DY271182
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_PYRKO (50S ribosomal protein L11P OS=Pyrococcus kodakaraensis GN=rpl11p PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.645e-20 Identity = 60/158 (37.97%), Postives = 98/158 (62.03%), Query Frame = 1 Query: 40 SQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKV----AVVPSAAALVIKALKEPERDRKKTKNIKHN--GNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 495 +QVV+V V GG+ L P IGPLGL+ K++ ++I K T K+++G++V VK+ V++ + K +P + L+ K L P K + H GN+T++ VI+IAK+ + +A +L KE++GT +S+G TV+GKDPR++Q+EI +G Sbjct: 2 AQVVEVLVE--GGKASPGPPLGPAIGPLGLNVKQVVDEINKAT-KEFEGMQVPVKIIVEDPKKKTFRIEVGIPPTSQLIKKELGIP----KGSSEAGHTPAGNLTMEQVIKIAKMKIDQMLAPNLKAAAKEVIGTALSMGVTVEGKDPREVQREIDEG 152
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_METJA (50S ribosomal protein L11P OS=Methanocaldococcus jannaschii GN=rpl11p PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 2.149e-20 Identity = 58/150 (38.67%), Postives = 90/150 (60.00%), Query Frame = 1 Query: 55 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 495 V V VTGG A L P IGPLG++ ++ ++I ++T KD++G++V VK+ V K + +P AL+ K L + + GN+TL+ VI+IAK+ + ++ L VKE+LGTC S+G TV+GKDP+++Q+EI G Sbjct: 6 VEVLVTGGRATAGPPLGPAIGPLGVNVMQVVKEINEKT-KDYEGMQVPVKVIVDTETRKFEIEVGIPPTTALIKKELGIETAAHEPRHEVV--GNLTLEQVIKIAKMKKDAMLSYTLKNAVKEVLGTCGSMGVTVEGKDPKEVQKEIDAG 152
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_THEAC (50S ribosomal protein L11P OS=Thermoplasma acidophilum GN=rpl11p PE=3 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 2.807e-20 Identity = 55/155 (35.48%), Postives = 92/155 (59.35%), Query Frame = 1 Query: 55 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAK----VAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEI 507 V V GG+ + P +GPLGL+ ++ ++I ++T K+++G+RV V +TV + + K +P +AL+ K L + K+ + I GN TLD ++++AK +A DL E+LGTCVS+G VDGKDP+++Q++I G++ I Sbjct: 5 VKTMVEGGKATTGPPIGPALGPLGLNVAQVVKEINEKT-KEFQGMRVPVTITVVDPETKKYEITVGIPPTSALLKKKLGIEKGAAKRKEAIA--GNATLDQIVDVAKTKMASMLASDLKAATLEVLGTCVSMGINVDGKDPKEVQRQIKAGEISI 156
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_PYRAB (50S ribosomal protein L11P OS=Pyrococcus abyssi GN=rpl11p PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 4.788e-20 Identity = 63/156 (40.38%), Postives = 96/156 (61.54%), Query Frame = 1 Query: 43 QVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQ--NRQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHN--GNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 495 QVV+V V GG+ L P IGPLGL+ K++ + I E K++ G++V VK+ V +Q ++ V VP + L+ K L K + KHN GN+T++ VI+IAK+ R + +A L KE++GT +S+G TV+GKDPR++Q+EI +G Sbjct: 4 QVVEVLVE--GGKATPGPPLGPAIGPLGLNVKQVVDKI-NEATKEFAGMQVPVKIIVDPVTKQFEIEVGVPPTSQLIKKELGL----EKGSGEPKHNIVGNLTMEQVIKIAKMKRNQMLALTLKAAAKEVIGTALSMGVTVEGKDPREVQREIDEG 152
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_THEGJ (50S ribosomal protein L11P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rpl11p PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 8.166e-20 Identity = 58/155 (37.42%), Postives = 96/155 (61.94%), Query Frame = 1 Query: 43 QVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKV----AVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 495 QVV+V V GG+ L P IGPLGL+ K++ ++I K T K+++G++V VK+ V++ + K +P + L+ K L P+ + + GN+T++ VI+IAK+ + +A L KE++GT +S+G TV+GKDPR++Q+EI +G Sbjct: 3 QVVEVLVE--GGKASPGPPLGPAIGPLGLNVKQVVDEINKAT-KEFEGMQVPVKIIVEDPKKKTFRIEVGIPPTSQLIKKELGIPKGSSEPVHSPV--GNLTMEQVIKIAKMKIDQMLAPTLKAASKEVIGTALSMGVTVEGKDPREVQREIDEG 152
