DY271143

Overview
NameDY271143
Unique NameDY271143
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1117
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271143 vs. ExPASy Swiss-Prot
Match: MIP_BOVIN (Lens fiber major intrinsic protein OS=Bos taurus GN=MIP PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.984e-23
Identity = 92/269 (34.20%), Postives = 130/269 (48.33%), Query Frame = 2
Query:  176 ELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGA-NMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPLGFAVFLVHLATIPITGTSINPARSLGPAL---------IYNKGPSWG*SLDFLGRNLPLEHRLRFYIIRL----GTGPSPSGPRTKSLFPTLTFKT 940
            EL S SF+RA  AEF A+  +++      +G S   +    + +  +A AFG  +  LV     ISG H+NPAVTF   +  ++SL RA+ YM+ Q LGA+ GAAV+  +  +   + G  A N L  G S G     EI  T   V  +F+  D +RN R   V     L +GF++ L HL  +  TG  +NPARS  PA+         +Y  GP  G  L  L  +  L  RL+    RL    G+ PS S  + +     +  KT
Sbjct:    3 ELRSASFWRAICAEFFASLFYVFFG----LGASLRWAP-GPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVL--YSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPRLKSVSERLSILKGSRPSESNGQPEVTGEPVELKT 260          
BLAST of DY271143 vs. ExPASy Swiss-Prot
Match: AQP2_RAT (Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.304e-23
Identity = 76/206 (36.89%), Postives = 108/206 (52.43%), Query Frame = 2
Query:  176 ELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG-GANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPLGFAVFLVHLATIPITGTSINPARSLGPALIYNK 790
            EL S +F RA +AEF+AT LF++  + + +  + S        +  IA AFG  I  LV     +SG HINPAVT    +   +S  RA FY+  Q LGA+ GAA++   + +  E+ G    N L    + G  +  E+  T  LV  +F++TD +R            L +GF+V L HL  I  TG S+NPARSL PA++  K
Sbjct:    3 ELRSIAFSRAVLAEFLATLLFVFFGLGSALQWASSPPS-----VLQIAVAFGLGIGILVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAAIL--HEITPVEIRGDLAVNALHNNATAGQAVTVELFLTMQLVLCIFASTDERRGDNLGS----PALSIGFSVTLGHLLGIYFTGCSMNPARSLAPAVVTGK 197          

HSP 2 Score: 21.9422 bits (45), Expect = 4.304e-23
Identity = 6/9 (66.67%), Postives = 7/9 (77.78%), Query Frame = 3
Query:  804 DDLWIFWAG 830
            DD W+FW G
Sbjct:  199 DDHWVFWIG 207          
BLAST of DY271143 vs. ExPASy Swiss-Prot
Match: AQP2_BOVIN (Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 4.304e-23
Identity = 75/206 (36.41%), Postives = 109/206 (52.91%), Query Frame = 2
Query:  176 ELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG-GANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPLGFAVFLVHLATIPITGTSINPARSLGPALIYNK 790
            EL S +F RA +AEF+AT LF++  + + +   ++        +  IA AFG  I  LV     +SG HINPAVT    +   +S  RAVFY+  Q LGA+ GAA++   + +   + G    N L+   + G  +  E+  T  LV  +F++TD +R            L +GF+V L HL  I  TG S+NPARSL PA++  K
Sbjct:    3 ELRSIAFSRAVLAEFLATLLFVFFGLGSALNWPQALPS-----VLQIAMAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAVFYVAAQLLGAVAGAALL--HEITPPAIRGDLAVNALNNNSTAGQAVTVELFLTLQLVLCIFASTDERRGDNVG----TPALSIGFSVALGHLLGIHYTGCSMNPARSLAPAIVTGK 197          

HSP 2 Score: 21.9422 bits (45), Expect = 4.304e-23
