DY271182
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_SULIA (50S ribosomal protein L11P OS=Sulfolobus islandicus (strain M.16.27) GN=rpl11p PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 3.550e-15 Identity = 53/154 (34.42%), Postives = 82/154 (53.25%), Query Frame = 1 Query: 55 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAK--ETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIK--ALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 495 + + V GG V LAP + LGL+ +GE + K E +KG+ V V + V + K + +P+ AL++K EP D K GN++L+ VI+IA + +P K L VK +LGT S+G TV+ KDP++L +E+ +G Sbjct: 6 IKIMVEGGNVKPGPPLAPTLSQLGLN---VGEVVKKLNEATSSFKGMSVPVTIEVDSNTKKYEIKVGIPTTTALLLKEAGASEPSGDPAHKKI----GNLSLEQVIKIAIMKKPGLTTKSLKAAVKSMLGTAKSIGVTVENKDPKELVKEVEEG 152
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_METMA (50S ribosomal protein L11P OS=Methanosarcina mazei GN=rpl11p PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 4.637e-15 Identity = 47/145 (32.41%), Postives = 86/145 (59.31%), Query Frame = 1 Query: 67 VTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQ-AKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 495 V GG+ L P +GPLG++ K++ E I ++T +D+ G++V VK+ V +++ ++ V P A+LV+K L + + GN+T+ V +IA++ + ++ DL T+KE++GTCV +G V+G +D Q+ + +G Sbjct: 9 VPGGKANPGPPLGPALGPLGVNIKEVVEKINEKT-RDYNGMQVPVKVIVDDKKNVEIEVGTPPTASLVMKELGIQKGSGNAGSEVV--GNLTIPQVAKIARMKKEDVLSYDLKATMKEVMGTCVPMGVNVEGMKAKDCQKALDEG 150
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_SULSO (50S ribosomal protein L11P OS=Sulfolobus solfataricus GN=rpl11p PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 7.910e-15 Identity = 52/154 (33.77%), Postives = 82/154 (53.25%), Query Frame = 1 Query: 55 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAK--ETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIK--ALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 495 + + V GG V LAP + LGL+ +GE + K E +KG+ V V + V + K + +P+ AL++K EP D K GN++L+ VI+IA + +P K L +K +LGT S+G TVD +DP++L +E+ +G Sbjct: 6 IKIMVEGGNVKPGPPLAPTLSQLGLN---VGEVVKKLNEATSSFKGMSVPVTIEVDSSTKKYEIKVGIPTTTALLLKEAGASEPSGDPAHKKI----GNLSLEQVIKIAIMKKPGLTTKSLKAALKSMLGTAKSIGLTVDNRDPKELVKEVEEG 152
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_SULAC (50S ribosomal protein L11P OS=Sulfolobus acidocaldarius GN=rpl11p PE=1 SV=3) HSP 1 Score: 81.6481 bits (200), Expect = 7.910e-15 Identity = 50/152 (32.89%), Postives = 85/152 (55.92%), Query Frame = 1 Query: 55 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIKAL--KEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 495 + + V GG L P + LGL+ +++ + I TA+ +KG+ V V + + + K + VP+ +L++KA+ +EP D K GN+ L+ + +IA +P+ AK L+ +K +LGT S+G TV+GKDP+D+ +EI G Sbjct: 6 IKIMVEGGSAKPGPPLGPTLSQLGLNVQEVVKKINDVTAQ-FKGMSVPVTIEIDSSTKKYDIKVGVPTTTSLLLKAINAQEPSGDPAHKKI----GNLDLEQIADIAIKKKPQLSAKTLTAAIKSLLGTARSIGITVEGKDPKDVIKEIDQG 152
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_SULIN (50S ribosomal protein L11P OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rpl11p PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.033e-14 Identity = 52/154 (33.77%), Postives = 81/154 (52.60%), Query Frame = 1 Query: 55 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAK--ETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIK--ALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 495 + + V GG V LAP + LGL+ +GE + K E +KG+ V V + V + K + +P+ AL++K EP D K GN++L+ VI+I + +P K L VK +LGT S+G TV+ KDP++L +E+ +G Sbjct: 6 IKIMVEGGNVKPGPPLAPTLSQLGLN---VGEVVKKLNEATSSFKGMSVPVTIEVDSNTKKYEIKVGIPTTTALLLKEAGASEPSGDPAHKKI----GNLSLEQVIKIVIMKKPGLTTKSLKAAVKSMLGTAKSIGVTVENKDPKELVKEVEEG 152
