DY271152

Overview
NameDY271152
Unique NameDY271152
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1005
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY271152 vs. ExPASy Swiss-Prot
Match: ARF3_RAT (ADP-ribosylation factor 3 OS=Rattus norvegicus GN=Arf3 PE=2 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 2.470e-21
Identity = 70/156 (44.87%), Postives = 95/156 (60.90%), Query Frame = 2 
Query:   74 AAGNTSTLDYRVRL-DIVTAVPTFDFCMQTVEYQNINCPVGDVGGKELIRPLGTH*ILFTHWLIFVVVNVDRDRVGESLHERHRMLHDDELRDAGLLVFAD*QS-SSRCRAAPLRPLISLVLPLFFNATGTYFSCCATSGEGHY*VLEWVSQCTTN 535
            AAG T+ L Y+++L +IVT +PT  F ++TVEY+NI+  V DVGG++ IRPL  H    T  LIFVV + DR+RV E+  E  RML +DELRDA LLVFA+ Q   +   AA +     L L    +      + CATSG+G Y  L+W++    N
Sbjct:   27 AAGKTTIL-YKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITD--KLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKN 179
[Close]
BLAST of DY271152 vs. ExPASy Swiss-Prot
Match: ARF3_PONAB (ADP-ribosylation factor 3 OS=Pongo abelii GN=ARF3 PE=2 SV=3)

HSP 1 Score: 103.219 bits (256), Expect = 2.470e-21
Identity = 70/156 (44.87%), Postives = 95/156 (60.90%), Query Frame = 2 
Query:   74 AAGNTSTLDYRVRL-DIVTAVPTFDFCMQTVEYQNINCPVGDVGGKELIRPLGTH*ILFTHWLIFVVVNVDRDRVGESLHERHRMLHDDELRDAGLLVFAD*QS-SSRCRAAPLRPLISLVLPLFFNATGTYFSCCATSGEGHY*VLEWVSQCTTN 535
            AAG T+ L Y+++L +IVT +PT  F ++TVEY+NI+  V DVGG++ IRPL  H    T  LIFVV + DR+RV E+  E  RML +DELRDA LLVFA+ Q   +   AA +     L L    +      + CATSG+G Y  L+W++    N
Sbjct:   27 AAGKTTIL-YKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITD--KLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKN 179
[Close]
BLAST of DY271152 vs. ExPASy Swiss-Prot
Match: ARF3_MOUSE (ADP-ribosylation factor 3 OS=Mus musculus GN=Arf3 PE=2 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 2.470e-21
Identity = 70/156 (44.87%), Postives = 95/156 (60.90%), Query Frame = 2 
Query:   74 AAGNTSTLDYRVRL-DIVTAVPTFDFCMQTVEYQNINCPVGDVGGKELIRPLGTH*ILFTHWLIFVVVNVDRDRVGESLHERHRMLHDDELRDAGLLVFAD*QS-SSRCRAAPLRPLISLVLPLFFNATGTYFSCCATSGEGHY*VLEWVSQCTTN 535
            AAG T+ L Y+++L +IVT +PT  F ++TVEY+NI+  V DVGG++ IRPL  H    T  LIFVV + DR+RV E+  E  RML +DELRDA LLVFA+ Q   +   AA +     L L    +      + CATSG+G Y  L+W++    N
Sbjct:   27 AAGKTTIL-YKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITD--KLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKN 179
[Close]
BLAST of DY271152 vs. ExPASy Swiss-Prot
