DY271186

Overview
NameDY271186
Unique NameDY271186
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length998
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY271186 vs. ExPASy Swiss-Prot
Match: KDRA_SALSV (2-keto-3-deoxy-L-rhamnonate aldolase OS=Salmonella schwarzengrund (strain CVM19633) GN=yfaU PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.441e-29
Identity = 66/177 (37.29%), Postives = 106/177 (59.89%), Query Frame = 3 
Query:  312 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDXGYLSNYEEELLIMCQVESQEGVQRAEDIAPVDGVDGVQMGPLDLIASMGY 842
            K  L+  +T  GL+L S +  +AEI+  +GYD++++D EH P  + D    L A+A   +  ++R  E      K+ LD+G Q ++ PM+D+ E A++ VS  R+PP G RG   +V RA+ +G    Y++   E L ++ QVES+  ++  + I  V+G+DGV +GP DL AS+GY
Sbjct:   10 KEGLRKGDTQIGLWLSSTTSYMAEIAATSGYDWLLIDGEHAPNTVQDLYHQLQAIAPYASQPVIRPIEGSKALIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPLGQRGVGASVARAARWGRIDNYMAQANESLCLLVQVESKVALENLDAILEVEGIDGVFIGPADLSASLGY 186
[Close]
BLAST of DY271186 vs. ExPASy Swiss-Prot
Match: KDRA_SALPK (2-keto-3-deoxy-L-rhamnonate aldolase OS=Salmonella paratyphi A (strain AKU_12601) GN=yfaU PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.441e-29
Identity = 66/177 (37.29%), Postives = 106/177 (59.89%), Query Frame = 3 
Query:  312 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDXGYLSNYEEELLIMCQVESQEGVQRAEDIAPVDGVDGVQMGPLDLIASMGY 842
            K  L+  +T  GL+L S +  +AEI+  +GYD++++D EH P  + D    L A+A   +  ++R  E      K+ LD+G Q ++ PM+D+ E A++ VS  R+PP G RG   +V RA+ +G    Y++   E L ++ QVES+  ++  + I  V+G+DGV +GP DL AS+GY
Sbjct:   10 KEGLRKGDTQIGLWLSSTTSYMAEIAATSGYDWLLIDGEHAPNTVQDLYHQLQAIAPYASQPVIRPIEGSKALIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPLGQRGVGASVARAARWGRIDNYMAQANESLCLLVQVESKVALENLDAILEVEGIDGVFIGPADLSASLGY 186
[Close]
BLAST of DY271186 vs. ExPASy Swiss-Prot
Match: KDRA_SALPC (2-keto-3-deoxy-L-rhamnonate aldolase OS=Salmonella paratyphi C (strain RKS4594) GN=yfaU PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.441e-29
Identity = 66/177 (37.29%), Postives = 106/177 (59.89%), Query Frame = 3 
Query:  312 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDXGYLSNYEEELLIMCQVESQEGVQRAEDIAPVDGVDGVQMGPLDLIASMGY 842
            K  L+  +T  GL+L S +  +AEI+  +GYD++++D EH P  + D    L A+A   +  ++R  E      K+ LD+G Q ++ PM+D+ E A++ VS  R+PP G RG   +V RA+ +G    Y++   E L ++ QVES+  ++  + I  V+G+DGV +GP DL AS+GY
Sbjct:   10 KEGLRKGDTQIGLWLSSTTSYMAEIAATSGYDWLLIDGEHAPNTVQDLYHQLQAIAPYASQPVIRPIEGSKALIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPLGQRGVGASVARAARWGRIDNYMAQANESLCLLVQVESKVALENLDAILEVEGIDGVFIGPADLSASLGY 186
[Close]
BLAST of DY271186 vs. ExPASy Swiss-Prot