Identity = 6/9 (66.67%), Postives = 7/9 (77.78%), Query Frame = 3
Query:  804 DDLWIFWAG 830
            DD W+FW G
Sbjct:  199 DDHWVFWIG 207          
BLAST of DY271143 vs. ExPASy Swiss-Prot
Match: TIP12_MAIZE (Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 8.875e-23
Identity = 75/210 (35.71%), Postives = 111/210 (52.86%), Query Frame = 2
Query:  170 PGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSK--SKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG---GANMLSKGYSKGDGLGAEIVGTFVLVYTVF-SATDAKRNARDSHVPILAPLPLGFAVFLVHLATIPITGTSINPARSLGPALI 781
            PGELS     +A +AEF++T +F++    + M  SK       +  G+   + A    +F  V   A ISGGH+NPAVTFG F+   +SL +A+ Y + Q LG++    ++K          GG   GA  LS G    + +  E+V TF LVYTV+ +A D K+      + ++AP+ +GF V    LA     G S+NPA S GPA++
Sbjct:   11 PGELSHPDTAKAAVAEFISTLIFVFAGSGSGMAFSKLTDGGAATPAGLIAASLAHALALFVAVSVGANISGGHVNPAVTFGAFVGGNISLLKALVYWVAQLLGSVVACLLLK-------IATGGAALGAFSLSAGVGAMNAVVLEMVMTFGLVYTVYATAVDPKK----GDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV 209          
BLAST of DY271143 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.159e-22
Identity = 76/205 (37.07%), Postives = 111/205 (54.15%), Query Frame = 2
Query:  173 GELSSWSFYRAGIAEFVATFLFLYITVLTVM--GVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVF-SATDAKRNARDSHVPILAPLPLGFAVFLVHLATIPITGTSINPARSLGPAL 778
            G+  S +  +A +AEF+AT LF++  V + +  G   +       G+  IA A    +F  V   A ISGGH+NPAVTFGL +   +++   +FY I Q LGA     ++K     +     G A     G S+ +G+  EIV TF LVYTV+ +A D K+ +    +  +AP+ +GF V    LA  P +G S+NPARS GPA+
Sbjct:   10 GDSFSATSVKAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGLFYWIAQLLGASIACLLLKFVTHGKAIPTHGVA-----GISELEGVVMEIVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAV 205          
BLAST of DY271143 vs. ExPASy Swiss-Prot
Match: MIP_RAT (Lens fiber major intrinsic protein (Fragment) OS=Rattus norvegicus GN=Mip PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 1.159e-22
Identity = 91/269 (33.83%), Postives = 126/269 (46.84%), Query Frame = 2
Query:  176 ELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGA-NMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPLGFAVFLVHLATIPITGTSINPARSLGPAL---------IYNKGPSWG*SLDFLGRNLPLEHRLRFYIIRL----GTGPSPSGPRTKSLFPTLTFKT 940
            EL S SF+RA  AEF AT  +++  +      S  +     + +  +A AFG  +  LV     ISG H+NPAVTF   +  ++SL RA  Y+  Q LGA+ GAAV+  +  +   + G  A N L  G S G     EI  T   V  +F+  D +RN R   V     L +GF++ L HL  +  TG  +NPARS  PA+         +Y  GP  G  L  L  +  L  RL+    RL    G  PS S  + +     +  KT
Sbjct:    1 ELRSASFWRAIFAEFFATLFYVFFGL-----GSSLRWAPGPLHVLQVALAFGLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVL--YSVTPPAVRGNLALNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFSNHWVYWVGPIIGGGLGSLLYDFLLFPRLKSVSERLSILKGARPSDSNGQPEGTGEPVELKT 258          
BLAST of DY271143 vs. ExPASy Swiss-Prot
Match: MIP_MOUSE (Lens fiber major intrinsic protein OS=Mus musculus GN=Mip PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 1.159e-22