Match: ARF3_HUMAN (ADP-ribosylation factor 3 OS=Homo sapiens GN=ARF3 PE=1 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 2.470e-21
Identity = 70/156 (44.87%), Postives = 95/156 (60.90%), Query Frame = 2 
Query:   74 AAGNTSTLDYRVRL-DIVTAVPTFDFCMQTVEYQNINCPVGDVGGKELIRPLGTH*ILFTHWLIFVVVNVDRDRVGESLHERHRMLHDDELRDAGLLVFAD*QS-SSRCRAAPLRPLISLVLPLFFNATGTYFSCCATSGEGHY*VLEWVSQCTTN 535
            AAG T+ L Y+++L +IVT +PT  F ++TVEY+NI+  V DVGG++ IRPL  H    T  LIFVV + DR+RV E+  E  RML +DELRDA LLVFA+ Q   +   AA +     L L    +      + CATSG+G Y  L+W++    N
Sbjct:   27 AAGKTTIL-YKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITD--KLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKN 179
[Close]
BLAST of DY271152 vs. ExPASy Swiss-Prot
Match: ARF3_BOVIN (ADP-ribosylation factor 3 OS=Bos taurus GN=ARF3 PE=2 SV=3)

HSP 1 Score: 103.219 bits (256), Expect = 2.470e-21
Identity = 70/156 (44.87%), Postives = 95/156 (60.90%), Query Frame = 2 
Query:   74 AAGNTSTLDYRVRL-DIVTAVPTFDFCMQTVEYQNINCPVGDVGGKELIRPLGTH*ILFTHWLIFVVVNVDRDRVGESLHERHRMLHDDELRDAGLLVFAD*QS-SSRCRAAPLRPLISLVLPLFFNATGTYFSCCATSGEGHY*VLEWVSQCTTN 535
            AAG T+ L Y+++L +IVT +PT  F ++TVEY+NI+  V DVGG++ IRPL  H    T  LIFVV + DR+RV E+  E  RML +DELRDA LLVFA+ Q   +   AA +     L L    +      + CATSG+G Y  L+W++    N
Sbjct:   27 AAGKTTIL-YKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITD--KLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKN 179
[Close]
BLAST of DY271152 vs. ExPASy Swiss-Prot
Match: ARF1_DICDI (ADP-ribosylation factor 1 OS=Dictyostelium discoideum GN=arfA PE=1 SV=3)

HSP 1 Score: 103.219 bits (256), Expect = 2.470e-21
Identity = 67/155 (43.23%), Postives = 93/155 (60.00%), Query Frame = 2 
Query:   74 AAGNTSTLDYRVRL-DIVTAVPTFDFCMQTVEYQNINCPVGDVGGKELIRPLGTH*ILFTHWLIFVVVNVDRDRVGESLHERHRMLHDDELRDAGLLVFAD*QSSSRCRAAPLRPLISLVLPLFFNATGTYFSCCATSGEGHY*VLEWVSQCTTN 535
            AAG T+ L Y+++L +IVT +PT  F ++TVE++NIN  V DVGG++ IRPL  H    T  LIFVV + DR+R+ E+  E  +ML++DELRDA LLVF + Q      +        L L    +      S CATSG+G Y  L+W+S   T+
Sbjct:   27 AAGKTTIL-YKLKLGEIVTTIPTIGFNVETVEFKNINFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIQEACDELTKMLNEDELRDAVLLVFCNKQDLPNAMSV-AEVTDKLNLHSLRSRKWYIQSTCATSGDGLYEGLDWLSNTLTS 179
[Close]
BLAST of DY271152 vs. ExPASy Swiss-Prot
Match: ARF5_CHICK (ADP-ribosylation factor 5 OS=Gallus gallus GN=ARF5 PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 4.213e-21
Identity = 68/150 (45.33%), Postives = 88/150 (58.67%), Query Frame = 2 
