DY271182
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_METPE (50S ribosomal protein L11P OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=rpl11p PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.441e-16 Identity = 52/156 (33.33%), Postives = 92/156 (58.97%), Query Frame = 1 Query: 55 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQ-AKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIPLD 516 V V V GG A + P +GPLG++ K + +DI K+TA ++ G++V VK+ V +++ ++V +P ALV+K + + + I G++ ++ + IA++ ++ +L VKE++GTCVSVG TVDGK P+++ I+ G + L+ Sbjct: 5 VEVLVPGGRATAGPPIGPALGPLGINVKAVVDDINKKTA-EFNGMQVPVKIEVDDKKNVTISVGIPPTTALVMKEVGIEKGSAEPNSIIV--GDLPIEAAVRIARMKLDDMLSYELKTAVKEVIGTCVSVGVTVDGKKPKEILAAISAGQYDSVLE 157
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_METM5 (50S ribosomal protein L11P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl11p PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.883e-16 Identity = 54/157 (34.39%), Postives = 89/157 (56.69%), Query Frame = 1 Query: 43 QVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVE 504 QVV++ V +GG+ A L P IGPLG++ ++ + I + KD+ G+ V VK+ V + V +P A+ALV K L ++ + GN+T++ V++IAK+ + +A +L KE++GTCVSVG V+G P++ Q+ I G + Sbjct: 4 QVVEILV--SGGKATAGPPLGPAIGPLGVNIMQVVQKI-NDMTKDYDGMSVPVKVIVDTDKRTFEVEVGIPPASALVKKELGIATGAQEPKHQVA--GNLTMEQVVKIAKMKQDAMLAYNLKNASKEVIGTCVSVGVNVEGMTPKEAQKAIDAGQFD 155
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_META3 (50S ribosomal protein L11P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl11p PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 4.194e-16 Identity = 55/158 (34.81%), Postives = 93/158 (58.86%), Query Frame = 1 Query: 40 SQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQ--NRQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVE 504 ++VVDV V TGG+ A L P +GPLG++ + ++I ++T KD+ G+ V VK+ V +R ++ V +P +AL IK ++ + K I GN++++ ++IAK+ + ++ L KE++GTCVS G V+G PRD Q+ I G+ + Sbjct: 3 TEVVDVLV--TGGKATAGPPLGPAVGPLGINIMNVVKEINEKT-KDYAGMSVPVKVIVNTDDRSFEIEVGIPPTSAL-IKTELGLDKGSTEPKAIVA-GNLSMEQAVKIAKMKKDSMLSFTLKNATKEVIGTCVSTGINVEGMSPRDAQKAIDAGEFD 155
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_METLZ (50S ribosomal protein L11P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rpl11p PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 7.154e-16 Identity = 54/150 (36.00%), Postives = 81/150 (54.00%), Query Frame = 1 Query: 55 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVV--PSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGD 498 V V V GG A L P +GPLG++ K + +DI K+TA ++ G+ V V + V +++ V P ALV+K + T N + GN+ L+ VI IAK+ ++ DL KE++GTCVSVG TV+GK + + G+ Sbjct: 5 VEVLVPGGRATAGPPLGPALGPLGINVKAVVDDINKKTA-EFNGMSVPVTVMVDDKKNVTLTVGIPPTTALVMK--EAGVEKGSGTPNTQAVGNLPLEAVIRIAKMKMESMLSYDLKTAAKEVMGTCVSVGVTVEGKTAKQAIAAVNAGE 151
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_METBF (50S ribosomal protein L11P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl11p PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.220e-15 Identity = 48/145 (33.10%), Postives = 87/145 (60.00%), Query Frame = 1 Query: 67 VTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQ-AKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 495 V GG+ L P +GPLG++ K++ E I ++T +D+ G++V VK+ V +++ ++ V P A+L++K L + + GNI++ V +IA++ + ++ DL T+KE++GTCV +G TV+G + RD Q+ + G Sbjct: 9 VPGGKANPGPPLGPALGPLGVNIKEVVEKINEKT-RDYNGMQVPVKVIVDDKKNVEIEVGTPPTASLIMKELGIQKGSGNAGSEVV--GNISISQVAKIARMKKEDVLSYDLKATMKEVMGTCVPMGVTVEGVEARDSQKALDQG 150
