DY271182
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_PICTO (50S ribosomal protein L11P OS=Picrophilus torridus GN=rpl11p PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 9.983e-18 Identity = 55/158 (34.81%), Postives = 95/158 (60.13%), Query Frame = 1 Query: 46 VVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAK----VAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEI 507 +V V V GG+ L P +GPLGL+ ++ +DI ++T K++ G++V V + V + K + VP +AL+ K L + KK + I GN TL+ + ++A+ R ++ ++ G V E+LG+ VS+G TVDG+DP+++Q+ I +G++EI Sbjct: 1 MVAVKTMVEGGKATTGPPLGPALGPLGLNLGQVVKDINEKT-KNFAGMQVPVTVNVIDPATKKYEIIVGVPPTSALLKKELGIEKGASKKKEKIA--GNATLEQIKKVAESKRSALLSYNMKGAVLEVLGSAVSLGITVDGRDPKEVQKMIKNGEIEI 155
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_METTH (50S ribosomal protein L11P OS=Methanobacterium thermoautotrophicum GN=rpl11p PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.304e-17 Identity = 53/150 (35.33%), Postives = 91/150 (60.67%), Query Frame = 1 Query: 55 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQN--RQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 495 V + + GG+ L P IGPLG++ ++ E+I ++TA D++G++V VK+ V R +V V P AL++ LK + + + +I+++ V++IA++ ++ D VKEI+GTCVS+G TV+GKDPR++Q+E+ G Sbjct: 6 VEILIDGGKATPGPPLGPAIGPLGINMMQVVEEINRKTA-DFEGMKVPVKIIVDTDTRDFEVEVGTPPTTALIMDELKLEKGSQDP--GMDKIADISMEQVLKIARMKFDALLSNDYKRAVKEIMGTCVSMGITVNGKDPREVQREVDQG 152
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_METHJ (50S ribosomal protein L11P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rpl11p PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.304e-17 Identity = 53/150 (35.33%), Postives = 87/150 (58.00%), Query Frame = 1 Query: 55 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQ---AKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 495 V V V GG+ A L P +GPLG++ K + ++I K+TA + G++V V++ V ++ V + P+ A ++ +A E TK + G++ L+ + IAK+ ++ DL VKE++GTCVS+G TV GK P+D+ +EI G Sbjct: 5 VEVLVPGGKATAGPPLGPALGPLGINVKAVVDEINKKTAS-FNGMQVPVRVEVDEKKNFTISVGIPPTTALIMKEAGVEKGSGEPNTKIV---GDVPLEAAVTIAKMKLDDMLSYDLKNAVKEVVGTCVSLGITVSGKKPKDMLKEIDSG 150
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_METMJ (50S ribosomal protein L11P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rpl11p PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.703e-17 Identity = 54/152 (35.53%), Postives = 89/152 (58.55%), Query Frame = 1 Query: 55 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVV--PSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVE 504 V V V GG+ A L P +GPLG++ K + +DI K+TA ++ G++V V +TV +++ V P ALV+K + + + G++ L+ + IA++ ++ DL VKE+LGTCVSVG TV+GK PR++ Q + +G+ + Sbjct: 5 VEVLVPGGKATAGPPLGPALGPLGINVKAVVDDINKKTA-EFNGMQVPVTVTVDDKKNFTIEVGIPPTTALVMKEAGITKGSTEPGALVA--GDLPLEAAVRIARMKFDGMLSYDLKSAVKEVLGTCVSVGVTVEGKKPREMIQAVNNGEYD 153
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_UNCMA (50S ribosomal protein L11P OS=Uncultured methanogenic archaeon RC-I GN=rpl11p PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 6.471e-17 Identity = 53/149 (35.57%), Postives = 85/149 (57.05%), Query Frame = 1 Query: 55 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQ-NRQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 495 V V V GG+ L P +GPLG++ KK+ ++I +T KD+ G+ V VK+ V +R V V P +ALV+ LK + T N G++T++ I++A++ R ++ L VKE+ GTCVS+G ++GK P++ E+ G Sbjct: 5 VEVLVPGGKANPGPPLGPALGPLGINIKKVVDEINNKT-KDYNGMTVPVKVIVDASRNFTVEVGTPPTSALVLSELKLEKGSG--TPNTNFIGSLTIEQAIKVAQMKRDAMLSYTLKNAVKEVAGTCVSLGVMIEGKKPKEFIAEVNAG 150