Match: KDRA_SALPB (2-keto-3-deoxy-L-rhamnonate aldolase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=yfaU PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.441e-29
Identity = 66/177 (37.29%), Postives = 106/177 (59.89%), Query Frame = 3 
Query:  312 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDXGYLSNYEEELLIMCQVESQEGVQRAEDIAPVDGVDGVQMGPLDLIASMGY 842
            K  L+  +T  GL+L S +  +AEI+  +GYD++++D EH P  + D    L A+A   +  ++R  E      K+ LD+G Q ++ PM+D+ E A++ VS  R+PP G RG   +V RA+ +G    Y++   E L ++ QVES+  ++  + I  V+G+DGV +GP DL AS+GY
Sbjct:   10 KEGLRKGDTQIGLWLSSTTSYMAEIAATSGYDWLLIDGEHAPNTVQDLYHQLQAIAPYASQPVIRPIEGSKALIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPLGQRGVGASVARAARWGRIDNYMAQANESLCLLVQVESKVALENLDAILEVEGIDGVFIGPADLSASLGY 186
[Close]
BLAST of DY271186 vs. ExPASy Swiss-Prot
Match: KDRA_SALPA (2-keto-3-deoxy-L-rhamnonate aldolase OS=Salmonella paratyphi A GN=yfaU PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.441e-29
Identity = 66/177 (37.29%), Postives = 106/177 (59.89%), Query Frame = 3 
Query:  312 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDXGYLSNYEEELLIMCQVESQEGVQRAEDIAPVDGVDGVQMGPLDLIASMGY 842
            K  L+  +T  GL+L S +  +AEI+  +GYD++++D EH P  + D    L A+A   +  ++R  E      K+ LD+G Q ++ PM+D+ E A++ VS  R+PP G RG   +V RA+ +G    Y++   E L ++ QVES+  ++  + I  V+G+DGV +GP DL AS+GY
Sbjct:   10 KEGLRKGDTQIGLWLSSTTSYMAEIAATSGYDWLLIDGEHAPNTVQDLYHQLQAIAPYASQPVIRPIEGSKALIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPLGQRGVGASVARAARWGRIDNYMAQANESLCLLVQVESKVALENLDAILEVEGIDGVFIGPADLSASLGY 186
[Close]
BLAST of DY271186 vs. ExPASy Swiss-Prot
Match: KDRA_SALNS (2-keto-3-deoxy-L-rhamnonate aldolase OS=Salmonella newport (strain SL254) GN=yfaU PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.441e-29
Identity = 66/177 (37.29%), Postives = 106/177 (59.89%), Query Frame = 3 
Query:  312 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDXGYLSNYEEELLIMCQVESQEGVQRAEDIAPVDGVDGVQMGPLDLIASMGY 842
            K  L+  +T  GL+L S +  +AEI+  +GYD++++D EH P  + D    L A+A   +  ++R  E      K+ LD+G Q ++ PM+D+ E A++ VS  R+PP G RG   +V RA+ +G    Y++   E L ++ QVES+  ++  + I  V+G+DGV +GP DL AS+GY
Sbjct:   10 KEGLRKGDTQIGLWLSSTTSYMAEIAATSGYDWLLIDGEHAPNTVQDLYHQLQAIAPYASQPVIRPIEGSKALIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPLGQRGVGASVARAARWGRIDNYMAQANESLCLLVQVESKVALENLDAILEVEGIDGVFIGPADLSASLGY 186
[Close]
BLAST of DY271186 vs. ExPASy Swiss-Prot
Match: KDRA_SALHS (2-keto-3-deoxy-L-rhamnonate aldolase OS=Salmonella heidelberg (strain SL476) GN=yfaU PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.441e-29
