptica GN=aqpZ P... [more]
TIP32_MAIZE2.855e-2134.48Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1[more]
TIP31_ORYSJ2.855e-2134.65Probable aquaporin TIP3-1 OS=Oryza sativa subsp. j... [more]
TIP22_MAIZE2.855e-2135.12Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1[more]
MIP_HUMAN2.855e-2135.96Lens fiber major intrinsic protein OS=Homo sapiens... [more]
AQP_DROME3.729e-2134.01Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 ... [more]
TIPA_PHAVU4.870e-2134.98Probable aquaporin TIP-type alpha OS=Phaseolus vul... [more]
AQPZ_GLOVI4.870e-2134.43Aquaporin Z OS=Gloeobacter violaceus GN=aqpZ PE=3 ... [more]
AQPZ1_AGRT54.870e-2138.32Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YP18FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271143 ID=DY271143; Name=DY271143; organism=Citrus clementina; type=EST; length=1117bp
ACTTGAACCTATCTTGTCTATTAATTTTCACAAGAACATAATGGAGGGCA
AAGAAGAGGATGTAAGAGTGGGAGCAAATAGGTATCGAGAGAGTCAACCT
ATTGGAACCGCGGCTCAGACTCAGGATGTGAAGGATTACACGGAGCCACC
TCCGGCGCCGCTCTTTGAGCCCGGCGAATTATCGTCGTGGTCCTTTTACA
GGGCTGGCATTGCGGAGTTTGTGGCCACGTTCTTGTTTCTTTACATCACT
GTTCTAACAGTGATGGGCGTGTCCAAATCCAAAAGCAAATGTTCCACTGT
GGGAATCCAGGGCATCGCTTGGGCTTTTGGCGGCATGATCTTCGCTCTAG
TCTACTGCACTGCTGGCATTTCAGGGGGTCACATTAACCCAGCGGTGACA
TTCGGGCTGTTCTTGGCCCGAAAGCTGTCGCTTACCAGGGCAGTTTTTTA
CATGATAATGCAGTGTTTAGGGGCCATATGCGGTGCCGCCGTTGTAAAGG
GCTTTCAGAAAAGCCAATATGAAATGCTAGGCGGCGGTGCCAACATGCTC
AGCAAAGGCTACAGCAAGGGAGATGGCCTTGGAGCCGAGATTGTTGGTAC
CTTTGTTCTTGTTTACACTGTCTTCTCGGCCACTGATGCCAAGCGCAATG
CCCGCGATTCTCATGTTCCTATATTGGCACCCCTGCCCCTTGGATTTGCC
GTGTTTTTGGTGCACTTGGCAACCATTCCTATCACAGGAACCAGCATTAA
CCCAGCTAGGAGTCTTGGCCCAGCTCTGATATACAACAAGGGACCCAGCT
GGGGATGATCTTTGGATTTTCTGGGCCGGAACCTTCCATTGGAGCACCGC
TTGCGCTTTTATATCATCCGATTGGGGACCGGGCCCTCCCCTTCAGGCCC
AAGGACTAAGTCTTTATTTCCGACCCTTACATTTAAAACCCATGTAGGGG
ATTGAATTGCCCACCGGTCCCCGGGTTTTTCTTTTAATTTATCTGCCGTA
AAAGACAACAACCCTCGGGGGTTTCTGTGGTTCCTCAAATTGTGTTAAAA
ATTCTACCAATTTTCCCGGGCGCAATATCCCCTTTTCAAATATACATCTT
ATTGTGTTTCCTTCGTT
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