DY271171

Overview
NameDY271171
Unique NameDY271171
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length968
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271171 vs. ExPASy Swiss-Prot
Match: HUTH_BACAC (Histidine ammonia-lyase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=hutH PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 5.553e-23
Identity = 72/235 (30.64%), Postives = 117/235 (49.79%), Query Frame = 1
Query:    1 GETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGG--ALQKELIRFLNAGIFGN*TESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMGLFEANNPALLSEILSAIFAEVLQG 699
            G TLT+ ++  +      V    ++ + V    + V + +  G   YG+TTGFG  S    +     ALQ  LI+    GI           P   +R  +++R NT+L+G SG+R  ++  + + +N  I P +P +G++ ASGDL PLS++A +L G          G+ + A  A  + G    EL+ KEGLAL+NGT   +    +   EA   A  +E+++++  E LQG
Sbjct:    6 GHTLTIEEMKRLLLEGEGVTACPTSMQKVAECREVVEKIVENGKVVYGITTGFGKFSDVLIQKDDVKALQHNLIQSHACGI-------GDPFPEEVSRGMLILRANTMLKGVSGVRPLVVNMLLEFVNRKIHPVVPQQGSLGASGDLAPLSHLALILLGEGE---VFYKGKRVHAMVALTEEGLEPIELEAKEGLALINGTQAMTAQGVLSYIEAEATAYQAELIASMTIEGLQG 230          
BLAST of DY271171 vs. ExPASy Swiss-Prot
Match: HUTH_BACAA (Histidine ammonia-lyase OS=Bacillus anthracis (strain A0248) GN=hutH PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 5.553e-23
Identity = 72/235 (30.64%), Postives = 117/235 (49.79%), Query Frame = 1
Query:    1 GETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGG--ALQKELIRFLNAGIFGN*TESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMGLFEANNPALLSEILSAIFAEVLQG 699
            G TLT+ ++  +      V    ++ + V    + V + +  G   YG+TTGFG  S    +     ALQ  LI+    GI           P   +R  +++R NT+L+G SG+R  ++  + + +N  I P +P +G++ ASGDL PLS++A +L G          G+ + A  A  + G    EL+ KEGLAL+NGT   +    +   EA   A  +E+++++  E LQG
Sbjct:    6 GHTLTIEEMKRLLLEGEGVTACPTSMQKVAECREVVEKIVENGKVVYGITTGFGKFSDVLIQKDDVKALQHNLIQSHACGI-------GDPFPEEVSRGMLILRANTMLKGVSGVRPLVVNMLLEFVNRKIHPVVPQQGSLGASGDLAPLSHLALILLGEGE---VFYKGKRVHAMVALTEEGLEPIELEAKEGLALINGTQAMTAQGVLSYIEAEATAYQAELIASMTIEGLQG 230          
BLAST of DY271171 vs. ExPASy Swiss-Prot
Match: HUTH_PARDP (Histidine ammonia-lyase OS=Paracoccus denitrificans (strain Pd 1222) GN=hutH PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 7.253e-23
Identity = 74/235 (31.49%), Postives = 120/235 (51.06%), Query Frame = 1
Query:    1 GETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFG--ATSHRRTKNGGALQKELIRFLNAGIFGN*TESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMGLFEANNPALLSEILSAIFAEVLQG 699
            GET T+AQ+  +      V L++SAR G+  S+  +  + N     YGV TGFG  A+     ++   LQ+ LI     G+          +     R  M++++ +L +G SG+R E+++ I  +L   + P +P +G++ ASGDL PL+++A  + G   +      G  + + EA   AG     L  KEGLAL+NGT V +  A  GLFEA   A  + + S++  + + G
Sbjct:    9 GET-TLAQLEQVWRQGLAVRLADSARPGIAESAARIAAAANGEAPVYGVNTGFGKLASIKIAARDTATLQRNLILSHCCGV-------GEPVEPETVRLIMVLKLLSLGRGASGVRPEVIQLIEDMLARGVLPVIPSQGSVGASGDLAPLAHMAAAMLGEGRAV---HEGREMSSAEALASAGLKPVVLAAKEGLALINGTQVSTAFALAGLFEAFASARAALVTSSLSTDAIMG 232          