Identity = 92/269 (34.20%), Postives = 127/269 (47.21%), Query Frame = 2
Query:  176 ELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGA-NMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPLGFAVFLVHLATIPITGTSINPARSLGPAL---------IYNKGPSWG*SLDFLGRNLPLEHRLRFYIIRL----GTGPSPSGPRTKSLFPTLTFKT 940
            EL S SF+RA  AEF AT  +++      +G S   +    + +  +A AFG  +  LV     ISG H+NPAVTF   +  ++SL RA  Y+  Q LGA+ GAAV+  +  +   + G  A N L  G S G     EI  T   V  +F+  D +RN R   V     L +GF++ L HL  +  TG  +NPARS  PA+         +Y  GP  G  L  L  +  L  RL+    RL    G  PS S  + +     +  KT
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWAP-GPLHVLQVALAFGLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVL--YSVTPPAVRGNLALNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFSNHWVYWVGPIIGGGLGSLLYDFLLFPRLKSVSERLSILKGARPSDSNGQPEGTGEPVELKT 260          
BLAST of DY271143 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 1.977e-22
Identity = 74/207 (35.75%), Postives = 112/207 (54.11%), Query Frame = 2
Query:  170 PGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSK--SKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFS-ATDAKRNARDSHVPILAPLPLGFAVFLVHLATIPITGTSINPARSLGPALI 781
            P E +     +AG+AEF++TF+F++    + +  +K  +    +  G+   + A    +F  V   A ISGGH+NPAV FG F+   ++L R + Y+I Q LG+I  +A++     S     G     LS+G   G  L  EIV TF LVYTV++ A D K+     ++ I+AP+ +GF V    L     TG S+NPA S GPA++
Sbjct:   11 PQEATHPDTLKAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAV-FGAFVGGNITLLRGIVYIIAQLLGSIVCSALLVFVTASSVPAFG-----LSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKKG----NIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVV 207          
BLAST of DY271143 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.719e-22
Identity = 69/202 (34.16%), Postives = 107/202 (52.97%), Query Frame = 2
Query:  200 RAGIAEFVATFLFLYITVLTVMGVSK-------SKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSA-TDAKRNARDSHVPILAPLPLGFAVFLVHLATIPITGTSINPARSLGPALI 781
            RA +AEF++TF+F++    +++ + K            +  G+  +A A    +FA V     +SGGH+NPAVTFG  +  +++  RA++Y I Q LGAI    +++        +       L+ G    +GL  EI+ TF LVY V+S   D KR +    + I+APL +G  V    L   P +G S+NPAR+ GPAL+
Sbjct:   24 RATLAEFLSTFVFVFAAEGSILSLDKLYWEHAAHAGTNTPGGLILVALAHAFALFAAVSAAINVSGGHVNPAVTFGALVGGRVTAIRAIYYWIAQLLGAILACLLLRLTTNGMRPV----GFRLASGVGAVNGLVLEIILTFGLVYVVYSTLIDPKRGS----LGIIAPLAIGLIVGANILVGGPFSGASMNPARAFGPALV 217          

HSP 2 Score: 23.483 bits (49), Expect = 2.719e-22
Identity = 9/19 (47.37%), Postives = 10/19 (52.63%), Query Frame = 3
Query:  807 DLWIFWAGTFHWSTACAFI 863
            D WI+W G F  S   A I
Sbjct:  223 DHWIYWVGPFIGSALAALI 241          
BLAST of DY271143 vs. ExPASy Swiss-Prot
Match: MIP_CAVPO (Lens fiber major intrinsic protein OS=Cavia porcellus GN=MIP PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 3.372e-22
Identity = 92/269 (34.20%), Postives = 127/269 (47.21%), Query Frame = 2
Query:  176 ELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGA-NMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPLGFAVFLVHLATIPITGTSINPARSLGPAL---------IYNKGPSWG*SLDFLGRNLPLEHRLRFYIIRL----GTGPSPSGPRTKSLFPTLTFKT 940