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_PYRHO (50S ribosomal protein L11P OS=Pyrococcus horikoshii GN=rpl11p PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.393e-19 Identity = 63/156 (40.38%), Postives = 95/156 (60.90%), Query Frame = 1 Query: 43 QVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQ--NRQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHN--GNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 495 QVV+V V GG+ L P IGPLGL+ K++ + I E K++ G++V VK+ V +Q ++ V VP + L+ K L K + KHN GN+T++ VI+IAK+ R + +A L KE++GT +S+G TV+GKDPR +Q+EI +G Sbjct: 4 QVVEVLVE--GGKATPGPPLGPAIGPLGLNVKQVVDKI-NEATKEFAGMQVPVKIIVDPVTKQFEIEVGVPPTSQLIKKELGL----EKGSGEPKHNIVGNLTMEQVIKIAKMKRSQMLALTLKAAAKEVIGTALSMGVTVEGKDPRIVQREIDEG 152
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_METVS (50S ribosomal protein L11P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpl11p PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.540e-18 Identity = 55/157 (35.03%), Postives = 93/157 (59.24%), Query Frame = 1 Query: 43 QVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVE 504 QVV++ V TGG+ A L P IGPLG++ ++ + I +T KD++G+ V VK+ V+ + V +P A+AL+ K L ++ + GNIT++ +++IAK+ + +A L KE++GTCVSVG V+GK P++ Q+ + G+ + Sbjct: 4 QVVEILV--TGGKATAGPPLGPAIGPLGVNIMQVVQMINTKT-KDYEGMSVPVKVIVETTKRTFEVEVGIPPASALIKKELGLESGSQEPKHKVA--GNITMEKIVKIAKMKQDAMLAYTLKSAAKEVIGTCVSVGVNVEGKTPKEAQKAVDAGEFD 155
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_METKA (50S ribosomal protein L11P OS=Methanopyrus kandleri GN=rpl11p PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 2.011e-18 Identity = 53/150 (35.33%), Postives = 96/150 (64.00%), Query Frame = 1 Query: 52 DVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTV--QNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 495 +V V + GG+ L P +GPLG++ +++ E+I ++T KD+KG+ V VK+ V + R+ +V V + +IK+ ++ + ++ + G+++++ VI+IAK+ ++ DL KEILGTC S+G TV+GKDP+++Q+EI +G Sbjct: 5 EVEVLIEGGKADPGPPLGPALGPLGVNIQEVVEEINRKT-KDFKGMEVPVKIIVDTETREFEVKVGSPPTSAIIKSELGIDKGAHEPRH-ETVGDLSMEQVIKIAKMKFDDLLSYDLKTAAKEILGTCGSMGVTVEGKDPKEVQKEIDEG 152
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_THEVO (50S ribosomal protein L11P OS=Thermoplasma volcanium GN=rpl11p PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 4.481e-18 Identity = 54/155 (34.84%), Postives = 91/155 (58.71%), Query Frame = 1 Query: 55 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAK----VAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEI 507 V V GG+ + P +GPLGL+ ++ ++I ++T K+++G++V V +TV + + K VP +AL+ K L + KK + + GN TL+ + +A P +AKDL V E+LGTCV++G V+GKDP+++Q+ I G ++I Sbjct: 5 VKTMVEGGKATTGPPIGPALGPLGLNVAQVVKEINEKT-KEFQGMQVPVTVTVIDPETKKYEITVGVPPTSALLKKELGLEKGASKKKEAVA--GNATLEQIKNVAIKKMPSMLAKDLKSAVLEVLGTCVAMGINVEGKDPKEVQKLIKSGQIKI 156
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_HYPBU (50S ribosomal protein L11P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rpl11p PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 4.481e-18 Identity = 59/152 (38.82%), Postives = 83/152 (54.61%), Query Frame = 1 Query: 55 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVV---PSAAALVIKAL--KEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 495 + V+V GGE A LAP I LGL K+ EDI K T K +KG V VKL V + + P+ L++KA+ EP D K G++ + ++EIA + +P AK L VK ILG+ S+G TVDGKDP+ + +E+ +G Sbjct: 6 INVKVRGGEAKPAPPLAPAIEKLGLDVNKVVEDINKATEK-YKGFEVAVKLIVDENTKEYEIEVKPPTTTELLLKAVGASEPSGDPMHQKI----GDLPFEKIVEIAILKKPSLNAKTLKAAVKTILGSARSIGITVDGKDPKQVTKEVEEG 152 The following BLAST results are available for this feature:
BLAST of DY271182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271182 ID=DY271182; Name=DY271182; organism=Citrus clementina; type=EST; length=1027bpback to top |