Identity = 66/177 (37.29%), Postives = 106/177 (59.89%), Query Frame = 3 
Query:  312 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDXGYLSNYEEELLIMCQVESQEGVQRAEDIAPVDGVDGVQMGPLDLIASMGY 842
            K  L+  +T  GL+L S +  +AEI+  +GYD++++D EH P  + D    L A+A   +  ++R  E      K+ LD+G Q ++ PM+D+ E A++ VS  R+PP G RG   +V RA+ +G    Y++   E L ++ QVES+  ++  + I  V+G+DGV +GP DL AS+GY
Sbjct:   10 KEGLRKGDTQIGLWLSSTTSYMAEIAATSGYDWLLIDGEHAPNTVQDLYHQLQAIAPYASQPVIRPIEGSKALIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPLGQRGVGASVARAARWGRIDNYMAQANESLCLLVQVESKVALENLDAILEVEGIDGVFIGPADLSASLGY 186
[Close]
BLAST of DY271186 vs. ExPASy Swiss-Prot
Match: KDRA_SALEP (2-keto-3-deoxy-L-rhamnonate aldolase OS=Salmonella enteritidis PT4 (strain P125109) GN=yfaU PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.441e-29
Identity = 66/177 (37.29%), Postives = 106/177 (59.89%), Query Frame = 3 
Query:  312 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDXGYLSNYEEELLIMCQVESQEGVQRAEDIAPVDGVDGVQMGPLDLIASMGY 842
            K  L+  +T  GL+L S +  +AEI+  +GYD++++D EH P  + D    L A+A   +  ++R  E      K+ LD+G Q ++ PM+D+ E A++ VS  R+PP G RG   +V RA+ +G    Y++   E L ++ QVES+  ++  + I  V+G+DGV +GP DL AS+GY
Sbjct:   10 KEGLRKGDTQIGLWLSSTTSYMAEIAATSGYDWLLIDGEHAPNTVQDLYHQLQAIAPYASQPVIRPIEGSKALIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPLGQRGVGASVARAARWGRIDNYMAQANESLCLLVQVESKVALENLDAILEVEGIDGVFIGPADLSASLGY 186
[Close]
BLAST of DY271186 vs. ExPASy Swiss-Prot
Match: KDRA_SALDC (2-keto-3-deoxy-L-rhamnonate aldolase OS=Salmonella dublin (strain CT_02021853) GN=yfaU PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.441e-29
Identity = 66/177 (37.29%), Postives = 106/177 (59.89%), Query Frame = 3 
Query:  312 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDXGYLSNYEEELLIMCQVESQEGVQRAEDIAPVDGVDGVQMGPLDLIASMGY 842
            K  L+  +T  GL+L S +  +AEI+  +GYD++++D EH P  + D    L A+A   +  ++R  E      K+ LD+G Q ++ PM+D+ E A++ VS  R+PP G RG   +V RA+ +G    Y++   E L ++ QVES+  ++  + I  V+G+DGV +GP DL AS+GY
Sbjct:   10 KEGLRKGDTQIGLWLSSTTSYMAEIAATSGYDWLLIDGEHAPNTVQDLYHQLQAIAPYASQPVIRPIEGSKALIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPLGQRGVGASVARAARWGRIDNYMAQANESLCLLVQVESKVALENLDAILEVEGIDGVFIGPADLSASLGY 186
[Close]
BLAST of DY271186 vs. ExPASy Swiss-Prot
Match: KDRA_SALCH (2-keto-3-deoxy-L-rhamnonate aldolase OS=Salmonella choleraesuis GN=yfaU PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.441e-29
Identity = 66/177 (37.29%), Postives = 106/177 (59.89%), Query Frame = 3 
Query:  312 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDXGYLSNYEEELLIMCQVESQEGVQRAEDIAPVDGVDGVQMGPLDLIASMGY 842