Query:   74 AAGNTSTLDYRVRL-DIVTAVPTFDFCMQTVEYQNINCPVGDVGGKELIRPLGTH*ILFTHWLIFVVVNVDRDRVGESLHERHRMLHDDELRDAGLLVFAD*QSSSRCRAAPLRPLISLVLPLFFNATGTYFSCCATSGEGHY*VLEWVS 520
            AAG T+ L Y+++L +IVT +PT  F ++TVEY+NI   V DVGG++ IRPL  H    T  LIFVV + DR+RV ES  E  +ML +DELRDA LLVFA+ Q               L L    + T    + CAT G G Y  L+W+S
Sbjct:   27 AAGKTTIL-YKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESAEELQKMLQEDELRDAVLLVFANKQDMPNAMVVS-ELTDKLGLQALRSRTWYVQATCATQGTGLYDGLDWLS 174
[Close]
BLAST of DY271152 vs. ExPASy Swiss-Prot
Match: ARF2_RAT (ADP-ribosylation factor 2 OS=Rattus norvegicus GN=Arf2 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 4.213e-21
Identity = 70/156 (44.87%), Postives = 93/156 (59.62%), Query Frame = 2 
Query:   74 AAGNTSTLDYRVRL-DIVTAVPTFDFCMQTVEYQNINCPVGDVGGKELIRPLGTH*ILFTHWLIFVVVNVDRDRVGESLHERHRMLHDDELRDAGLLVFAD*QS-SSRCRAAPLRPLISLVLPLFFNATGTYFSCCATSGEGHY*VLEWVSQCTTN 535
            AAG T+ L Y+++L +IVT +PT  F ++TVEY+NI+  V DVGG++ IRPL  H    T  LIFVV + DR+RV E+  E  RML +DELRDA LLVF + Q   +   AA +     L L           + CATSG+G Y  L+W+S    N
Sbjct:   27 AAGKTTIL-YKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAVLLVFVNKQDLPNAMNAAEITD--KLGLHSLRQRNWYIQATCATSGDGLYEGLDWLSNQLKN 179
[Close]
BLAST of DY271152 vs. ExPASy Swiss-Prot
Match: ARF2_MOUSE (ADP-ribosylation factor 2 OS=Mus musculus GN=Arf2 PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 4.213e-21
Identity = 70/156 (44.87%), Postives = 93/156 (59.62%), Query Frame = 2 
Query:   74 AAGNTSTLDYRVRL-DIVTAVPTFDFCMQTVEYQNINCPVGDVGGKELIRPLGTH*ILFTHWLIFVVVNVDRDRVGESLHERHRMLHDDELRDAGLLVFAD*QS-SSRCRAAPLRPLISLVLPLFFNATGTYFSCCATSGEGHY*VLEWVSQCTTN 535
            AAG T+ L Y+++L +IVT +PT  F ++TVEY+NI+  V DVGG++ IRPL  H    T  LIFVV + DR+RV E+  E  RML +DELRDA LLVF + Q   +   AA +     L L           + CATSG+G Y  L+W+S    N
Sbjct:   27 AAGKTTIL-YKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAVLLVFVNKQDLPNAMNAAEITD--KLGLHSLRQRNWYIQATCATSGDGLYEGLDWLSNQLKN 179
[Close]
BLAST of DY271152 vs. ExPASy Swiss-Prot
Match: ARF2_DROME (ADP-ribosylation factor 2 OS=Drosophila melanogaster GN=Arf102F PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 4.213e-21
Identity = 71/151 (47.02%), Postives = 90/151 (59.60%), Query Frame = 2 
Query:   74 AAGNTSTLDYRVRL-DIVTAVPTFDFCMQTVEYQNINCPVGDVGGKELIRPLGTH*ILFTHWLIFVVVNVDRDRVGESLHERHRMLHDDELRDAGLLVFAD*QS-SSRCRAAPLRPLISLVLPLFFNATGTYFSCCATSGEGHY*VLEWVS 520
            AAG T+ L Y+++L +IVT +PT  F ++TVEY+NI   V DVGG++ IRPL  H    T  LIFVV + DRDR+ E+  E   ML +DELRDA LLVFA+ Q   +   AA L     L L    N      S CAT G G Y  L+W+S
