DY271186
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271186 vs. ExPASy Swiss-Prot
Match: GARL_ESCF3 (5-keto-4-deoxy-D-glucarate aldolase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=garL PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 6.880e-24 Identity = 59/177 (33.33%), Postives = 100/177 (56.50%), Query Frame = 3 Query: 312 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDXGYLSNYEEELLIMCQVESQEGVQRAEDIAPVDGVDGVQMGPLDLIASMGY 842 K L +++ G + +P E+ GLAG+D++V+D EH P ++ + L AL + + ++R+P + P K+ LD+G + P +++ E A AV+ R+PP G+RG RA+ +G Y + + I+ Q+ESQ GV + IA +GVDG+ +GP DL A++G+ Sbjct: 11 KAALAAHQVQIGCWSALANPISTEVLGLAGFDWLVLDGEHAPNDVTTLIPQLMALKGSISAPVVRVPTNEPVIIKRMLDIGFYNFLIPFVETKEQAINAVAATRYPPEGIRG-VSVSHRANMFGTVPDYFVQSNKNITILVQIESQLGVDNVDAIAATEGVDGIFVGPSDLAAALGH 186
BLAST of DY271186 vs. ExPASy Swiss-Prot
Match: BPHF_RHOSR (4-hydroxy-2-oxovalerate aldolase OS=Rhodococcus sp. (strain RHA1) GN=bphF PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 6.880e-24 Identity = 65/180 (36.11%), Postives = 97/180 (53.89%), Query Frame = 3 Query: 306 SLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAA-TGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDXGYLSNYEEELLIMCQVESQEGVQRAEDIAPVDGVDGVQMGPLDLIASMGY 842 S K L T G +L AE+ AG+D++++D EH P + LA L + A A +R+P + T K+ LDLG Q ++ PM+D+ + A V CR+PP G+RG RAS +G YL +E++ ++ Q E+ + E IA VDG+DGV +G DL AS+G+ Sbjct: 7 SFKKALAEGRTQIGFWLALGDAYSAEVCAGAGFDWLLIDGEHAPQDLRSVLAQLQVIGAYRDCHAAVRVPSADTTVIKQYLDLGAQSLLVPMVDTADEAAAVVRACRYPPGGIRGVGG--ARASRWGRYPRYLHEADEQVCVVVQAETALALSNLEAIAEVDGIDGVFIGTADLAASLGF 184
BLAST of DY271186 vs. ExPASy Swiss-Prot
Match: HPCH_SALSV (4-hydroxy-2-oxo-heptane-1,7-dioate aldolase OS=Salmonella schwarzengrund (strain CVM19633) GN=hpcH PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 1.174e-23 Identity = 57/179 (31.84%), Postives = 99/179 (55.31%), Query Frame = 3 Query: 306 SLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDXGYLSNYEEELLIMCQVESQEGVQRAEDIAPVDGVDGVQMGPLDLIASMGY 842 + K L+ GL+L + AE+ +G+D++++D EH P + L L A+A + ++R + P K+ LD+G Q ++ PM+ + + A+ AV+ R+PP+G+RG + RAS + YL + + ++ Q+E++E + I VDG+DGV +GP DL A MG+ Sbjct: 4 AFKDALKVGRPQIGLWLGLANSYSAELLAGSGFDWLLIDGEHAPNNVQTVLTQLQAIAPYPSQPVVRPSWNDPVQIKQLLDVGAQTLLIPMVQNADEARNAVAATRYPPAGIRGVGSALARASRWNRIPDYLHQANDAMCVLVQIETREAMSNLASILDVDGIDGVFIGPADLSADMGF 182 The following BLAST results are available for this feature:
BLAST of DY271186 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 103
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271186 ID=DY271186; Name=DY271186; organism=Citrus clementina; type=EST; length=998bpback to top |