DY271182
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_METAC (50S ribosomal protein L11P OS=Methanosarcina acetivorans GN=rpl11p PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 5.127e-14 Identity = 44/145 (30.34%), Postives = 85/145 (58.62%), Query Frame = 1 Query: 67 VTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQ-AKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 495 V GG+ L P +GPLG++ K++ E I ++T +D+ G++V VK+ V +++ ++ V P A+LV+K L + + GN+T+ V ++A++ + ++ DL +KE++G+CV +G V+G +D Q+ + +G Sbjct: 9 VPGGKANPGPPLGPALGPLGVNIKEVVEKINEKT-RDYNGMQVPVKVIVDDKKNVEIEVGTPPTASLVMKELGIQKGSGNAGSEVV--GNLTISQVAKVARMKKEDVLSYDLKAAMKEVMGSCVPMGVNVEGMKAKDCQKALDEG 150
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_DESK1 (50S ribosomal protein L11P OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rpl11p PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 5.127e-14 Identity = 50/152 (32.89%), Postives = 86/152 (56.58%), Query Frame = 1 Query: 55 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQ--NRQAKVAV-VPSAAALVIK--ALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 495 + V V GG+ L P + P ++ ++ + I + KD++GL V V++T+ ++ +V V +P+ AL++K K+P D K GNI+ + V+++A + R AK L VK +LGT S+G TVDGKDP+++Q+ + +G Sbjct: 6 IRVMVEGGKATPGPPLGPTLSPYKVNIPQVVKAI-NDATKDFEGLSVPVEITIDIDTKEFEVRVGIPTTTALLMKEAGAKQPTGDPAHQKI----GNISFEQVVKVAILKRDSLTAKTLRAAVKTVLGTARSIGITVDGKDPKEVQKLVDEG 152
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: YD417_YEAST (Putative uncharacterized protein YDR417C OS=Saccharomyces cerevisiae GN=YDR417C PE=5 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.137e-13 Identity = 38/70 (54.29%), Postives = 47/70 (67.14%), Query Frame = -3 Query: 9 FWTVSLTVTRKPFQSLAVSLAMSSPIFFGERPRGPIFGARELAAPTSPPVTRTYTSTTWLGSNFGGMIAL 218 FW + TVT P SL V+LA+SSP FFG++P GPIFGA+ APTSPP Y T GSNFGG++ + Sbjct: 39 FWIFNWTVTLIPLNSL-VALAISSPTFFGDKPNGPIFGAKAAEAPTSPPTALKYKYLTSFGSNFGGILTI 107
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_SULTO (50S ribosomal protein L11P OS=Sulfolobus tokodaii GN=rpl11p PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 3.323e-13 Identity = 51/154 (33.12%), Postives = 80/154 (51.95%), Query Frame = 1 Query: 55 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAK--ETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIKALK--EPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 495 + + V GG V LAP + LGL+ +GE + K + +KG+ V V L V K + +P+ +L++K EP D K G+I +D+I++A + +P+ AK L VK ILGT S+G TVD K P++L + + +G Sbjct: 6 IKIVVEGGNVKPGPPLAPTLSQLGLN---VGEVVKKINDATSQFKGMSVPVTLEVDTDTKKYEIKVGIPTTTSLLLKFANASEPSGDPAHKKV----GDIKFEDIIQVAIMKKPQITAKTLKAAVKSILGTAHSIGLTVDKKSPKELVKAVDEG 152
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_NANEQ (50S ribosomal protein L11P OS=Nanoarchaeum equitans GN=rpl11p PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.649e-12 Identity = 44/152 (28.95%), Postives = 84/152 (55.26%), Query Frame = 1 Query: 49 VDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTV--QNRQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 495 + + + VTGG+ + P + P ++P K+ +I K T K+++GL V V++ + + ++ K+ V +P +AL++KA ++ + GN+++ DV+EIAK L VK +LGT + G V+ KDP+++ +E+ +G Sbjct: 4 IAIRLLVTGGKATPGPPIGPALSPFKINPGKVVAEINKLT-KEYEGLPVPVEIIINPETKEYKIIVGLPPTSALLMKAAGVTRGPQRTVH--EWVGNVSMKDVVEIAKKKIDSMPTSSLKAAVKSVLGTARATGIKVENKDPKEVTKEVDEG 152
BLAST of DY271182 vs. ExPASy Swiss-Prot
Match: RL11_HALMA (50S ribosomal protein L11P OS=Haloarcula marismortui GN=rpl11p PE=1 SV=3) HSP 1 Score: 68.9366 bits (167), Expect = 5.305e-11 Identity = 43/152 (28.29%), Postives = 81/152 (53.29%), Query Frame = 1 Query: 55 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAK-DWKGLRVTVKLTVQNR-QAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVE 504 + V V GGE L P++GP + + + ++I +TA D + VTVK + +V V P+A + +A E + + ++++D V +IA+ P ++ DL+ KE++GTC S+G T++G++PR+ ++ I G+ + Sbjct: 5 IEVLVPGGEANPGPPLGPELGPTPVDVQAVVQEINDQTAAFDGTEVPVTVKYDDDGSFEIEVGVPPTAELIKDEAGFETGSGEPQEDFV---ADLSVDQVKQIAEQKHPDLLSYDLTNAAKEVVGTCTSLGVTIEGENPREFKERIDAGEYD 153 The following BLAST results are available for this feature:
BLAST of DY271182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271182 ID=DY271182; Name=DY271182; organism=Citrus clementina; type=EST; length=1027bpback to top |