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_SULIM (50S ribosomal protein L11P OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rpl11p PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 2.081e-15 Identity = 53/154 (34.42%), Postives = 83/154 (53.90%), Query Frame = 1 Query: 55 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAK--ETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIK--ALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 495 + + V GG V LAP + LGL+ +GE + K E +KG+ V V + V + K + +P+ AL++K + EP D K GN++L+ VI+IA + +P K L VK +LGT S+G TV+ KDP++L +E+ +G Sbjct: 6 IKIMVEGGNVKPGPPLAPTLSQLGLN---VGEVVKKLNEATSSFKGMSVPVTIEVDSNTKKYEIKVGIPTTTALLLKEAGVSEPSGDPAHKKI----GNLSLEQVIKIAIMKKPGLTTKSLKAAVKSMLGTAKSIGVTVENKDPKELVKEVEEG 152
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_NITMS (50S ribosomal protein L11P OS=Nitrosopumilus maritimus (strain SCM1) GN=rpl11p PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 2.081e-15 Identity = 48/146 (32.88%), Postives = 82/146 (56.16%), Query Frame = 1 Query: 67 VTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 495 VTGG A L P +GPLG++ ++ I +T KD++G++V V + V + K + +PSAAAL++K + + + G++T+D V+++A S A L K I+GTC+++G V+GK P+++ EI +G Sbjct: 10 VTGGGASAGPPLGPALGPLGVNIMEVINAINDKT-KDFEGMKVPVTVIVDSDTKKYEIEIGIPSAAALIMK--EAGIQKGSGASGTEWAGDVTMDAVVKVANTKLENSYASSLKSVAKTIVGTCLALGVKVEGKTPKEITAEINEG 152
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_SULIY (50S ribosomal protein L11P OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rpl11p PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 3.550e-15 Identity = 53/154 (34.42%), Postives = 82/154 (53.25%), Query Frame = 1 Query: 55 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAK--ETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIK--ALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 495 + + V GG V LAP + LGL+ +GE + K E +KG+ V V + V + K + +P+ AL++K EP D K GN++L+ VI+IA + +P K L VK +LGT S+G TV+ KDP++L +E+ +G Sbjct: 6 IKIMVEGGNVKPGPPLAPTLSQLGLN---VGEVVKKLNEATSSFKGMSVPVTIEVDSNTKKYEIKVGIPTTTALLLKEAGASEPSGDPAHKKI----GNLSLEQVIKIAIMKKPGLTTKSLKAAVKSMLGTAKSIGVTVENKDPKELVKEVEEG 152
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_SULIL (50S ribosomal protein L11P OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rpl11p PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 3.550e-15 Identity = 53/154 (34.42%), Postives = 82/154 (53.25%), Query Frame = 1 Query: 55 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAK--ETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIK--ALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 495 + + V GG V LAP + LGL+ +GE + K E +KG+ V V + V + K + +P+ AL++K EP D K GN++L+ VI+IA + +P K L VK +LGT S+G TV+ KDP++L +E+ +G Sbjct: 6 IKIMVEGGNVKPGPPLAPTLSQLGLN---VGEVVKKLNEATSSFKGMSVPVTIEVDSNTKKYEIKVGIPTTTALLLKEAGASEPSGDPAHKKI----GNLSLEQVIKIAIMKKPGLTTKSLKAAVKSMLGTAKSIGVTVENKDPKELVKEVEEG 152
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_SULIK (50S ribosomal protein L11P OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rpl11p PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 3.550e-15 Identity = 53/154 (34.42%), Postives = 82/154 (53.25%), Query Frame = 1 Query: 55 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAK--ETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIK--ALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 495 + + V GG V LAP + LGL+ +GE + K E +KG+ V V + V + K + +P+ AL++K EP D K GN++L+ VI+IA + +P K L VK +LGT S+G TV+ KDP++L +E+ +G Sbjct: 6 IKIMVEGGNVKPGPPLAPTLSQLGLN---VGEVVKKLNEATSSFKGMSVPVTIEVDSNTKKYEIKVGIPTTTALLLKEAGASEPSGDPAHKKI----GNLSLEQVIKIAIMKKPGLTTKSLKAAVKSMLGTAKSIGVTVENKDPKELVKEVEEG 152 The following BLAST results are available for this feature:
BLAST of DY271182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271182 ID=DY271182; Name=DY271182; organism=Citrus clementina; type=EST; length=1027bpback to top |