DY271194

Overview
NameDY271194
Unique NameDY271194
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length911
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271194 vs. ExPASy Swiss-Prot
Match: HS17A_ARATH (17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana GN=HSP17.6A PE=1 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.191e-50
Identity = 104/166 (62.65%), Postives = 122/166 (73.49%), Query Frame = 2
Query:   71 MSLIPSFFGNRR---SSVFDPFSLDVWDPFRDFPLPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVE-EARKANAKAIEISG 556
            MSLIPSFFGN R   +++FDPFSLDVWDPF++   PS  SSA++           NARVDWKET EAHVFKADLPG+              L+ISG+R +E+E+K DTWHR ERSSG FSR+FRLPENVKMDQ+KASMENGVLTVTVPKVE   +KA  K+I+ISG
Sbjct:    1 MSLIPSFFGNNRRINNNIFDPFSLDVWDPFKELQFPSSSSSAIA-----------NARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGGFSRKFRLPENVKMDQVKASMENGVLTVTVPKVETNKKKAQVKSIDISG 155          
BLAST of DY271194 vs. ExPASy Swiss-Prot
Match: HSP12_DAUCA (18.0 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 8.327e-50
Identity = 99/162 (61.11%), Postives = 120/162 (74.07%), Query Frame = 2
Query:   71 MSLIPSFFGNRRSSVFDPFSLDVWDPFRDFPLPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEISG 556
            MS+IPSFFG+RRS+V +PFSLD+WDPF+D+PL +  SS  SS+F  ET+A  N  +DWKETP+AHVFKADLPGL              LQISG+R  E+E+KN+ WHR E SSG F RRFRLPEN  +D++KA MENGVLTVTVPKV E +K   K+I ISG
Sbjct:    1 MSIIPSFFGSRRSNVLNPFSLDIWDPFQDYPLIT--SSGTSSEFGKETAAFANTHIDWKETPQAHVFKADLPGLKKEEVKVEVEEGKVLQISGERNKEKEEKNNKWHRVEFSSGKFLRRFRLPENANVDEVKAGMENGVLTVTVPKV-EMKKPEVKSIHISG 159          
BLAST of DY271194 vs. ExPASy Swiss-Prot
Match: HSP12_SOLPE (17.6 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.420e-49
Identity = 105/163 (64.42%), Postives = 120/163 (73.62%), Query Frame = 2
Query:   71 MSLIPSFFGNRRS-SVFDPFSLDVWDPFRDFPLPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEISG 556
            MSLIP  FG+RRS SVFDPFS+DV+DPF++     G++ + S     ETSA  N R+DWKETPEAHVFKADLPGL              LQISG+R +E+EDKNDTWHR ERSSG F RRFRLPEN KMDQ+KASMENGVLTVTVPK EE    + K+IEISG
Sbjct:    1 MSLIPRIFGDRRSTSVFDPFSIDVFDPFKEL----GFTVSNSG----ETSAFANTRIDWKETPEAHVFKADLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPK-EEVNNPDVKSIEISG 154          
BLAST of DY271194 vs. ExPASy Swiss-Prot
Match: HSP11_SOLLC (17.8 kDa class I heat shock protein OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.855e-49
Identity = 103/163 (63.19%), Postives = 116/163 (71.17%), Query Frame = 2
Query:   71 MSLIPSFFGNRRSS-VFDPFSLDVWDPFRDFPLPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEISG 556
            MSLIP  FG+RRSS +FDPFS+DV+DPFR+   PS  S         E+SA  N R+DWKETPE HVFK DLPGL              LQISG+R +E+EDKND WHR ERSSG F RRFRLPEN KMDQ+KASMENGVLTVTVPK EE +K   K+IEISG
Sbjct:    1 MSLIPRIFGDRRSSSMFDPFSIDVFDPFRELGFPSTNSG--------ESSAFANTRIDWKETPEPHVFKVDLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDKWHRMERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPK-EEVKKPEVKSIEISG 154          
BLAST of DY271194 vs. ExPASy Swiss-Prot
Match: HSP11_SOLPE (17.7 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 4.133e-49
Identity = 104/163 (63.80%), Postives = 117/163 (71.78%), Query Frame = 2
Query:   71 MSLIPSFFGNRRSS-VFDPFSLDVWDPFRDFPLPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEISG 556
            MSLIP  FG+RRSS +FDPFS+DV+DPFR+   P   S         ETSA  N R+DWKETPEAHVFKADLPGL              LQISG+R +E+EDKND W R ERSSG F RRFRLPEN KMDQ+KASMENGVLTVTVPK EE +K + K+IEISG
Sbjct:    1 MSLIPRIFGDRRSSSMFDPFSIDVFDPFRELGFPGTNSG--------ETSAFANTRIDWKETPEAHVFKADLPGLKLEEVKVEVEEDRVLQISGERNMEKEDKNDKWQRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPK-EEMKKPDVKSIEISG 154          
BLAST of DY271194 vs. ExPASy Swiss-Prot
Match: HS17C_ARATH (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana GN=HSP17.6C PE=2 SV=2)

HSP 1 Score: 195.282 bits (495), Expect = 4.133e-49
Identity = 101/162 (62.35%), Postives = 120/162 (74.07%), Query Frame = 2
