DY271153
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY271153 vs. ExPASy Swiss-Prot
Match: RL21_CAPHI (60S ribosomal protein L21 OS=Capra hircus GN=RPL21 PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.370e-38 Identity = 76/152 (50.00%), Postives = 105/152 (69.08%), Query Frame = 3 Query: 60 GLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAKARGEVISTKRQPKGPKPGFMV--EGATLETVTPIPYD 509 G R TR +F+RPFRK G +PL+TY+R Y+ GD VD+K G V KGMPHK YHG+TGRV+NVT+ A+G+ +NKQV +I+ KRI+VR+EH++ S+ + F R K+ND+ K +AK +G + KRQP P+ V G E + PIPY+ Sbjct: 6 GKRRGTRYMFSRPFRKHGVVPLATYMRIYRKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYE 157
BLAST of DY271153 vs. ExPASy Swiss-Prot
Match: RL21_RAT (60S ribosomal protein L21 OS=Rattus norvegicus GN=Rpl21 PE=1 SV=3) HSP 1 Score: 156.377 bits (394), Expect = 1.514e-37 Identity = 75/152 (49.34%), Postives = 103/152 (67.76%), Query Frame = 3 Query: 60 GLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAKARGEVISTKRQPKGPKPGFMV--EGATLETVTPIPYD 509 G R TR +F+RPFRK G +PL+TY+R YK GD VD+K G V KGMPHK YHG+TGRV+NVT+ A+G+ +NKQV +I+ KRI+VR+EH++ S+ + F R K+ND+ K +AK +G + QP P+ V G E + PIPY+ Sbjct: 6 GKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLNGQPAPPREAHFVRTNGKEPELLEPIPYE 157
BLAST of DY271153 vs. ExPASy Swiss-Prot
Match: RL21_MOUSE (60S ribosomal protein L21 OS=Mus musculus GN=Rpl21 PE=2 SV=3) HSP 1 Score: 155.992 bits (393), Expect = 1.978e-37 Identity = 75/152 (49.34%), Postives = 103/152 (67.76%), Query Frame = 3 Query: 60 GLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAKARGEVISTKRQPKGPKPGFMV--EGATLETVTPIPYD 509 G R TR +F+RPFRK G +PL+TY+R YK GD VD+K G V KGMPHK YHG+TGRV+NVT+ A+G+ +NKQV +I+ KRI+VR+EH++ S+ + F R K+ND+ K +AK +G + KR P+ V G E + PIPY+ Sbjct: 6 GKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRHAAPPREAHFVRTNGKEPELLEPIPYE 157
BLAST of DY271153 vs. ExPASy Swiss-Prot
Match: RL21_ENTHI (60S ribosomal protein L21 OS=Entamoeba histolytica GN=RPL21 PE=2 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 2.673e-34 Identity = 73/164 (44.51%), Postives = 104/164 (63.41%), Query Frame = 3 Query: 45 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRK-------KKNDELKADAKARGEVISTKRQPKGPKPGFMVEGATLE--TVTPIPYD 509 MP +G RTR LF RPFR G ST L TYK+GDYV + N ++ G+P+K +HG+TGRVWNV AIGV +NK+V NRI+ KR+H+ EH++PS C ++F RK K+N +LK + K + KR PK P+P +++GA ++ TV P+ ++ Sbjct: 1 MPLSNGRNRRTRKLFKRPFRGHGLSNTSTILHTYKVGDYVTILCNSSIQHGLPYKAFHGKTGRVWNVNPHAIGVMVNKKVNNRIVVKRLHISPEHIRPSGCQKDFLERKAAVAAIRKQNIQLKKEGKPL-LPLPAKRLPKQPRPAELIKGADIKFTTVAPLKFE 163
BLAST of DY271153 vs. ExPASy Swiss-Prot
Match: RL21_CAEEL (60S ribosomal protein L21 OS=Caenorhabditis elegans GN=rpl-21 PE=1 SV=3) HSP 1 Score: 145.206 bits (365), Expect = 3.491e-34 Identity = 75/160 (46.88%), Postives = 103/160 (64.38%), Query Frame = 3 Query: 45 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAKARGE-VISTKRQPKGPKPGFMV--EGATLETVTPIPYDVV 515 M GLR TR +FAR FRK G LSTY YK GD VD+K NGA KGMP K YHGRTGR++NVT+ A+G+ +NK+V I+ KRI++R+EH++PS+C +F R K NDE + AK+ G+ V + KR P P+ V + E + P+ +++V Sbjct: 1 MTNSKGLRRGTRYMFARDFRKHGVEHLSTYYTQYKRGDLVDIKTNGAFQKGMPFKAYHGRTGRIFNVTRGAVGIIVNKRVRGNILPKRINIRIEHIKPSKCRTDFLNRVKSNDEKRKAAKSAGQPVPALKRLPVAPRGAHTVTTQNNEPELLAPLRFEIV 160