BLAST of DY271171 vs. ExPASy Swiss-Prot
Match: HUTH_BACCR (Histidine ammonia-lyase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=hutH PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 7.253e-23
Identity = 73/235 (31.06%), Postives = 117/235 (49.79%), Query Frame = 1
Query:    1 GETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGG--ALQKELIRFLNAGIFGN*TESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMGLFEANNPALLSEILSAIFAEVLQG 699
            G TLTV ++  +      V    ++ + V    + V + +  G   YG+TTGFG  S    +     ALQ  LI+    GI           P   +R  +++R NT+L+G SG+R  ++  + + +N  I P +P +G++ ASGDL PLS++A +L G          G+ + A  A  + G    EL+ KEGLAL+NGT   +    +   EA   A  +E+++++  E LQG
Sbjct:    7 GHTLTVEEMKRLLLEGEGVTACPTSMQKVAECREVVEKIVEDGKVVYGITTGFGKFSDVLIQKDDVKALQHNLIQSHACGI-------GDPFPEEVSRGMLILRANTMLKGVSGVRPLVVNMLLEFVNRKIHPVVPQQGSLGASGDLAPLSHLALVLLGEGE---VFYKGKRVHAMVALTEEGLEPIELEAKEGLALINGTQAMTAQGVLSYIEAEATAYQAELIASMTIEGLQG 231          
BLAST of DY271171 vs. ExPASy Swiss-Prot
Match: HUTH_BACC4 (Histidine ammonia-lyase OS=Bacillus cereus (strain B4264) GN=hutH PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 7.253e-23
Identity = 73/235 (31.06%), Postives = 117/235 (49.79%), Query Frame = 1
Query:    1 GETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGG--ALQKELIRFLNAGIFGN*TESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMGLFEANNPALLSEILSAIFAEVLQG 699
            G TLTV ++  +      V    ++ + V    + V + +  G   YG+TTGFG  S    +     ALQ  LI+    GI           P   +R  +++R NT+L+G SG+R  ++  + + +N  I P +P +G++ ASGDL PLS++A +L G          G+ + A  A  + G    EL+ KEGLAL+NGT   +    +   EA   A  +E+++++  E LQG
Sbjct:    7 GHTLTVEEMKRLLLEGEGVTACPTSMQKVAECREVVEKIVEDGKVVYGITTGFGKFSDVLIQKDDVKALQHNLIQSHACGI-------GDPFPEEVSRGMLILRANTMLKGVSGVRPLVVNMLLEFVNRKIHPVVPQQGSLGASGDLAPLSHLALVLLGEGE---VFYKGKRVHAMVALTEEGLEPIELEAKEGLALINGTQAMTAQGVLSYIEAEATAYQAELIASMTIEGLQG 231          
BLAST of DY271171 vs. ExPASy Swiss-Prot
Match: HUTH_BACC1 (Histidine ammonia-lyase OS=Bacillus cereus (strain ATCC 10987) GN=hutH PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 7.253e-23
Identity = 72/235 (30.64%), Postives = 117/235 (49.79%), Query Frame = 1
Query:    1 GETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGG--ALQKELIRFLNAGIFGN*TESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMGLFEANNPALLSEILSAIFAEVLQG 699
            G TLT+ ++  +      V    ++ + V    + V + +  G   YG+TTGFG  S    +     ALQ  LI+    GI           P   +R  +++R NT+L+G SG+R  ++  + + +N  I P +P +G++ ASGDL PLS++A +L G          G+ + A  A  + G    EL+ KEGLAL+NGT   +    +   EA   A  +E+++++  E LQG
Sbjct:    6 GHTLTIEEMKRLLLEGEGVTACPTSMQKVAECREVVEKIVEDGKVVYGITTGFGKFSDVLIQKDDVKALQHNLIQSHACGI-------GEPFPEEVSRGMLILRANTMLKGVSGVRPLVVNMLLEFVNRKIHPVVPQQGSLGASGDLAPLSHLALVLLGEGE---VFYKGKRVHAMVALTEEGLEPIELEAKEGLALINGTQAMTAQGVLSYIEAEATAYQAELIASMTIEGLQG 230          
BLAST of DY271171 vs. ExPASy Swiss-Prot
