DY271152

Overview
NameDY271152
Unique NameDY271152
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1005
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY271152 vs. ExPASy Swiss-Prot
Match: ARF5_RAT (ADP-ribosylation factor 5 OS=Rattus norvegicus GN=Arf5 PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 1.109e-21
Identity = 71/151 (47.02%), Postives = 92/151 (60.93%), Query Frame = 2 
Query:   74 AAGNTSTLDYRVRL-DIVTAVPTFDFCMQTVEYQNINCPVGDVGGKELIRPLGTH*ILFTHWLIFVVVNVDRDRVGESLHERHRMLHDDELRDAGLLVFAD*QSSSRCRAAPLRPLI-SLVLPLFFNATGTYFSCCATSGEGHY*VLEWVS 520
            AAG T+ L Y+++L +IVT +PT  F ++TVEY+NI   V DVGG++ IRPL  H    T  LIFVV + DR+RV ES  E  +ML +DELRDA LLVFA+ Q      A P+  L   L L    + T    + CAT G G Y  L+W+S
Sbjct:   27 AAGKTTIL-YKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAVLLVFANKQDMP--NAMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDGLDWLS 174
[Close]
BLAST of DY271152 vs. ExPASy Swiss-Prot
Match: ARF5_MOUSE (ADP-ribosylation factor 5 OS=Mus musculus GN=Arf5 PE=2 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 1.109e-21
Identity = 71/151 (47.02%), Postives = 92/151 (60.93%), Query Frame = 2 
Query:   74 AAGNTSTLDYRVRL-DIVTAVPTFDFCMQTVEYQNINCPVGDVGGKELIRPLGTH*ILFTHWLIFVVVNVDRDRVGESLHERHRMLHDDELRDAGLLVFAD*QSSSRCRAAPLRPLI-SLVLPLFFNATGTYFSCCATSGEGHY*VLEWVS 520
            AAG T+ L Y+++L +IVT +PT  F ++TVEY+NI   V DVGG++ IRPL  H    T  LIFVV + DR+RV ES  E  +ML +DELRDA LLVFA+ Q      A P+  L   L L    + T    + CAT G G Y  L+W+S
Sbjct:   27 AAGKTTIL-YKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAVLLVFANKQDMP--NAMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDGLDWLS 174
[Close]
BLAST of DY271152 vs. ExPASy Swiss-Prot
Match: ARF5_HUMAN (ADP-ribosylation factor 5 OS=Homo sapiens GN=ARF5 PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 1.109e-21
Identity = 71/151 (47.02%), Postives = 92/151 (60.93%), Query Frame = 2 
Query:   74 AAGNTSTLDYRVRL-DIVTAVPTFDFCMQTVEYQNINCPVGDVGGKELIRPLGTH*ILFTHWLIFVVVNVDRDRVGESLHERHRMLHDDELRDAGLLVFAD*QSSSRCRAAPLRPLI-SLVLPLFFNATGTYFSCCATSGEGHY*VLEWVS 520
            AAG T+ L Y+++L +IVT +PT  F ++TVEY+NI   V DVGG++ IRPL  H    T  LIFVV + DR+RV ES  E  +ML +DELRDA LLVFA+ Q      A P+  L   L L    + T    + CAT G G Y  L+W+S
Sbjct:   27 AAGKTTIL-YKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAVLLVFANKQDMP--NAMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDGLDWLS 174
[Close]
BLAST of DY271152 vs. ExPASy Swiss-Prot
Match: ARF1_XENLA (ADP-ribosylation factor 1 OS=Xenopus laevis GN=arf1 PE=2 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 1.109e-21
Identity = 71/156 (45.51%), Postives = 95/156 (60.90%), Query Frame = 2 
Query:   74 AAGNTSTLDYRVRL-DIVTAVPTFDFCMQTVEYQNINCPVGDVGGKELIRPLGTH*ILFTHWLIFVVVNVDRDRVGESLHERHRMLHDDELRDAGLLVFAD*QS-SSRCRAAPLRPLISLVLPLFFNATGTYFSCCATSGEGHY*VLEWVSQCTTN 535
            AAG T+ L Y+++L +IVT +PT  F ++TVEY+NI+  V DVGG++ IRPL  H    T  LIFVV + DR+RV E+  E  RML +DELRDA LLVFA+ Q   +   AA +     L L    +      + CATSG+G Y  L+W+S    N
Sbjct:   27 AAGKTTIL-YKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITD--KLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRN 179
[Close]
BLAST of DY271152 vs. ExPASy Swiss-Prot
Match: ARF1_RAT (ADP-ribosylation factor 1 OS=Rattus norvegicus GN=Arf1 PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 1.109e-21