Sbjct:   27 AAGKTTIL-YKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRITEAERELQNMLQEDELRDAVLLVFANKQDLPNAMTAAELTD--KLRLNQLRNRHWFIQSTCATQGHGLYEGLDWLS 174
The following BLAST results are available for this feature:
BLAST of DY271152 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
ARF3_RAT2.470e-2144.87ADP-ribosylation factor 3 OS=Rattus norvegicus GN=... [more]
ARF3_PONAB2.470e-2144.87ADP-ribosylation factor 3 OS=Pongo abelii GN=ARF3 ... [more]
ARF3_MOUSE2.470e-2144.87ADP-ribosylation factor 3 OS=Mus musculus GN=Arf3 ... [more]
ARF3_HUMAN2.470e-2144.87ADP-ribosylation factor 3 OS=Homo sapiens GN=ARF3 ... [more]
ARF3_BOVIN2.470e-2144.87ADP-ribosylation factor 3 OS=Bos taurus GN=ARF3 PE... [more]
ARF1_DICDI2.470e-2143.23ADP-ribosylation factor 1 OS=Dictyostelium discoid... [more]
ARF5_CHICK4.213e-2145.33ADP-ribosylation factor 5 OS=Gallus gallus GN=ARF5... [more]
ARF2_RAT4.213e-2144.87ADP-ribosylation factor 2 OS=Rattus norvegicus GN=... [more]
ARF2_MOUSE4.213e-2144.87ADP-ribosylation factor 2 OS=Mus musculus GN=Arf2 ... [more]
ARF2_DROME4.213e-2147.02ADP-ribosylation factor 2 OS=Drosophila melanogast... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YA06FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271152 ID=DY271152; Name=DY271152; organism=Citrus clementina; type=EST; length=1005bp
CTGTCATTTTCTAGTCTTTGTAGCCTGCTTTTTGCGCAGAAACAGATGCA
ACTTGTGATGGTGTGTCTCTCACGCTGCAGGTAATACCTCCACTTTGGAC
TATCGCGTGCGGCTGGACATTGTGACTGCCGTTCCGACCTTTGATTTCTG
CATGCAGACTGTGGAATATCAGAACATTAACTGCCCTGTTGGGGATGTGG
GGGGTAAGGAGCTGATTCGACCCTTGGGCACACATTAGATCCTGTTCACT
CACTGGCTGATCTTTGTGGTAGTAAACGTTGATCGTGACCGTGTGGGTGA
ATCATTGCATGAACGGCACCGGATGCTGCATGATGATGAGTTGAGGGATG
CTGGGCTGCTTGTTTTTGCCGACTGACAATCATCTTCCAGATGCCGTGCT
GCGCCGCTTAGACCACTGATAAGCTTGGTCCTCCCTCTCTTCTTCAACGC
CACTGGTACATACTTTAGCTGCTGTGCTACATCTGGGGAAGGACACTATT
AGGTGCTGGAATGGGTCTCGCAATGCACCACTAACTGAGATTAATTGAGT
GCGTAAGTCTGGGCGACCCTTTATCCGCATCGGTTATGTTGAAGGCGTGA
ATGAGTCTTTGTTTTTTTAGTAGGAAATACATTTTGCCCCTTATTCCTAA
CCTCCATAGAACTGATATAATTCCGTTTTTAACTCGTTTTGGCCCACAAC
CAGACATATTCCGCCAAATAAACTGTTATTTGACTACCCCCTATACCCCC
TATTTCATACCTCTTTTGACGTTGTCTCTCCTTTTCTCTACACACACAGA
AAACTACCTTACCGTTCAACCCTCCCCACCCTCCAACCTCATCTCACCCT
CTATACACACCTTACTCCACCACCACTCGCACCGGGGCTTTACGCGCCTC
CTAATCCCCCCCTCCTGCCCTCCCCTCTGCTTACACCCACCACAACTCGC
ACAAAACCCCTCCGCGCCTCCAATCCGCCCCACCTCCCCCCCTCTACCCC
CCCCC
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