DY271152
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271152 vs. ExPASy Swiss-Prot
Match: ARF4_RAT (ADP-ribosylation factor 4 OS=Rattus norvegicus GN=Arf4 PE=2 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 3.943e-19 Identity = 65/150 (43.33%), Postives = 87/150 (58.00%), Query Frame = 2 Query: 74 AAGNTSTLDYRVRL-DIVTAVPTFDFCMQTVEYQNINCPVGDVGGKELIRPLGTH*ILFTHWLIFVVVNVDRDRVGESLHERHRMLHDDELRDAGLLVFAD*QSSSRCRAAPLRPLISLVLPLFFNATGTYFSCCATSGEGHY*VLEWVS 520 AAG T+ L Y+++L +IVT +PT F ++TVEY+NI V DVGG++ IRPL H T LIFVV + DR+R+ E +ML +DEL+DA LL+FA+ Q A L L N T + CAT G G Y L+W+S Sbjct: 27 AAGKTTIL-YKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIQEGAAVLQKMLLEDELQDAVLLLFANKQDLPNAMAIS-EMTDKLGLQSLRNRTWYVQATCATQGTGLYEGLDWLS 174
BLAST of DY271152 vs. ExPASy Swiss-Prot
Match: ARF4_MOUSE (ADP-ribosylation factor 4 OS=Mus musculus GN=Arf4 PE=2 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 3.943e-19 Identity = 65/150 (43.33%), Postives = 87/150 (58.00%), Query Frame = 2 Query: 74 AAGNTSTLDYRVRL-DIVTAVPTFDFCMQTVEYQNINCPVGDVGGKELIRPLGTH*ILFTHWLIFVVVNVDRDRVGESLHERHRMLHDDELRDAGLLVFAD*QSSSRCRAAPLRPLISLVLPLFFNATGTYFSCCATSGEGHY*VLEWVS 520 AAG T+ L Y+++L +IVT +PT F ++TVEY+NI V DVGG++ IRPL H T LIFVV + DR+R+ E +ML +DEL+DA LL+FA+ Q A L L N T + CAT G G Y L+W+S Sbjct: 27 AAGKTTIL-YKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIQEGAAVLQKMLLEDELQDAVLLLFANKQDLPNAMAIS-EMTDKLGLQSLRNRTWYVQATCATQGTGLYEGLDWLS 174
BLAST of DY271152 vs. ExPASy Swiss-Prot
Match: ARF1_PLAFO (ADP-ribosylation factor 1 OS=Plasmodium falciparum (isolate NF54) GN=ARF1 PE=2 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 3.943e-19 Identity = 61/155 (39.35%), Postives = 91/155 (58.71%), Query Frame = 2 Query: 74 AAGNTSTLDYRVRL-DIVTAVPTFDFCMQTVEYQNINCPVGDVGGKELIRPLGTH*ILFTHWLIFVVVNVDRDRVGESLHERHRMLHDDELRDAGLLVFAD*QSSSRCRAAPLRPLISLVLPLFFNATGTYFSCCATSGEGHY*VLEWVSQCTTN 535 AAG T+ L Y+V+L ++VT +PT F ++TVE++NI+ V DVGG++ IRPL H T LIFVV + DR+R+ ++ HRM++++EL+DA +LVFA+ Q +A L L S CAT G+G Y +W++ N Sbjct: 27 AAGKTTIL-YKVKLGEVVTTIPTIGFNVETVEFRNISFTVWDVGGQDKIRPLWRHYYSNTDGLIFVVDSNDRERIDDAREGLHRMINEEELKDAIILVFANKQDLPNAMSA-AEVTEKLHLNTIRERNWFIQSTCATRGDGLYEGFDWLTTHLNN 179
BLAST of DY271152 vs. ExPASy Swiss-Prot
Match: ARF6_RAT (ADP-ribosylation factor 6 OS=Rattus norvegicus GN=Arf6 PE=1 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 4.359e-18 Identity = 61/150 (40.67%), Postives = 85/150 (56.67%), Query Frame = 2 Query: 74 AAGNTSTLDYRVRL-DIVTAVPTFDFCMQTVEYQNINCPVGDVGGKELIRPLGTH*ILFTHWLIFVVVNVDRDRVGESLHERHRMLHDDELRDAGLLVFAD*QSSSRCRAAPLRPLISLVLPLFFNATGTYFSCCATSGEGHY*VLEWVS 520 AAG T+ L Y+++L VT +PT F ++TV Y+N+ V DVGG++ IRPL H T LIFVV DRDR+ E+ E HR+++D E+RDA +L+FA+ Q P L L + CATSG+G Y L W++ Sbjct: 23 AAGKTTIL-YKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDA-MKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLT 170
BLAST of DY271152 vs. ExPASy Swiss-Prot
Match: ARF6_PIG (ADP-ribosylation factor 6 OS=Sus scrofa GN=ARF6 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 4.359e-18 Identity = 61/150 (40.67%), Postives = 85/150 (56.67%), Query Frame = 2 Query: 74 AAGNTSTLDYRVRL-DIVTAVPTFDFCMQTVEYQNINCPVGDVGGKELIRPLGTH*ILFTHWLIFVVVNVDRDRVGESLHERHRMLHDDELRDAGLLVFAD*QSSSRCRAAPLRPLISLVLPLFFNATGTYFSCCATSGEGHY*VLEWVS 520 AAG T+ L Y+++L VT +PT F ++TV Y+N+ V DVGG++ IRPL H T LIFVV DRDR+ E+ E HR+++D E+RDA +L+FA+ Q P L L + CATSG+G Y L W++ Sbjct: 23 AAGKTTIL-YKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDA-MKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLT 170
BLAST of DY271152 vs. ExPASy Swiss-Prot
