DY271143

Overview
NameDY271143
Unique NameDY271143
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1117
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271143 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 4.611e-22
Identity = 70/206 (33.98%), Postives = 110/206 (53.40%), Query Frame = 2
Query:  173 GELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSK--SKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVF-SATDAKRNARDSHVPILAPLPLGFAVFLVHLATIPITGTSINPARSLGPALI 781
            G+  S    +A +AEF+AT LF++  V + +  +K  + +     G+  +A A    +F  V   A ISGGH+NPAVT GL +   +++    FY I Q LG+     ++K         L    + ++ G +   G+  EI+ TF LVYTV+ +A D K+ +    +  +AP+ +GF V    LA  P +G S+NPARS GPA++
Sbjct:   10 GDSFSVGSLKAYVAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVTNG----LAVPTHGVAAGLNGFQGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVV 207          

HSP 2 Score: 21.557 bits (44), Expect = 4.611e-22
Identity = 8/20 (40.00%), Postives = 9/20 (45.00%), Query Frame = 3
Query:  813 WIFWAGTFHWSTACAFISSD 872
            WI+WAG         FI  D
Sbjct:  215 WIYWAGPLIGGGLAGFIYGD 234          
BLAST of DY271143 vs. ExPASy Swiss-Prot
Match: TIP31_MAIZE (Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 5.753e-22
Identity = 72/202 (35.64%), Postives = 104/202 (51.49%), Query Frame = 2
Query:  200 RAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVG-IQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLG------AEIVGTFVLVYTVFSAT-DAKRNARDSHVPILAPLPLGFAVFLVHLATIPITGTSINPARSLGPALI 781
            RA I+EF+AT +F++    +V+ + K     ST G +  +A A    +   V     ISGGH+NPAVTFG  +  ++SL RAV Y + Q LGA+    +++        +  GG  M   G++   G+G       E V TF L+Y  ++   D KR     HV  +APL +GF +    LA  P  G  +NPAR  GPAL+
Sbjct:   26 RAAISEFIATAIFVFAAEGSVLSLGKMYHDMSTAGGLVAVALAHALALAVAVAVAVNISGGHVNPAVTFGALVGGRVSLVRAVLYWVAQLLGAVAATLLLR--------LATGG--MRPPGFALASGVGDWHAVLLEAVMTFGLMYAYYATVIDPKR----GHVGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALV 213          
BLAST of DY271143 vs. ExPASy Swiss-Prot
Match: AQPZ2_RHIME (Aquaporin Z 2 OS=Rhizobium meliloti GN=aqpZ2 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 5.753e-22
Identity = 63/166 (37.95%), Postives = 92/166 (55.42%), Query Frame = 2
Query:  299 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAV--VKGFQKSQYEMLGGGANMLSK----GYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPLGFAVFLVHLATIPITGTSINPARSLGPAL 778
            +G+ G+++AFG  +  + Y   GISGGH NPAV+ GL +A ++     V Y+I Q  GAI  AAV  V    K+ +++    AN   +    GYS    L  E+V TF  +  +  +T  +  A        AP+ +G A+ L+HL +IP+T TS+NPARS G AL
Sbjct:   34 IGLLGVSFAFGLTVLTMAYTVGGISGGHFNPAVSLGLAVAGRVPAASLVSYVIAQVAGAIIAAAVLYVIATGKADFQLGSFAANGYGEHSPGGYSLTAALVTEVVMTFFFLIIILGSTHRRVPAG------FAPIAIGLALTLIHLVSIPVTNTSVNPARSTGQAL 193          
BLAST of DY271143 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.999e-22
Identity = 70/206 (33.98%), Postives = 110/206 (53.40%), Query Frame = 2
Query:  173 GELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSK--SKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVF-SATDAKRNARDSHVPILAPLPLGFAVFLVHLATIPITGTSINPARSLGPALI 781
            G+  S    +A +AEF+AT LF++  V + +  +K  + +     G+  +A A    +F  V   A ISGGH+NPAVT GL +   +++    FY I Q LG+     ++K         L    + ++ G +   G+  EI+ TF LVYTV+ +A D K+ +    +  +AP+ +GF V    LA  P +G S+NPARS GPA++
Sbjct:   10 GDSFSVGSLKAYVAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVTNG----LAVPTHGVAAGLNGLQGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVV 207          