Match: HUTH_BACC0 (Histidine ammonia-lyase OS=Bacillus cereus (strain AH820) GN=hutH PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 7.253e-23
Identity = 72/235 (30.64%), Postives = 117/235 (49.79%), Query Frame = 1
Query:    1 GETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGG--ALQKELIRFLNAGIFGN*TESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMGLFEANNPALLSEILSAIFAEVLQG 699
            G TLT+ ++  +      V    ++ + V    + V + +  G   YG+TTGFG  S    +     ALQ  LI+    GI           P   +R  +++R NT+L+G SG+R  ++  + + +N  I P +P +G++ ASGDL PLS++A +L G          G+ + A  A  + G    EL+ KEGLAL+NGT   +    +   EA   A  +E+++++  E LQG
Sbjct:    6 GHTLTIEEMKRLLLEGEGVTACPTSMQKVAECREVVEKIVENGKVVYGITTGFGKFSDVLIQKDDVKALQHNLIQSHACGI-------GDPFPEEVSRGMLILRANTMLKGVSGVRPLVVNMLLEFVNRKIHPVVPQQGSLGASGDLAPLSHLALVLLGEGE---VFYKGKRVHAMVALTEEGLEPIELEAKEGLALINGTQAMTAQGVLSYIEAEATAYQAELIASMTIEGLQG 230          
BLAST of DY271171 vs. ExPASy Swiss-Prot
Match: HUTH_PSYCK (Histidine ammonia-lyase OS=Psychrobacter cryohalolentis (strain K5) GN=hutH PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 9.473e-23
Identity = 69/215 (32.09%), Postives = 114/215 (53.02%), Query Frame = 1
Query:   61 LSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGA--LQKELIRFLNAGIFGN*TESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMGLFEANNPALLSEILSAIFAEVLQG 699
            L +SA E + AS + V   + +   +YG+ TGFG  +  R  +     LQ+ LI   + G       +   LP +  R  M+++V +L QG SG+R  +++++  L+N+ ITP +P +G++ ASGDL PLS++   + G  +      +G  + A +A  Q G     L  KEGLAL+NGT V + LA  G F A +    + I+ ++  +  +G
Sbjct:   31 LPDSAYEAIDASHEDVQTIIRRDKSAYGINTGFGLLAKTRISDDQLELLQRNLIVSHSVG-------TGEALPANVVRLIMVMKVTSLAQGVSGVRRAVVDSLLGLINNQITPNIPAKGSVGASGDLAPLSHMTLAMMGEGHVYV---DGNKVLAADALAQHGLEPITLAAKEGLALINGTQVSTALALRGYFLARDLLETATIVGSLSIDAAKG 235          
BLAST of DY271171 vs. ExPASy Swiss-Prot
Match: HUTH_HUMAN (Histidine ammonia-lyase OS=Homo sapiens GN=HAL PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 9.473e-23
Identity = 74/235 (31.49%), Postives = 121/235 (51.49%), Query Frame = 1
Query:    1 GETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFG--ATSHRRTKNGGALQKELIRFLNAGIFGN*TESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMGLFEANNPALLSEILSAIFAEVLQG 699
            G+ LT   +  +      ++L+ +A + V+ S + +   + + T  YG+TTGFG  A +         LQ  L+R  ++G+          L     R  + +R+N L +GYSGI  E L+ + ++ N +  P +P +GT+ ASGDL PLS++A  L G    K   P     DA+   +  G     L+PKEGLAL+NGT + + L    +  A+  A  ++I++A+  EVL+G
Sbjct:  118 GDRLTTEDLVNLGKGRYKIKLTPTAEKRVQKSREVIDSIIKEKTVVYGITTGFGKFARTVIPINKLQELQVNLVRSHSSGV-------GKPLSPERCRMLLALRINVLAKGYSGISLETLKQVIEMFNASCLPYVPEKGTVGASGDLAPLSHLALGLVG--EGKMWSPKSGWADAKYVLEAHGLKPVILKPKEGLALINGTQMITSLGCEAVERASAIARQADIVAALTLEVLKG 343          
BLAST of DY271171 vs. ExPASy Swiss-Prot
Match: HUTH_BURVG (Histidine ammonia-lyase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=hutH PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 9.473e-23