Match: ARF6_MOUSE (ADP-ribosylation factor 6 OS=Mus musculus GN=Arf6 PE=1 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 4.359e-18 Identity = 61/150 (40.67%), Postives = 85/150 (56.67%), Query Frame = 2 Query: 74 AAGNTSTLDYRVRL-DIVTAVPTFDFCMQTVEYQNINCPVGDVGGKELIRPLGTH*ILFTHWLIFVVVNVDRDRVGESLHERHRMLHDDELRDAGLLVFAD*QSSSRCRAAPLRPLISLVLPLFFNATGTYFSCCATSGEGHY*VLEWVS 520 AAG T+ L Y+++L VT +PT F ++TV Y+N+ V DVGG++ IRPL H T LIFVV DRDR+ E+ E HR+++D E+RDA +L+FA+ Q P L L + CATSG+G Y L W++ Sbjct: 23 AAGKTTIL-YKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDA-MKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLT 170
BLAST of DY271152 vs. ExPASy Swiss-Prot
Match: ARF6_HUMAN (ADP-ribosylation factor 6 OS=Homo sapiens GN=ARF6 PE=1 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 4.359e-18 Identity = 61/150 (40.67%), Postives = 85/150 (56.67%), Query Frame = 2 Query: 74 AAGNTSTLDYRVRL-DIVTAVPTFDFCMQTVEYQNINCPVGDVGGKELIRPLGTH*ILFTHWLIFVVVNVDRDRVGESLHERHRMLHDDELRDAGLLVFAD*QSSSRCRAAPLRPLISLVLPLFFNATGTYFSCCATSGEGHY*VLEWVS 520 AAG T+ L Y+++L VT +PT F ++TV Y+N+ V DVGG++ IRPL H T LIFVV DRDR+ E+ E HR+++D E+RDA +L+FA+ Q P L L + CATSG+G Y L W++ Sbjct: 23 AAGKTTIL-YKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDA-MKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLT 170
BLAST of DY271152 vs. ExPASy Swiss-Prot
Match: ARF6_CHICK (ADP-ribosylation factor 6 OS=Gallus gallus GN=ARF6 PE=2 SV=3) HSP 1 Score: 91.2781 bits (225), Expect = 9.712e-18 Identity = 60/150 (40.00%), Postives = 85/150 (56.67%), Query Frame = 2 Query: 74 AAGNTSTLDYRVRL-DIVTAVPTFDFCMQTVEYQNINCPVGDVGGKELIRPLGTH*ILFTHWLIFVVVNVDRDRVGESLHERHRMLHDDELRDAGLLVFAD*QSSSRCRAAPLRPLISLVLPLFFNATGTYFSCCATSGEGHY*VLEWVS 520 AAG T+ L Y+++L VT +PT F ++TV Y+N+ V DVGG++ IRPL H T LIFVV DRDR+ E+ E HR+++D E+RDA +L+FA+ Q P L L + CAT+G+G Y L W++ Sbjct: 23 AAGKTTIL-YKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDA-MKPHEIQEKLGLTRIRDRNWYVQPSCATTGDGLYEGLTWLT 170
BLAST of DY271152 vs. ExPASy Swiss-Prot
Match: ARF_GIALA (ADP-ribosylation factor OS=Giardia lamblia PE=3 SV=3) HSP 1 Score: 90.5077 bits (223), Expect = 1.657e-17 Identity = 63/153 (41.18%), Postives = 89/153 (58.17%), Query Frame = 2 Query: 74 AAGNTSTLDYRVRL-DIVTAVPTFDFCMQTVEYQNINCPVGDVGGKELIRPLGTH*ILFTHWLIFVVVNVDRD--RVGESLHERHRMLHDDELRDAGLLVFAD*QSSSRCRAAPLRPLISLVLPLFFNATGTYFS-CCATSGEGHY*VLEWVS 520 AAG T+ L Y++ L ++VT VPT F ++TVEY+NIN V DVGG++ IRPL H T LI+V+ + D + R+ ++ +E H +L +DELRDA LLVFA+ Q +A L + Y CA SG+G Y L+W+S Sbjct: 27 AAGKTTIL-YKLMLGEVVTTVPTIGFNVETVEYKNINFTVWDVGGQDSIRPLWRHYYQNTDALIYVIDSADLEPKRIEDAKNELHTLLGEDELRDAALLVFANKQDLP--KAMSTTDLTERLGLQELKKRDWYIQPTCARSGDGLYQGLDWLS 176
BLAST of DY271152 vs. ExPASy Swiss-Prot
Match: ARF6_XENLA (ADP-ribosylation factor 6 OS=Xenopus laevis GN=arf6 PE=2 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 2.826e-17 Identity = 60/150 (40.00%), Postives = 84/150 (56.00%), Query Frame = 2 Query: 74 AAGNTSTLDYRVRL-DIVTAVPTFDFCMQTVEYQNINCPVGDVGGKELIRPLGTH*ILFTHWLIFVVVNVDRDRVGESLHERHRMLHDDELRDAGLLVFAD*QSSSRCRAAPLRPLISLVLPLFFNATGTYFSCCATSGEGHY*VLEWVS 520 AAG T+ L Y+++L VT +PT F ++TV Y+N+ V DVGG++ IRPL H T LIFVV DRDR+ E+ E HR+++D E+RDA +L+FA+ Q P L L + CA SG+G Y L W++ Sbjct: 23 AAGKTTIL-YKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCPDRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDA-MKPHEIQEKLGLTRIRDRNWYVQPSCAASGDGLYEGLTWLT 170 The following BLAST results are available for this feature:
BLAST of DY271152 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 79
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271152 ID=DY271152; Name=DY271152; organism=Citrus clementina; type=EST; length=1005bpback to top |