DY271156
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271156 vs. ExPASy Swiss-Prot
Match: H2A3_CHICK (Histone H2A-III OS=Gallus gallus PE=1 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 2.683e-31 Identity = 69/113 (61.06%), Postives = 78/113 (69.03%), Query Frame = 2 Query: 116 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGK 454 +K+ SRS +AGLQFPVGR+ R L+ G YAERVGAGAP GN ARDNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNI LLPKK K Sbjct: 13 AKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNPARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTDSHK 125
BLAST of DY271156 vs. ExPASy Swiss-Prot
Match: H2A1_HUMAN (Histone H2A type 1 OS=Homo sapiens GN=HIST1H2AG PE=1 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 2.683e-31 Identity = 68/108 (62.96%), Postives = 78/108 (72.22%), Query Frame = 2 Query: 116 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKK 439 +K+ +RS +AGLQFPVGR+ R L+ G YAERVGAGAP GNAARDNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNI LLPKK Sbjct: 13 AKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120
BLAST of DY271156 vs. ExPASy Swiss-Prot
Match: H2A1_BOVIN (Histone H2A type 1 OS=Bos taurus PE=1 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 2.683e-31 Identity = 68/108 (62.96%), Postives = 78/108 (72.22%), Query Frame = 2 Query: 116 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKK 439 +K+ +RS +AGLQFPVGR+ R L+ G YAERVGAGAP GNAARDNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNI LLPKK Sbjct: 13 AKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120
BLAST of DY271156 vs. ExPASy Swiss-Prot
Match: H2A1J_HUMAN (Histone H2A type 1-J OS=Homo sapiens GN=HIST1H2AJ PE=1 SV=3) HSP 1 Score: 135.576 bits (340), Expect = 2.683e-31 Identity = 68/108 (62.96%), Postives = 78/108 (72.22%), Query Frame = 2 Query: 116 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKK 439 +K+ +RS +AGLQFPVGR+ R L+ G YAERVGAGAP GNAARDNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNI LLPKK Sbjct: 13 AKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120
BLAST of DY271156 vs. ExPASy Swiss-Prot
Match: H2A1H_HUMAN (Histone H2A type 1-H OS=Homo sapiens GN=HIST1H2AH PE=1 SV=3) HSP 1 Score: 135.576 bits (340), Expect = 2.683e-31 Identity = 68/108 (62.96%), Postives = 78/108 (72.22%), Query Frame = 2 Query: 116 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKK 439 +K+ +RS +AGLQFPVGR+ R L+ G YAERVGAGAP GNAARDNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNI LLPKK Sbjct: 13 AKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120
BLAST of DY271156 vs. ExPASy Swiss-Prot
Match: H2A_URECA (Histone H2A OS=Urechis caupo PE=3 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 3.504e-31 Identity = 69/107 (64.49%), Postives = 76/107 (71.03%), Query Frame = 2 Query: 119 KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKK 439 KS SRS +AGLQFPVGRI R L+ G YAER+GAGAP GNAARDNKK RI+PRH+QLA+RNDEEL+KLL VTIA GGVLPNI LLPKK Sbjct: 13 KSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKK 119
BLAST of DY271156 vs. ExPASy Swiss-Prot
Match: H2A_PETCR (Histone H2A OS=Petroselinum crispum PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.504e-31 Identity = 69/110 (62.73%), Postives = 78/110 (70.91%), Query Frame = 2 Query: 119 KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGK 448 KSV+RS KAGLQFPVGRI R+LK G+YA+RVG GAP GNAARDNKK RI+PRH+ LAVRNDEEL KLL VT A+GGVLPNI+ LLPKK + Sbjct: 21 KSVTRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHLLLAVRNDEELGKLLAGVTFAHGGVLPNINPVLLPKKTAE 130
BLAST of DY271156 vs. ExPASy Swiss-Prot
Match: H2A3_RAT (Histone H2A type 3 OS=Rattus norvegicus PE=2 SV=3) HSP 1 Score: 135.191 bits (339), Expect = 3.504e-31 Identity = 68/108 (62.96%), Postives = 78/108 (72.22%), Query Frame = 2 Query: 116 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKK 439 +K+ SRS +AGLQFPVGR+ R L+ G Y+ERVGAGAP GNAARDNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNI LLPKK Sbjct: 13 AKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120
BLAST of DY271156 vs. ExPASy Swiss-Prot
Match: H2A3_MOUSE (Histone H2A type 3 OS=Mus musculus GN=Hist3h2a PE=1 SV=3) HSP 1 Score: 135.191 bits (339), Expect = 3.504e-31 Identity = 68/108 (62.96%), Postives = 78/108 (72.22%), Query Frame = 2 Query: 116 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKK 439 +K+ SRS +AGLQFPVGR+ R L+ G Y+ERVGAGAP GNAARDNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNI LLPKK Sbjct: 13 AKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120
BLAST of DY271156 vs. ExPASy Swiss-Prot
Match: H2A3_LYTPI (Histone H2A, sperm (Fragment) OS=Lytechinus pictus PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.504e-31 Identity = 68/107 (63.55%), Postives = 76/107 (71.03%), Query Frame = 2 Query: 128 SRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGK 448 SRS +AGLQFPVGR+ RFL+ G YA+RVGAGAP GNAA DNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNI LLPKK K Sbjct: 3 SRSSRAGLQFPVGRVHRFLRKGNYAQRVGAGAPVYLAAVFEYLAAEILELAGNAAPDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTAK 109 The following BLAST results are available for this feature:
BLAST of DY271156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271156 ID=DY271156; Name=DY271156; organism=Citrus clementina; type=EST; length=729bpback to top |