DY271186
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271186 vs. ExPASy Swiss-Prot
Match: HPCH_SHIFL (4-hydroxy-2-oxo-heptane-1,7-dioate aldolase OS=Shigella flexneri GN=hpcH PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 4.765e-25 Identity = 60/179 (33.52%), Postives = 101/179 (56.42%), Query Frame = 3 Query: 306 SLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDXGYLSNYEEELLIMCQVESQEGVQRAEDIAPVDGVDGVQMGPLDLIASMGY 842 S K L++ GL+L S AE+ G+D++++D EH P + L L A+A + ++R + P K+ LD+G Q ++ PM+ + + A++AV R+PP+G+RG + RAS + YL +++ ++ Q+E++E ++ I V+GVDGV +GP DL A MGY Sbjct: 4 SFKAALKAGRPQIGLWLGLSSSYSAELLAGPGFDWLLIDGEHAPNNVQTVLTQLQAIAPYPSQPVVRPSWNDPVQIKQLLDVGTQTLLVPMVQNADEARKAVRATRYPPAGIRGVGSALARASRWNRIPDYLQKANDQMCVLVQIETREAMKNLPQILDVEGVDGVFIGPADLSADMGY 182
BLAST of DY271186 vs. ExPASy Swiss-Prot
Match: HPCH_SALDC (4-hydroxy-2-oxo-heptane-1,7-dioate aldolase OS=Salmonella dublin (strain CT_02021853) GN=hpcH PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.386e-24 Identity = 58/179 (32.40%), Postives = 101/179 (56.42%), Query Frame = 3 Query: 306 SLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDXGYLSNYEEELLIMCQVESQEGVQRAEDIAPVDGVDGVQMGPLDLIASMGY 842 + K L++ GL+L + AE+ AG+D++++D EH P + L L A+A+ + ++R + P K+ LD+G Q ++ PM+ + + A+ AV+ R+PP+G+RG + RAS + YL + + ++ Q+E++E + I VDG+DGV +GP DL A MG+ Sbjct: 4 AFKDALKAGRPQIGLWLGLANSYSAELLAGAGFDWLLIDGEHAPNNVQTVLTQLQAIASYPSQPVVRPSWNDPVQIKQLLDVGAQTLLIPMVQNADEARNAVAATRYPPAGIRGVGSALARASRWNRIPDYLHQANDAMCVLVQIETREAMSNLASILDVDGIDGVFIGPADLSADMGF 182
BLAST of DY271186 vs. ExPASy Swiss-Prot
Match: HPCH_SALHS (4-hydroxy-2-oxo-heptane-1,7-dioate aldolase OS=Salmonella heidelberg (strain SL476) GN=hpcH PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.811e-24 Identity = 58/179 (32.40%), Postives = 100/179 (55.87%), Query Frame = 3 Query: 306 SLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDXGYLSNYEEELLIMCQVESQEGVQRAEDIAPVDGVDGVQMGPLDLIASMGY 842 + K L++ GL+L + AE+ AG+D++++D EH P + L L A+A + ++R + P K+ LD+G Q ++ PM+ + + A+ AV+ R+PP+G+RG + RAS + YL + + ++ Q+E++E + I VDG+DGV +GP DL A MG+ Sbjct: 4 AFKDALKAGRPQIGLWLGLANSYSAELLAGAGFDWLLIDGEHAPNNVQTVLTQLQAIAPYPSQPVVRPSWNDPVQIKQLLDVGAQTLLIPMVQNADEARNAVAATRYPPAGIRGVGSALARASRWNRIPNYLHQANDAMCVLVQIETREAMSNLASILDVDGIDGVFIGPADLSADMGF 182
BLAST of DY271186 vs. ExPASy Swiss-Prot