BLAST of DY271153 vs. ExPASy Swiss-Prot
Match: RL21_PYUST (60S ribosomal protein L21 (Fragment) OS=Pyura stolonifera GN=RPL21 PE=2 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 1.123e-32 Identity = 68/147 (46.26%), Postives = 101/147 (68.71%), Query Frame = 3 Query: 72 RTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAKARGEVISTKRQPKGPKPG-FMVEGATLETVTPIPYD 509 R D+F++ FR++G IPL+ YL YK GD VD+K +G+V K PHK YHG+TGR++NVT+ A+G+ +NKQV RII KRI+VR+EH++ S+ F R +N+ + +A+ + ++ KRQP+ P+ G F+ A E V PIPY+ Sbjct: 9 RGSDMFSKKFRERGAIPLNKYLTVYKKGDIVDIKGDGSVQKVCPHKVYHGKTGRIFNVTQHAVGIIVNKQVRGRIIAKRINVRIEHIKHSKSRISFIQRVHENERKRKEAREKKIRVNLKRQPQQPRTGHFVRSSAEPELVEPIPYE 155
BLAST of DY271153 vs. ExPASy Swiss-Prot
Match: RL21_ENCCU (60S ribosomal protein L21 OS=Encephalitozoon cuniculi GN=RPL21 PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.421e-27 Identity = 63/132 (47.73%), Postives = 92/132 (69.70%), Query Frame = 3 Query: 60 GLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAKARGEVIS-TKRQPKGPK 452 G R TR LF++ RK G +S YL Y+IGD VD+ VN A+ KGMPHK+YHGRTGRV++V R++ V + K+V + + K+I VR+EHV+ SRC+EE + R E+ DA++RG V++ +KR+ +GP+ Sbjct: 5 GYRRGTRYLFSQDHRKHGVAHVSKYLEKYEIGDMVDILVNPAMMKGMPHKYYHGRTGRVYDVKPRSLNVALYKRVRGKYVIKKIIVRIEHVRKSRCSEESQKRILMAAEMARDAESRGVVLAPSKRKIEGPR 136
BLAST of DY271153 vs. ExPASy Swiss-Prot
Match: RL21_PIG (60S ribosomal protein L21 (Fragment) OS=Sus scrofa GN=RPL21 PE=3 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.801e-14 Identity = 35/57 (61.40%), Postives = 43/57 (75.44%), Query Frame = 3 Query: 60 GLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTG 230 G R TR +F+RPFRK G +PL+TY+R YK GD VD+K G V KG+PHK YHG+TG Sbjct: 6 GKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGLPHKCYHGKTG 62
BLAST of DY271153 vs. ExPASy Swiss-Prot
Match: RL21_STAMF (50S ribosomal protein L21e OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpl21e PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.992e-13 Identity = 40/99 (40.40%), Postives = 63/99 (63.64%), Query Frame = 3 Query: 51 AGHGLRSRTRDLFARPFRKKGYIP-LSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSR 344 A G R RTR +F++ R+KG +P LS + YK GD V + VN A+HKGMPH+ YHG+TG + + KR + +G++ +K + +R EH++P++ Sbjct: 4 APRGYRHRTRKVFSKHIREKGAVPPLSLLMIDYKPGDKVHIVVNPAIHKGMPHRRYHGKTGTI--IGKRGKAYIVKITLGDK--EKTLFIRPEHLRPAK 98
BLAST of DY271153 vs. ExPASy Swiss-Prot
Match: RL21_SULAC (50S ribosomal protein L21e OS=Sulfolobus acidocaldarius GN=rpl21e PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.795e-13 Identity = 41/94 (43.62%), Postives = 59/94 (62.77%), Query Frame = 3 Query: 60 GLRSRTRDLFARPFRKKGYIP-LSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQP 338 G RS+TR L + R+KG IP LS + Y G+YV VK+N ++HKGMPH+ YHG+ G V V KR E+ +G++ ++ + VR EH+ P Sbjct: 7 GYRSKTRKLLEKKVREKGAIPKLSLLMHDYSQGEYVVVKINPSIHKGMPHRRYHGKVGLV--VGKRGKAYEVKVNIGDK--ERVLIVRPEHLIP 96 The following BLAST results are available for this feature:
BLAST of DY271153 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271153 ID=DY271153; Name=DY271153; organism=Citrus clementina; type=EST; length=742bpback to top |