DY271187
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271187 vs. ExPASy Swiss-Prot
Match: SPT4_YEAST (Transcription elongation factor SPT4 OS=Saccharomyces cerevisiae GN=SPT4 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.389e-12 Identity = 30/86 (34.88%), Postives = 50/86 (58.14%), Query Frame = 2 Query: 263 RACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNL 520 RAC+ C +V+T ++F GC NC +E ++CT+P+F G++ + PT+SW A+WL + + G Y + V LP ++ L Sbjct: 5 RACMLCGIVQTTNEFNRDGCPNCQGI-FEEAGVSTMECTSPSFEGLVGMCKPTKSWVAKWLSVDHSIAGMYAIKVDGRLPAEVVEL 89
BLAST of DY271187 vs. ExPASy Swiss-Prot
Match: SPT4_CANAL (Transcription elongation factor SPT4 OS=Candida albicans GN=SPT4 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.094e-12 Identity = 35/99 (35.35%), Postives = 56/99 (56.57%), Query Frame = 2 Query: 263 RACLRCRLVKTYDQFRESGCENCP--FFKMDEDHERVVDCTTPNFNGIISVMDPTR-SWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 550 RAC+ C +++ F + GC NC D+++V DCT+P+F G++++ + + SW ARWLRI F G Y + V+ LP + E++ V Y P Sbjct: 7 RACMLCGIIQPMKSFIDYGCPNCESLLHYQYNDNKQVQDCTSPSFEGLVALGEDNKGSWVARWLRIDSFTAGLYAVKVNGKLPPSIIAELEEQNVIYRP 105
BLAST of DY271187 vs. ExPASy Swiss-Prot
Match: SPT4_DEBHA (Transcription elongation factor SPT4 OS=Debaryomyces hansenii GN=SPT4 PE=3 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.619e-11 Identity = 33/98 (33.67%), Postives = 56/98 (57.14%), Query Frame = 2 Query: 263 RACLRCRLVKTYDQFRESGCENCPFFKMDEDHE--RVVDCTTPNFNGIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 550 RAC+ C +++ + +F + GC NC +D+E +V DCT+P+F G++++ D T+S LRI FV G Y + ++ LP + D+ + Y P Sbjct: 7 RACMLCGIIQPFRKFVDFGCPNCESVLHFQDNEDNQVQDCTSPSFEGLVALGDETKSPGGERLRIDSFVAGLYAVKINGKLPPHIIGDLADQNISYRP 104
BLAST of DY271187 vs. ExPASy Swiss-Prot
Match: SPT4_SCHPO (Transcription elongation factor spt4 OS=Schizosaccharomyces pombe GN=spt4 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.953e-11 Identity = 36/96 (37.50%), Postives = 46/96 (47.92%), Query Frame = 2 Query: 263 RACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 550 RACL C +V + F GC N + + V T+P F GI+++M PT SW ARW RI F PG Y V L ED+ + Y P Sbjct: 10 RACLICGIVLPHSVFANKGCPN-------DGVDDVETFTSPVFEGIMAMMSPTESWVARWQRIDTFTPGIYATRVQGVLNEDVVESLRRRGINYRP 98 The following BLAST results are available for this feature:
BLAST of DY271187 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY271187 ID=DY271187; Name=DY271187; organism=Citrus clementina; type=EST; length=769bpback to top |