Match: HPCH_SALAR (4-hydroxy-2-oxo-heptane-1,7-dioate aldolase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=hpcH PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.811e-24 Identity = 58/179 (32.40%), Postives = 101/179 (56.42%), Query Frame = 3 Query: 306 SLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDXGYLSNYEEELLIMCQVESQEGVQRAEDIAPVDGVDGVQMGPLDLIASMGY 842 + K L++ GL+L + AE+ AG+D++++D EH P + L L A+A + ++R + P K+ LD+G Q ++ PM+ + + A++AV+ R+PP+G+RG + RAS + YL + + ++ Q+E++E + I VDG+DGV +GP DL A MG+ Sbjct: 4 AFKDALKAGRPQIGLWLGLANSYSAELVAGAGFDWLLIDGEHAPNNVQTVLTQLQAIAPYPSQPVVRPSWNDPVQIKQLLDVGAQTLLVPMVQNADEARDAVAATRYPPAGIRGVGSALARASRWNRIPDYLHEANDAMCVLVQIETREAMSNLASILDVDGIDGVFIGPADLSADMGF 182
BLAST of DY271186 vs. ExPASy Swiss-Prot
Match: GARL_SALG2 (5-keto-4-deoxy-D-glucarate aldolase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=garL PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.811e-24 Identity = 59/177 (33.33%), Postives = 99/177 (55.93%), Query Frame = 3 Query: 312 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDXGYLSNYEEELLIMCQVESQEGVQRAEDIAPVDGVDGVQMGPLDLIASMGY 842 K L + + G + SP E+ GLAG+D++V+D EH P ++ + L AL + + ++R+P + P K+ LD+G + P +++ E A AV+ R+PP G+RG RA+ +G Y + + + I+ Q+ESQ GV + IA +GVDG+ +GP DL A++ + Sbjct: 11 KAALAAQQVQIGCWSALASPITTEVLGLAGFDWLVLDGEHAPNDVTTLIPQLMALKGSASAPVVRVPTNEPVIIKRMLDIGFYNFLIPFVETQEEAARAVASTRYPPEGIRG-VSVSHRANMFGTVPDYFAQSNKNITIIVQIESQLGVDNVDAIAATEGVDGIFVGPSDLAAALSH 186
BLAST of DY271186 vs. ExPASy Swiss-Prot
Match: HPCH_SALTI (4-hydroxy-2-oxo-heptane-1,7-dioate aldolase OS=Salmonella typhi GN=hpcH PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 2.365e-24 Identity = 58/179 (32.40%), Postives = 100/179 (55.87%), Query Frame = 3 Query: 306 SLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDXGYLSNYEEELLIMCQVESQEGVQRAEDIAPVDGVDGVQMGPLDLIASMGY 842 + K L++ GL+L + AE+ AG+D++++D EH P + L L A+A + ++R + P K+ LD+G Q ++ PM+ + + A+ AV+ R+PP+G+RG + RAS + YL + + ++ Q+E++E + I VDG+DGV +GP DL A MG+ Sbjct: 4 AFKDALKAGRPQIGLWLGLANSYSAELLAGAGFDWLLIDGEHAPNNVQTVLTQLQAIAPYPSQPVVRPSWNDPVQIKQLLDVGAQTLLIPMVQNADEARNAVAATRYPPAGIRGVGSALARASRWNRIPDYLHQANDAMCVLVQIETREAMSNLASILDVDGIDGVFIGPADLSADMGF 182
BLAST of DY271186 vs. ExPASy Swiss-Prot
Match: HPCH_SALPC (4-hydroxy-2-oxo-heptane-1,7-dioate aldolase OS=Salmonella paratyphi C (strain RKS4594) GN=hpcH PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 2.365e-24 Identity = 58/179 (32.40%), Postives = 100/179 (55.87%), Query Frame = 3 Query: 306 SLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDXGYLSNYEEELLIMCQVESQEGVQRAEDIAPVDGVDGVQMGPLDLIASMGY 842 + K L++ GL+L + AE+ AG+D++++D EH P + L L A+A + ++R + P K+ LD+G Q ++ PM+ + + A+ AV+ R+PP+G+RG + RAS + YL + + ++ Q+E++E + I VDG+DGV +GP DL A MG+ Sbjct: 4 AFKDTLKAGRPQIGLWLGLANSYSAELLAGAGFDWLLIDGEHAPNNVQTVLTQLQAIAPYPSQPVVRPSWNDPVQIKQLLDVGAQTLLIPMVQNADEARNAVAATRYPPAGIRGVGSALARASRWNRIPDYLHQANDAMCVLVQIETREAMSNLASILDVDGIDGVFIGPADLSADMGF 182