            EL S SF+RA  AEF AT  +++      +G S   +    + +  +A AFG  +  LV     ISG H+NPAVTF   +  ++SL RA  YM  Q LGA+ GAAV+  +  +   + G  A N L  G S       EI  T   V  +F+  D +RN R   V     L +GF++ L HL  +  TG  +NPARS  PA+         +Y  GP  G  L  L  +  L  RL+    RL    GT PS +  + +     +  KT
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWAP-GPLHVLQVALAFGLALAXLVQTVGHISGAHVNPAVTFXFLVGSQMSLLRAFCYMAAQLLGAVAGAAVL--YSVTPPAVRGNLALNTLHAGVSVXQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPIIGGGLGSLLYDFLLFPRLKSVSERLSILKGTRPSDNNGQPEGTGEPVELKT 260          
The following BLAST results are available for this feature:
BLAST of DY271143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
MIP_BOVIN3.984e-2334.20Lens fiber major intrinsic protein OS=Bos taurus G... [more]
AQP2_RAT4.304e-2336.89Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1[more]
AQP2_BOVIN4.304e-2336.41Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2[more]
TIP12_MAIZE8.875e-2335.71Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1[more]
TIP21_ORYSJ1.159e-2237.07Probable aquaporin TIP2-1 OS=Oryza sativa subsp. j... [more]
MIP_RAT1.159e-2233.83Lens fiber major intrinsic protein (Fragment) OS=R... [more]
MIP_MOUSE1.159e-2234.20Lens fiber major intrinsic protein OS=Mus musculus... [more]
TIP1_MEDSA1.977e-2235.75Probable aquaporin TIP-type OS=Medicago sativa GN=... [more]
TIP31_ARATH2.719e-2234.16Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1... [more]
MIP_CAVPO3.372e-2234.20Lens fiber major intrinsic protein OS=Cavia porcel... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YP18FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271143 ID=DY271143; Name=DY271143; organism=Citrus clementina; type=EST; length=1117bp
ACTTGAACCTATCTTGTCTATTAATTTTCACAAGAACATAATGGAGGGCA
AAGAAGAGGATGTAAGAGTGGGAGCAAATAGGTATCGAGAGAGTCAACCT
ATTGGAACCGCGGCTCAGACTCAGGATGTGAAGGATTACACGGAGCCACC
TCCGGCGCCGCTCTTTGAGCCCGGCGAATTATCGTCGTGGTCCTTTTACA
GGGCTGGCATTGCGGAGTTTGTGGCCACGTTCTTGTTTCTTTACATCACT
GTTCTAACAGTGATGGGCGTGTCCAAATCCAAAAGCAAATGTTCCACTGT
GGGAATCCAGGGCATCGCTTGGGCTTTTGGCGGCATGATCTTCGCTCTAG
TCTACTGCACTGCTGGCATTTCAGGGGGTCACATTAACCCAGCGGTGACA
TTCGGGCTGTTCTTGGCCCGAAAGCTGTCGCTTACCAGGGCAGTTTTTTA
CATGATAATGCAGTGTTTAGGGGCCATATGCGGTGCCGCCGTTGTAAAGG
GCTTTCAGAAAAGCCAATATGAAATGCTAGGCGGCGGTGCCAACATGCTC
AGCAAAGGCTACAGCAAGGGAGATGGCCTTGGAGCCGAGATTGTTGGTAC
CTTTGTTCTTGTTTACACTGTCTTCTCGGCCACTGATGCCAAGCGCAATG
CCCGCGATTCTCATGTTCCTATATTGGCACCCCTGCCCCTTGGATTTGCC
GTGTTTTTGGTGCACTTGGCAACCATTCCTATCACAGGAACCAGCATTAA
CCCAGCTAGGAGTCTTGGCCCAGCTCTGATATACAACAAGGGACCCAGCT
GGGGATGATCTTTGGATTTTCTGGGCCGGAACCTTCCATTGGAGCACCGC
TTGCGCTTTTATATCATCCGATTGGGGACCGGGCCCTCCCCTTCAGGCCC
AAGGACTAAGTCTTTATTTCCGACCCTTACATTTAAAACCCATGTAGGGG
ATTGAATTGCCCACCGGTCCCCGGGTTTTTCTTTTAATTTATCTGCCGTA
AAAGACAACAACCCTCGGGGGTTTCTGTGGTTCCTCAAATTGTGTTAAAA
ATTCTACCAATTTTCCCGGGCGCAATATCCCCTTTTCAAATATACATCTT
ATTGTGTTTCCTTCGTT
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