HSP 2 Score: 21.557 bits (44), Expect = 5.999e-22
Identity = 8/20 (40.00%), Postives = 9/20 (45.00%), Query Frame = 3
Query:  813 WIFWAGTFHWSTACAFISSD 872
            WI+WAG         FI  D
Sbjct:  215 WIYWAGPLIGGGLAGFIYGD 234          
BLAST of DY271143 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 7.513e-22
Identity = 75/205 (36.59%), Postives = 111/205 (54.15%), Query Frame = 2
Query:  173 GELSSWSFYRAGIAEFVATFLFLYITVLTVM--GVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVF-SATDAKRNARDSHVPILAPLPLGFAVFLVHLATIPITGTSINPARSLGPAL 778
            G+  S +  +A +AEF+AT LF++  V + +  G   +       G+  IA A    +F  V   A ISGGH+NPAVTFGL +   +++   VFY + Q LGA   A ++ GF      +          G S+ +G+  E+V TF LVYTV+ +A D K+ +    +  +AP+ +GF V    LA  P +G S+NPARS GPA+
Sbjct:   10 GDSFSATSIKAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGVFYWVAQLLGATV-ACLLLGFVTHGKAI----PTHAVAGISELEGVVFEVVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAV 205          
BLAST of DY271143 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUAB (Aquaporin Z OS=Brucella abortus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 9.812e-22
Identity = 61/170 (35.88%), Postives = 88/170 (51.76%), Query Frame = 2
Query:  299 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGG------ANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPLGFAVFLVHLATIPITGTSINPARSLGPALIYNK 790
            +G  G+A AFG  +  + Y   GISGGH NPAV+ GL +A +L     + Y + Q LGAI  AA++      +     GG        +   GYS   GL  EI+ T   +  +  +T +   A        AP+ +GF + L+HL +IP+T TS+NPARS G AL  ++
Sbjct:   34 IGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLIHLVSIPVTNTSVNPARSTGVALFADR 197          
BLAST of DY271143 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUA2 (Aquaporin Z OS=Brucella abortus (strain 2308) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 9.812e-22
Identity = 61/170 (35.88%), Postives = 88/170 (51.76%), Query Frame = 2
Query:  299 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGG------ANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPLGFAVFLVHLATIPITGTSINPARSLGPALIYNK 790
            +G  G+A AFG  +  + Y   GISGGH NPAV+ GL +A +L     + Y + Q LGAI  AA++      +     GG        +   GYS   GL  EI+ T   +  +  +T +   A        AP+ +GF + L+HL +IP+T TS+NPARS G AL  ++
Sbjct:   34 IGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLIHLVSIPVTNTSVNPARSTGVALFADR 197          
BLAST of DY271143 vs. ExPASy Swiss-Prot
Match: AQPZ1_RHIME (Aquaporin Z 1 OS=Rhizobium meliloti GN=aqpZ1 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 9.812e-22
Identity = 63/167 (37.72%), Postives = 93/167 (55.69%), Query Frame = 2
Query:  299 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAV--VKGFQKSQYEMLGGGANMLSK----GYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPI-LAPLPLGFAVFLVHLATIPITGTSINPARSLGPAL 778
            +G+ G+++AFG  +  + Y   GISGGH NPAV+ GL +A ++     V Y++ Q  GAI  AAV  V    K+ +++ G  AN   +    GYS    L  E+V T   +  +  +T        S VP+  AP+ +G  + L+HL +IP+T TS+NPARS G AL
Sbjct:   34 IGLLGVSFAFGLTVLTMAYAVGGISGGHFNPAVSVGLAVAGRMPPASLVGYILAQVTGAIAAAAVLYVIASGKADFQLGGFAANGYGEHSPGGYSLTAALVTEVVMTAFFLLIILGST-------HSRVPVGFAPIAIGLGLTLIHLVSIPVTNTSVNPARSTGQAL 193          
BLAST of DY271143 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.282e-21
Identity = 69/206 (33.50%), Postives = 110/206 (53.40%), Query Frame = 2
Query:  200 RAGIAEFVATFLFLYITVLTVMGVSK-------SKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVK----GFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFS-ATDAKRNARDSHVPILAPLPLGFAVFLVHLATIPITGTSINPARSLGPALI 781