Identity = 71/156 (45.51%), Postives = 95/156 (60.90%), Query Frame = 2 
Query:   74 AAGNTSTLDYRVRL-DIVTAVPTFDFCMQTVEYQNINCPVGDVGGKELIRPLGTH*ILFTHWLIFVVVNVDRDRVGESLHERHRMLHDDELRDAGLLVFAD*QS-SSRCRAAPLRPLISLVLPLFFNATGTYFSCCATSGEGHY*VLEWVSQCTTN 535
            AAG T+ L Y+++L +IVT +PT  F ++TVEY+NI+  V DVGG++ IRPL  H    T  LIFVV + DR+RV E+  E  RML +DELRDA LLVFA+ Q   +   AA +     L L    +      + CATSG+G Y  L+W+S    N
Sbjct:   27 AAGKTTIL-YKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITD--KLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRN 179
[Close]
BLAST of DY271152 vs. ExPASy Swiss-Prot
Match: ARF1_MOUSE (ADP-ribosylation factor 1 OS=Mus musculus GN=Arf1 PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 1.109e-21
Identity = 71/156 (45.51%), Postives = 95/156 (60.90%), Query Frame = 2 
Query:   74 AAGNTSTLDYRVRL-DIVTAVPTFDFCMQTVEYQNINCPVGDVGGKELIRPLGTH*ILFTHWLIFVVVNVDRDRVGESLHERHRMLHDDELRDAGLLVFAD*QS-SSRCRAAPLRPLISLVLPLFFNATGTYFSCCATSGEGHY*VLEWVSQCTTN 535
            AAG T+ L Y+++L +IVT +PT  F ++TVEY+NI+  V DVGG++ IRPL  H    T  LIFVV + DR+RV E+  E  RML +DELRDA LLVFA+ Q   +   AA +     L L    +      + CATSG+G Y  L+W+S    N
Sbjct:   27 AAGKTTIL-YKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITD--KLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRN 179
[Close]
BLAST of DY271152 vs. ExPASy Swiss-Prot
Match: ARF1_MACFA (ADP-ribosylation factor 1 OS=Macaca fascicularis GN=ARF1 PE=2 SV=3)

HSP 1 Score: 104.375 bits (259), Expect = 1.109e-21
Identity = 71/156 (45.51%), Postives = 95/156 (60.90%), Query Frame = 2 
Query:   74 AAGNTSTLDYRVRL-DIVTAVPTFDFCMQTVEYQNINCPVGDVGGKELIRPLGTH*ILFTHWLIFVVVNVDRDRVGESLHERHRMLHDDELRDAGLLVFAD*QS-SSRCRAAPLRPLISLVLPLFFNATGTYFSCCATSGEGHY*VLEWVSQCTTN 535
            AAG T+ L Y+++L +IVT +PT  F ++TVEY+NI+  V DVGG++ IRPL  H    T  LIFVV + DR+RV E+  E  RML +DELRDA LLVFA+ Q   +   AA +     L L    +      + CATSG+G Y  L+W+S    N
Sbjct:   27 AAGKTTIL-YKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITD--KLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRN 179
[Close]
BLAST of DY271152 vs. ExPASy Swiss-Prot
Match: ARF1_HUMAN (ADP-ribosylation factor 1 OS=Homo sapiens GN=ARF1 PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 1.109e-21
Identity = 71/156 (45.51%), Postives = 95/156 (60.90%), Query Frame = 2 
Query:   74 AAGNTSTLDYRVRL-DIVTAVPTFDFCMQTVEYQNINCPVGDVGGKELIRPLGTH*ILFTHWLIFVVVNVDRDRVGESLHERHRMLHDDELRDAGLLVFAD*QS-SSRCRAAPLRPLISLVLPLFFNATGTYFSCCATSGEGHY*VLEWVSQCTTN 535
            AAG T+ L Y+++L +IVT +PT  F ++TVEY+NI+  V DVGG++ IRPL  H    T  LIFVV + DR+RV E+  E  RML +DELRDA LLVFA+ Q   +   AA +     L L    +      + CATSG+G Y  L+W+S    N
Sbjct:   27 AAGKTTIL-YKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITD--KLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRN 179
[Close]
BLAST of DY271152 vs. ExPASy Swiss-Prot
Match: ARF1_BOVIN (ADP-ribosylation factor 1 OS=Bos taurus GN=ARF1 PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 1.109e-21
Identity = 71/156 (45.51%), Postives = 95/156 (60.90%), Query Frame = 2 
Query:   74 AAGNTSTLDYRVRL-DIVTAVPTFDFCMQTVEYQNINCPVGDVGGKELIRPLGTH*ILFTHWLIFVVVNVDRDRVGESLHERHRMLHDDELRDAGLLVFAD*QS-SSRCRAAPLRPLISLVLPLFFNATGTYFSCCATSGEGHY*VLEWVSQCTTN 535