            K  L+  +T  GL+L S +  +AEI+  +GYD++++D EH P  + D    L A+A   +  ++R  E      K+ LD+G Q ++ PM+D+ E A++ VS  R+PP G RG   +V RA+ +G    Y++   E L ++ QVES+  ++  + I  V+G+DGV +GP DL AS+GY
Sbjct:   10 KEGLRKGDTQIGLWLSSTTSYMAEIAATSGYDWLLIDGEHAPNTVQDLYHQLQAIAPYASQPVIRPIEGSKALIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPLGQRGVGASVARAARWGRIDNYMAQANESLCLLVQVESKVALENLDAILEVEGIDGVFIGPADLSASLGY 186
The following BLAST results are available for this feature:
BLAST of DY271186 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 103
Match NameE-valueIdentityDescription
KDRA_SALSV2.441e-2937.292-keto-3-deoxy-L-rhamnonate aldolase OS=Salmonella... [more]
KDRA_SALPK2.441e-2937.292-keto-3-deoxy-L-rhamnonate aldolase OS=Salmonella... [more]
KDRA_SALPC2.441e-2937.292-keto-3-deoxy-L-rhamnonate aldolase OS=Salmonella... [more]
KDRA_SALPB2.441e-2937.292-keto-3-deoxy-L-rhamnonate aldolase OS=Salmonella... [more]
KDRA_SALPA2.441e-2937.292-keto-3-deoxy-L-rhamnonate aldolase OS=Salmonella... [more]
KDRA_SALNS2.441e-2937.292-keto-3-deoxy-L-rhamnonate aldolase OS=Salmonella... [more]
KDRA_SALHS2.441e-2937.292-keto-3-deoxy-L-rhamnonate aldolase OS=Salmonella... [more]
KDRA_SALEP2.441e-2937.292-keto-3-deoxy-L-rhamnonate aldolase OS=Salmonella... [more]
KDRA_SALDC2.441e-2937.292-keto-3-deoxy-L-rhamnonate aldolase OS=Salmonella... [more]
KDRA_SALCH2.441e-2937.292-keto-3-deoxy-L-rhamnonate aldolase OS=Salmonella... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YC04FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271186 ID=DY271186; Name=DY271186; organism=Citrus clementina; type=EST; length=998bp
TCACTATCAGATAGCCCACCGCCTTCACACTTGACGAAGACGAACTGAGC
GGAACTGAAACTGAGACAATTACAAAAGCAACCATGACCACGCTCACTTG
CTCGGGCTCCGGCACTGCCGCCACTGTCGCCAAGCTTGCACAAAATAAAA
TCAGTTCATTTCCAAAAGCACCCTTGTTCACCCTCAACGGCAACAAATCG
AAAATCGTTTTCCCAAAACTGAAATTGACCCCCTCAGTCTCACGCTCACC
CTCGGATCTGTCGCCAGGCGATCCCCTTTCCCCATCTCCATCACCCTCGC
CCGAATCACTCAAGTATCGCCTCCAAAGCAACGAAACCCTGTACGGACTC
TTCCTCCTCTCTTTCTCCCCAACTCTTGCCGAAATTTCGGGCCTGGCCGG
TTACGATTTCGTCGTCGTAGACATGGAGCACGGCCCTGGCGGCATTTCCG
ATGCTCTCGCTTGCCTTCACGCTCTTGCCGCCACGGGGACGCCGGCCATT
CTGCGGCTCCCTGAAAGTTGCCCAACTTGGGCTAAAAAGGCCCTCGATCT
GGGCCCACAAGGGGTCATGTTCCCTATGATTGACTCCCCAGAAGCCGCCA
AGGAAGCGGTGTCGTATTGCCGGTTCCCGCCTTCTGGAGTGCGGGGATCC
GCTCACACGGTGGTGAGAGCGTCCGGTTACGGGATTGATGANGGATACTT
GAGTAATTACGAGGAGGAGTTGTTGATTATGTGCCAAGTGGAGAGCCAGG
AAGGCGTCCAGCGAGCCGAAGACATCGCGCCGGTTGATGGGGTTGACGGC
GTGCAAATGGGACCGTTGGATTTGATTGCCAGTATGGGGTACTGGGGGAC
CCCGGGCCCAGGAAGGTGAAGGAAAAGATGAGGGTGGCCGAAAAAGGGGT
TTTGGGCGGTGGCAAGGCTAACTTGGGTGGGTTTGCCTAGCCCCTTGAGG
GACCCCCTTGAAAAGAAATCCCGGGGGAACCCCCAGGGGGGCCGGGGG
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