            RA +AEF++TF+F++    +++ + K            +  G+  +A A    +FA V     +SGGH+NPAVTF   +  ++S+ RA++Y + Q +GAI    +++    G +   +         ++ G S+  GL  EI+ TF LVY V+S A D KR +    + I+APL +G  V    L   P  G S+NPAR+ GPAL+
Sbjct:   24 RATLAEFLSTFVFVFAGEGSILALDKLYWDTAAHTGTNTPGGLVLVALAHALALFAAVSAAINVSGGHVNPAVTFAALIGGRISVIRAIYYWVAQLIGAILACLLLRLATNGLRPVGFH--------VASGVSELHGLLMEIILTFALVYVVYSTAIDPKRGS----IGIIAPLAIGLIVGANILVGGPFDGASMNPARAFGPALV 217          
BLAST of DY271143 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 1.282e-21
Identity = 71/196 (36.22%), Postives = 105/196 (53.57%), Query Frame = 2
Query:  200 RAGIAEFVATFLFLYITVLTVMGVSK--SKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVF-SATDAKRNARDSHVPILAPLPLGFAVFLVHLATIPITGTSINPARSLGPAL 778
            +A +AEF+AT LF++  V + +  S+          G+  IA A    +F  V   A ISGGH+NPAVTFGL +   +++   + Y + Q LGA     +++     Q     G       G S+ +G+  EIV TF LVYTV+ +A D K+ +    +  +AP+ +GF V    LA  P +G S+NPARS GPA+
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYSQLTKGGALDPAGLVAIAIAHAFALFVGVSMAANISGGHLNPAVTFGLAVGGHITILTGILYWVAQLLGASVACFLLQYVTHGQAIPTHG-----VSGISEIEGVVMEIVITFALVYTVYATAADPKKGS----LGTIAPMAIGFIVGANILAAGPFSGGSMNPARSFGPAV 205          
The following BLAST results are available for this feature:
BLAST of DY271143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
TIP2_TOBAC4.611e-2233.98Probable aquaporin TIP-type RB7-18C OS=Nicotiana t... [more]
TIP31_MAIZE5.753e-2235.64Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1[more]
AQPZ2_RHIME5.753e-2237.95Aquaporin Z 2 OS=Rhizobium meliloti GN=aqpZ2 PE=3 ... [more]
TIP1_TOBAC5.999e-2233.98Probable aquaporin TIP-type RB7-5A OS=Nicotiana ta... [more]
TIP21_MAIZE7.513e-2236.59Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1[more]
AQPZ_BRUAB9.812e-2235.88Aquaporin Z OS=Brucella abortus GN=aqpZ PE=3 SV=1[more]
AQPZ_BRUA29.812e-2235.88Aquaporin Z OS=Brucella abortus (strain 2308) GN=a... [more]
AQPZ1_RHIME9.812e-2237.72Aquaporin Z 1 OS=Rhizobium meliloti GN=aqpZ1 PE=3 ... [more]
TIP32_ARATH1.282e-2133.50Probable aquaporin TIP3-2 OS=Arabidopsis thaliana ... [more]
TIP23_MAIZE1.282e-2136.22Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YP18FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271143 ID=DY271143; Name=DY271143; organism=Citrus clementina; type=EST; length=1117bp
ACTTGAACCTATCTTGTCTATTAATTTTCACAAGAACATAATGGAGGGCA
AAGAAGAGGATGTAAGAGTGGGAGCAAATAGGTATCGAGAGAGTCAACCT
ATTGGAACCGCGGCTCAGACTCAGGATGTGAAGGATTACACGGAGCCACC
TCCGGCGCCGCTCTTTGAGCCCGGCGAATTATCGTCGTGGTCCTTTTACA
GGGCTGGCATTGCGGAGTTTGTGGCCACGTTCTTGTTTCTTTACATCACT
GTTCTAACAGTGATGGGCGTGTCCAAATCCAAAAGCAAATGTTCCACTGT
GGGAATCCAGGGCATCGCTTGGGCTTTTGGCGGCATGATCTTCGCTCTAG
TCTACTGCACTGCTGGCATTTCAGGGGGTCACATTAACCCAGCGGTGACA
TTCGGGCTGTTCTTGGCCCGAAAGCTGTCGCTTACCAGGGCAGTTTTTTA
CATGATAATGCAGTGTTTAGGGGCCATATGCGGTGCCGCCGTTGTAAAGG
GCTTTCAGAAAAGCCAATATGAAATGCTAGGCGGCGGTGCCAACATGCTC
AGCAAAGGCTACAGCAAGGGAGATGGCCTTGGAGCCGAGATTGTTGGTAC
CTTTGTTCTTGTTTACACTGTCTTCTCGGCCACTGATGCCAAGCGCAATG
CCCGCGATTCTCATGTTCCTATATTGGCACCCCTGCCCCTTGGATTTGCC
GTGTTTTTGGTGCACTTGGCAACCATTCCTATCACAGGAACCAGCATTAA
CCCAGCTAGGAGTCTTGGCCCAGCTCTGATATACAACAAGGGACCCAGCT
GGGGATGATCTTTGGATTTTCTGGGCCGGAACCTTCCATTGGAGCACCGC
TTGCGCTTTTATATCATCCGATTGGGGACCGGGCCCTCCCCTTCAGGCCC
AAGGACTAAGTCTTTATTTCCGACCCTTACATTTAAAACCCATGTAGGGG
ATTGAATTGCCCACCGGTCCCCGGGTTTTTCTTTTAATTTATCTGCCGTA
AAAGACAACAACCCTCGGGGGTTTCTGTGGTTCCTCAAATTGTGTTAAAA
ATTCTACCAATTTTCCCGGGCGCAATATCCCCTTTTCAAATATACATCTT
ATTGTGTTTCCTTCGTT
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