            AAG T+ L Y+++L +IVT +PT  F ++TVEY+NI+  V DVGG++ IRPL  H    T  LIFVV + DR+RV E+  E  RML +DELRDA LLVFA+ Q   +   AA +     L L    +      + CATSG+G Y  L+W+S    N
Sbjct:   27 AAGKTTIL-YKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITD--KLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRN 179
[Close]
BLAST of DY271152 vs. ExPASy Swiss-Prot
Match: ARF3_TAKRU (ADP-ribosylation factor 3 OS=Takifugu rubripes GN=arf3 PE=3 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 2.470e-21
Identity = 70/156 (44.87%), Postives = 95/156 (60.90%), Query Frame = 2 
Query:   74 AAGNTSTLDYRVRL-DIVTAVPTFDFCMQTVEYQNINCPVGDVGGKELIRPLGTH*ILFTHWLIFVVVNVDRDRVGESLHERHRMLHDDELRDAGLLVFAD*QS-SSRCRAAPLRPLISLVLPLFFNATGTYFSCCATSGEGHY*VLEWVSQCTTN 535
            AAG T+ L Y+++L +IVT +PT  F ++TVEY+NI+  V DVGG++ IRPL  H    T  LIFVV + DR+RV E+  E  RML +DELRDA LLVFA+ Q   +   AA +     L L    +      + CATSG+G Y  L+W++    N
Sbjct:   27 AAGKTTIL-YKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITD--KLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKN 179
The following BLAST results are available for this feature:
BLAST of DY271152 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
ARF5_RAT1.109e-2147.02ADP-ribosylation factor 5 OS=Rattus norvegicus GN=... [more]
ARF5_MOUSE1.109e-2147.02ADP-ribosylation factor 5 OS=Mus musculus GN=Arf5 ... [more]
ARF5_HUMAN1.109e-2147.02ADP-ribosylation factor 5 OS=Homo sapiens GN=ARF5 ... [more]
ARF1_XENLA1.109e-2145.51ADP-ribosylation factor 1 OS=Xenopus laevis GN=arf... [more]
ARF1_RAT1.109e-2145.51ADP-ribosylation factor 1 OS=Rattus norvegicus GN=... [more]
ARF1_MOUSE1.109e-2145.51ADP-ribosylation factor 1 OS=Mus musculus GN=Arf1 ... [more]
ARF1_MACFA1.109e-2145.51ADP-ribosylation factor 1 OS=Macaca fascicularis G... [more]
ARF1_HUMAN1.109e-2145.51ADP-ribosylation factor 1 OS=Homo sapiens GN=ARF1 ... [more]
ARF1_BOVIN1.109e-2145.51ADP-ribosylation factor 1 OS=Bos taurus GN=ARF1 PE... [more]
ARF3_TAKRU2.470e-2144.87ADP-ribosylation factor 3 OS=Takifugu rubripes GN=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YA06FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271152 ID=DY271152; Name=DY271152; organism=Citrus clementina; type=EST; length=1005bp
CTGTCATTTTCTAGTCTTTGTAGCCTGCTTTTTGCGCAGAAACAGATGCA
ACTTGTGATGGTGTGTCTCTCACGCTGCAGGTAATACCTCCACTTTGGAC
TATCGCGTGCGGCTGGACATTGTGACTGCCGTTCCGACCTTTGATTTCTG
CATGCAGACTGTGGAATATCAGAACATTAACTGCCCTGTTGGGGATGTGG
GGGGTAAGGAGCTGATTCGACCCTTGGGCACACATTAGATCCTGTTCACT
CACTGGCTGATCTTTGTGGTAGTAAACGTTGATCGTGACCGTGTGGGTGA
ATCATTGCATGAACGGCACCGGATGCTGCATGATGATGAGTTGAGGGATG
CTGGGCTGCTTGTTTTTGCCGACTGACAATCATCTTCCAGATGCCGTGCT
GCGCCGCTTAGACCACTGATAAGCTTGGTCCTCCCTCTCTTCTTCAACGC
CACTGGTACATACTTTAGCTGCTGTGCTACATCTGGGGAAGGACACTATT
AGGTGCTGGAATGGGTCTCGCAATGCACCACTAACTGAGATTAATTGAGT
GCGTAAGTCTGGGCGACCCTTTATCCGCATCGGTTATGTTGAAGGCGTGA
ATGAGTCTTTGTTTTTTTAGTAGGAAATACATTTTGCCCCTTATTCCTAA
CCTCCATAGAACTGATATAATTCCGTTTTTAACTCGTTTTGGCCCACAAC
CAGACATATTCCGCCAAATAAACTGTTATTTGACTACCCCCTATACCCCC
TATTTCATACCTCTTTTGACGTTGTCTCTCCTTTTCTCTACACACACAGA
AAACTACCTTACCGTTCAACCCTCCCCACCCTCCAACCTCATCTCACCCT
CTATACACACCTTACTCCACCACCACTCGCACCGGGGCTTTACGCGCCTC
CTAATCCCCCCCTCCTGCCCTCCCCTCTGCTTACACCCACCACAACTCGC
ACAAAACCCCTCCGCGCCTCCAATCCGCCCCACCTCCCCCCCTCTACCCC
CCCCC
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