Identity = 70/232 (30.17%), Postives = 120/232 (51.72%), Query Frame = 1
Query:   10 LTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFG--ATSHRRTKNGGALQKELIRFLNAGIFGN*TESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMGLFEANNPALLSEILSAIFAEVLQG 699
            LT+ Q+  IA  S  ++L  ++   + A +  V +   KG  +YG+ TGFG  A++H        LQK L+     G+          +  S+ R  M +++++L +G+SGIR E+++A+  L N ++ P +P++G++ ASGDL PL++++ +L G          GE   A +  + AG     LQ KEGLAL+NGT   + LA   +F   +    + +  A+  +   G
Sbjct:    9 LTLPQLRRIARESVQLQLDPASFAKIDAGAKAVADIAAKGEPAYGINTGFGRLASTHIPHDQLELLQKNLVLSHAVGV-------GEPMARSSVRLLMALKLSSLGRGHSGIRREVMDALITLFNADVLPLIPVKGSVGASGDLAPLAHMSAVLLG---VGEVFIRGERASALDGLRVAGLAPLTLQAKEGLALLNGTQASTALALDNMFAIEDLYRTALVAGALSVDAAAG 230          
The following BLAST results are available for this feature:
BLAST of DY271171 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 250
Match NameE-valueIdentityDescription
HUTH_BACAC5.553e-2330.64Histidine ammonia-lyase OS=Bacillus anthracis (str... [more]
HUTH_BACAA5.553e-2330.64Histidine ammonia-lyase OS=Bacillus anthracis (str... [more]
HUTH_PARDP7.253e-2331.49Histidine ammonia-lyase OS=Paracoccus denitrifican... [more]
HUTH_BACCR7.253e-2331.06Histidine ammonia-lyase OS=Bacillus cereus (strain... [more]
HUTH_BACC47.253e-2331.06Histidine ammonia-lyase OS=Bacillus cereus (strain... [more]
HUTH_BACC17.253e-2330.64Histidine ammonia-lyase OS=Bacillus cereus (strain... [more]
HUTH_BACC07.253e-2330.64Histidine ammonia-lyase OS=Bacillus cereus (strain... [more]
HUTH_PSYCK9.473e-2332.09Histidine ammonia-lyase OS=Psychrobacter cryohalol... [more]
HUTH_HUMAN9.473e-2331.49Histidine ammonia-lyase OS=Homo sapiens GN=HAL PE=... [more]
HUTH_BURVG9.473e-2330.17Histidine ammonia-lyase OS=Burkholderia vietnamien... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YB07FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271171 ID=DY271171; Name=DY271171; organism=Citrus clementina; type=EST; length=968bp
GGTGAGACGTTGACCGTAGCACAGGTGGCTGCCATTGCCACGTCCTCTAC
GAATGTGGAGCTGTCGGAATCTGCCAGGGAAGGCGTCAAGGCCAGCAGTG
ATTGGGTGATGGAGAGCATGAATAAGGGTACCGACAGTTACGGCGTTACC
ACTGGCTTTGGTGCCACTTCTCATCGGAGAACCAAGAACGGCGGTGCTCT
TCAGAAGGAGCTCATTAGATTTTTGAACGCTGGAATCTTTGGAAACTGAA
CAGAGTCATCTCACACGCTACCTCACTCAGCAACAAGGGCAGCCATGCTT
GTGAGGGTTAACACTCTTCTCCAGGGCTACTCCGGCATCCGATTTGAAAT
CCTGGAAGCGATCACAAAGCTGCTCAATCACAACATCACTCCATGCCTCC
CTCTTCGCGGCACAATCACTGCTTCAGGGGATCTGGTTCCTCTTTCCTAC
ATTGCCGGACTGCTCACCGGCCGGCCCAATTCTAAGGCCACCGGGCCTAA
TGGAGAGATCATTGATGCCCAGGAAGCCTCTAAACAAGCGGGTTTCGGGT
TCTTTGAGTTGCAGCCTAAGGAGGGTCTTGCTCTTGTCAATGGCACTGCT
GTTGGTTCTGGCCTGGCTTCTATGGGTCTGTTTGAGGCTAACAACCCTGC
TCTGTTATCAGAAATTTTGTCAGCTATTTTTGCTGAAGTCCTGCAAGGCA
AACCGGAGTTCCACCAACCCTTGACACCCAAATTGAAACCACCATCCTGG
CCAAATTGAGGCTGCTGCCAAAAAGGAACCTATCCCCCAGGGGACCCCTT
ATTTTAACGTGGCCAAAAATTTGCCTGAAATTTAACCCCTGCCAAAACCC
AAAAAGAAACGTTAGCCCCGGAAATTCCCCCCAAAGGGCCCCCCCCCCAA
AAAAAGTGATCCGTTTTGCCCCCTTCTATTGAAACGGAAAACCCCCCGGG
AAAAAAAAACCCCCCGAA
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