BLAST of DY271186 vs. ExPASy Swiss-Prot
Match: HPCH_SALPB (4-hydroxy-2-oxo-heptane-1,7-dioate aldolase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=hpcH PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 2.365e-24 Identity = 58/179 (32.40%), Postives = 100/179 (55.87%), Query Frame = 3 Query: 306 SLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDXGYLSNYEEELLIMCQVESQEGVQRAEDIAPVDGVDGVQMGPLDLIASMGY 842 + K L++ GL+L + AE+ AG+D++++D EH P + L L A+A + ++R + P K+ LD+G Q ++ PM+ + + A+ AV+ R+PP+G+RG + RAS + YL + + ++ Q+E++E + I VDG+DGV +GP DL A MG+ Sbjct: 4 AFKDALKAGRPQIGLWLGLANSYSAELLAGAGFDWLLIDGEHAPNNVQTVLTQLQAIAPYPSQPVVRPSWNDPVQIKQLLDVGAQTLLIPMVQNADEARNAVAATRYPPAGIRGVGSALARASRWNRIPDYLHQANDAMCVLVQIETREAMSNLASILDVDGIDGVFIGPADLSADMGF 182
BLAST of DY271186 vs. ExPASy Swiss-Prot
Match: HPCH_SALNS (4-hydroxy-2-oxo-heptane-1,7-dioate aldolase OS=Salmonella newport (strain SL254) GN=hpcH PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 2.365e-24 Identity = 58/179 (32.40%), Postives = 100/179 (55.87%), Query Frame = 3 Query: 306 SLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDXGYLSNYEEELLIMCQVESQEGVQRAEDIAPVDGVDGVQMGPLDLIASMGY 842 + K L++ GL+L + AE+ AG+D++++D EH P + L L A+A + ++R + P K+ LD+G Q ++ PM+ + + A+ AV+ R+PP+G+RG + RAS + YL + + ++ Q+E++E + I VDG+DGV +GP DL A MG+ Sbjct: 4 AFKDALKAGRPQIGLWLGLANSYSAELLAGAGFDWLLIDGEHAPNNVQTVLTQLQAIAPYPSQPVVRPSWNDPVQIKQLLDVGAQTLLIPMVQNADEARNAVAATRYPPAGIRGVGSALARASRWNRIPDYLHQANDAMCVLVQIETREAMSNLASILDVDGIDGVFIGPADLSADMGF 182
BLAST of DY271186 vs. ExPASy Swiss-Prot
Match: HPCH_SALG2 (4-hydroxy-2-oxo-heptane-1,7-dioate aldolase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=hpcH PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 2.365e-24 Identity = 58/179 (32.40%), Postives = 100/179 (55.87%), Query Frame = 3 Query: 306 SLKYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDXGYLSNYEEELLIMCQVESQEGVQRAEDIAPVDGVDGVQMGPLDLIASMGY 842 + K L++ GL+L + AE+ AG+D++++D EH P + L L A+A + ++R + P K+ LD+G Q ++ PM+ + + A+ AV+ R+PP+G+RG + RAS + YL + + ++ Q+E++E + I VDG+DGV +GP DL A MG+ Sbjct: 4 AFKDALKAGRPQIGLWLGLANSYSAELLAGAGFDWLLIDGEHAPNNVQTVLTQLQAIAPYPSQPVVRPSWNDPVQIKQLLDVGAQTLLIPMVQNADEARNAVAATRYPPAGIRGVGSALARASRWNRIPDYLHQANDAMCVLVQIETREAMSNLASILDVDGIDGVFIGPADLSADMGF 182 The following BLAST results are available for this feature:
BLAST of DY271186 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 103
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271186 ID=DY271186; Name=DY271186; organism=Citrus clementina; type=EST; length=998bpback to top |