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_METST (50S ribosomal protein L11P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl11p PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.349e-14 Identity = 48/158 (30.38%), Postives = 88/158 (55.70%), Query Frame = 1 Query: 40 SQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLT--VQNRQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVE 504 SQ +++ V GG+ L P IGPLG++ ++ E+I K+TA D+ G++V VK+T + + ++++ P ALV+ L + + + +++ ++A++ +A D KE++GTCVS+G V GKD R+ Q++I +GD + Sbjct: 3 SQTIEILVE--GGKATPGPPLGPAIGPLGINMMQVVEEINKKTA-DFGGMKVPVKITADMDTKDFEISIGTPPTTALVLDELGIESGSHEPGTEVA--ADFSVEQAFKVARMKFDDLLANDYKHATKEVIGTCVSMGINVQGKDGRETQKDIDNGDYD 155
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_METB6 (50S ribosomal protein L11P OS=Methanoregula boonei (strain 6A8) GN=rpl11p PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.349e-14 Identity = 51/149 (34.23%), Postives = 83/149 (55.70%), Query Frame = 1 Query: 55 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNR-QAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 495 V V V GG+ A L P +GPLG++ K + ++I +TA + G++V VK+ V ++ Q V V +P AL+ K + + N K GN+ + + IAK+ ++ +L KE++GTCVS+G VDGK P+++ +I G Sbjct: 5 VEVLVPGGKATAGPPLGPALGPLGINVKAVVDEINAKTAS-FNGMQVPVKVEVNDKKQFTVTVGIPPTTALIKKEANIEKGSAEP--NAKVAGNLPFEAAVRIAKMKLEGMLSYELKTATKEVVGTCVSMGVNVDGKRPKEVLADIAAG 150
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_METS3 (50S ribosomal protein L11P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rpl11p PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 2.301e-14 Identity = 43/150 (28.67%), Postives = 84/150 (56.00%), Query Frame = 1 Query: 55 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 495 V + + GG L P +GP G++ ++ E+I ++A D+ G++V VK+++ + + P +L+++ L + + +I ++ +D ++IA++ +A D VKE++GTCVS+G +VDGKDPR+ Q+++ G Sbjct: 6 VEILIEGGSATPGPPLGPALGPFGINMMQVVEEINNKSA-DFAGMKVPVKVSIDRDTKEFEIEIGTPPTTSLIMEELGIEKASHEPGADIV--ADLPIDKALKIARMKFDSLLANDYKAGVKEVMGTCVSMGLSVDGKDPREAQKDVDAG 152
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_METBU (50S ribosomal protein L11P OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl11p PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 2.301e-14 Identity = 44/145 (30.34%), Postives = 84/145 (57.93%), Query Frame = 1 Query: 67 VTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQN-RQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 495 + GG+ L P +GPLG++ K + E I ++T KD+ G++V VK+ V + + ++ V P +AL++K L + + + GN+ + V +IA++ + ++ L +KE++GTCV +G T++ DPR+ Q+ + +G Sbjct: 9 IPGGKANPGPPLGPALGPLGVNIKDVIEKINEKT-KDYNGMQVPVKVIVNDDKSVEIEVGTPPTSALILKELNIEKGSGESGTVVV--GNLEIAQVAKIARMKKDDILSYSLKAAIKEVMGTCVPMGVTIENLDPRECQKAVDEG 150
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_METTP (50S ribosomal protein L11P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rpl11p PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 3.006e-14 Identity = 47/149 (31.54%), Postives = 84/149 (56.38%), Query Frame = 1 Query: 67 VTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNR---QAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVE 504 V+GG+ A L P +GPLG++ + I E KD G++V VK+ V++R + +V P++A L+ +A E KK G+I++D VI++A++ R ++ +L V EI+GTC ++G +DG +++Q+ + G + Sbjct: 9 VSGGKATAGPPLGPALGPLGVNVAAVVAKI-NELTKDLNGMQVPVKIIVKSRTEFEIEVGTPPTSALLLKEAGVEKGSGDKKN----FVGDISMDQVIKVAEIKRKNLLSSNLKSAVSEIVGTCGTLGIKIDGLTSKEVQKALASGSYD 152 The following BLAST results are available for this feature:
BLAST of DY271182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271182 ID=DY271182; Name=DY271182; organism=Citrus clementina; type=EST; length=1027bpback to top |