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_METM7 (50S ribosomal protein L11P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl11p PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 6.471e-17 Identity = 54/157 (34.39%), Postives = 89/157 (56.69%), Query Frame = 1 Query: 43 QVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVE 504 QVV++ V +GG+ A L P IGPLG++ ++ + I E KD+ G+ V VK+ V + V +P A+ALV K L ++ + GN+T++ V++IAK+ + +A +L KE++GTCVSVG V+G P++ Q+ + G + Sbjct: 4 QVVEILV--SGGKATAGPPLGPAIGPLGVNIMQVVQKI-NEMTKDYDGMSVPVKVIVNTDKRTFEVEVGIPPASALVKKELGITTGSQEPKHQVA--GNLTMEQVVKIAKMKQDAMLAYNLKNASKEVIGTCVSVGVNVEGMTPKEAQKAVDAGQFD 155
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_METM6 (50S ribosomal protein L11P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl11p PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 6.471e-17 Identity = 54/157 (34.39%), Postives = 89/157 (56.69%), Query Frame = 1 Query: 43 QVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVE 504 QVV++ V +GG+ A L P IGPLG++ ++ + I E KD+ G+ V VK+ V + V +P A+ALV K L ++ + GN+T++ V++IAK+ + +A +L KE++GTCVSVG V+G P++ Q+ + G + Sbjct: 4 QVVEILV--SGGKATAGPPLGPAIGPLGVNIMQVVQKI-NEMTKDYDGMSVPVKVIVNTDKRTFEVEVGIPPASALVKKELGITTGSQEPKHQVA--GNLTMEQVVKIAKMKQDAMLAYNLKNASKEVIGTCVSVGVNVEGMTPKEAQKAVDAGQFD 155
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_METS5 (50S ribosomal protein L11P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rpl11p PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 8.451e-17 Identity = 60/154 (38.96%), Postives = 83/154 (53.90%), Query Frame = 1 Query: 55 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAK--ETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIK--ALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 495 + V V GG V LAP + LGL+ +GE + K E +KG+ V V L V K V VP+ +L++K P D + K GNI++DDVIE+A +P AK+L G VK ILGT S+G TVD KDP+ + +E+ +G Sbjct: 6 IKVVVEGGNVKPGPPLAPTLSQLGLN---VGEVVKKINEATSQFKGMTVPVTLDVDTDTKKYEVSVGVPTTTSLLVKKAGASGPSGDPEHKKI----GNISMDDVIEVAISKKPSLTAKELKGAVKSILGTAKSIGLTVDNKDPKLVVREVEEG 152
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_METMP (50S ribosomal protein L11P OS=Methanococcus maripaludis GN=rpl11p PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.104e-16 Identity = 56/159 (35.22%), Postives = 92/159 (57.86%), Query Frame = 1 Query: 43 QVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIKALKEPERDRKKTKNIKHN--GNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVE 504 QVV++ V +GG+ A L P IGPLG++ ++ + I T KD++G+ V VK+ V + V +P A+AL+ K + K ++ KH GNIT++ +++IAK+ + +A +L KE++GTCVSVG +V+G P + Q+ I G + Sbjct: 4 QVVEILV--SGGKATAGPPLGPAIGPLGVNIMQVVQKINNMT-KDYEGMSVPVKVIVDTDKRTFEVEVGIPPASALIKKEIGI----EKGSQEPKHQVAGNITMEQIVKIAKMKQDAMLAYNLKNASKEVVGTCVSVGISVEGMTPSEAQKAIDAGQFD 155
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_KORCO (50S ribosomal protein L11P OS=Korarchaeum cryptofilum (strain OPF8) GN=rpl11p PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.104e-16 Identity = 50/150 (33.33%), Postives = 86/150 (57.33%), Query Frame = 1 Query: 55 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 495 V V + GG+ L P +G LGL+ +I ++I ++T+ + G+RV V++ V K + P + L+++ LK + +K I GN+ ++ V+ IAK+ S +L VK++LGT +S+G TV+GKDPR++Q+E+ G Sbjct: 6 VRVLIEGGKATPGPPLGPALGGLGLNMGQIVKEINEKTSS-YSGMRVPVEIEVDTETKKFEIRVGTPPTSMLILRELKAEKGSSDASKKI---GNLKMETVVNIAKMKLASSNTPELKQVVKQVLGTALSMGVTVEGKDPREVQREVDSG 151 The following BLAST results are available for this feature:
BLAST of DY271182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271182 ID=DY271182; Name=DY271182; organism=Citrus clementina; type=EST; length=1027bpback to top |