Query:   71 MSLIPSFFGNRRSSVFDPFSLDVWDPFRDFPLPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEISG 556
            MSLIPS FG RR++VFDPFSLDV+DPF  F  PSG ++A +     + +A  NA+VDW+ETPEAHVFKADLPGL              LQISG+R  E E+KND WHR ERSSG F+RRFRLPEN KM++IKASMENGVL+VTVPKV E +K   K+I+ISG
Sbjct:    1 MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAPAM----DVAAFTNAKVDWRETPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPENAKMEEIKASMENGVLSVTVPKVPE-KKPEVKSIDISG 157          
BLAST of DY271194 vs. ExPASy Swiss-Prot
Match: HSP11_HELAN (17.6 kDa class I heat shock protein OS=Helianthus annuus GN=HSP17.6 PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 9.207e-49
Identity = 97/162 (59.88%), Postives = 118/162 (72.84%), Query Frame = 2
Query:   71 MSLIPSFFGNRRSSVFDPFSLDVWDPFRDFPLPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEISG 556
            MS+IPSFF ++RS++FDPFSLD WDPF+           +S++   ET+A+VNAR+DWKETPEAHV KADLPG+              LQISG+R  E+E+K+DTWHR ERSSG F RRFRLPEN KMD++KA MENGVLTV VPK EE +K   KAI+ISG
Sbjct:    1 MSIIPSFFTSKRSNIFDPFSLDTWDPFQGI---------ISTEPARETAAIVNARIDWKETPEAHVLKADLPGMKKEEVKVEVEDGRVLQISGERCREQEEKDDTWHRVERSSGKFIRRFRLPENAKMDEVKAMMENGVLTVVVPKEEEEKKPMVKAIDISG 153          
BLAST of DY271194 vs. ExPASy Swiss-Prot
Match: HSP17_ARATH (17.4 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.4A PE=1 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 2.051e-48
Identity = 96/162 (59.26%), Postives = 119/162 (73.46%), Query Frame = 2
Query:   71 MSLIPSFFGNRRSSVFDPFSLDVWDPFRDFPLPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEISG 556
            MSL+PSFFG RR++VFDPFSLDVWDPF  F  P      L++    + +A  NA+VDW+ETPEAHVFKAD+PGL              LQISG+R  E E+K+DTWHR ERSSG F RRFRLPEN K++++KASMENGVL+VTVPKV+E+ K   K+++ISG
Sbjct:    1 MSLVPSFFGGRRTNVFDPFSLDVWDPFEGFLTPG-----LTNAPAKDVAAFTNAKVDWRETPEAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPENAKVEEVKASMENGVLSVTVPKVQES-KPEVKSVDISG 156          
BLAST of DY271194 vs. ExPASy Swiss-Prot
Match: HSP11_MEDSA (18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.499e-48
Identity = 97/145 (66.90%), Postives = 108/145 (74.48%), Query Frame = 2
Query:  119 DPFSLDVWDPFRDFPLPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEIS 553
            DPFSLDVWDPF+DFP  +   SA  S FP E SA V+ R+DWKETPEAHVFKADLPGL              LQISG+R +E+EDKND WHR ERSSG F RRFRLPEN KMDQ+KA+MENGVLTVTVPK EE +K   K+IEIS
Sbjct:    1 DPFSLDVWDPFKDFPFTNSALSA--SSFPQENSAFVSTRIDWKETPEAHVFKADLPGLKKEEVKVEIEDDRVLQISGERNVEKEDKNDQWHRVERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPK-EEIKKPEVKSIEIS 142          
BLAST of DY271194 vs. ExPASy Swiss-Prot
Match: HS181_ARATH (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 7.794e-48
Identity = 98/162 (60.49%), Postives = 115/162 (70.99%), Query Frame = 2
Query:   71 MSLIPSFFGNRRSSVFDPFSLDVWDPFRDFPLPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEISG 556
            MSLIPS FG RRS+VFDPFS D+WDPF  F  PS  S+  ++    + +A  NARVDWKETPEAHVFKADLPGL              LQISG+R  E E+KND WHR ER+SG F RRFRLPEN KM+++KA+MENGVLTV VPK  E +K   K+I+ISG
Sbjct:    1 MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPS--SALANASTARDVAAFTNARVDWKETPEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRLPENAKMEEVKATMENGVLTVVVPKAPE-KKPQVKSIDISG 159          
The following BLAST results are available for this feature:
BLAST of DY271194 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
HS17A_ARATH2.191e-5062.6517.6 kDa class I heat shock protein 1 OS=Arabidops... [more]
HSP12_DAUCA8.327e-5061.1118.0 kDa class I heat shock protein OS=Daucus caro... [more]
HSP12_SOLPE1.420e-4964.4217.6 kDa class I heat shock protein OS=Solanum per... [more]
HSP11_SOLLC1.855e-4963.1917.8 kDa class I heat shock protein OS=Solanum lyc... [more]
HSP11_SOLPE4.133e-4963.8017.7 kDa class I heat shock protein OS=Solanum per... [more]
HS17C_ARATH4.133e-4962.3517.6 kDa class I heat shock protein 3 OS=Arabidops... [more]
HSP11_HELAN9.207e-4959.8817.6 kDa class I heat shock protein OS=Helianthus ... [more]
HSP17_ARATH2.051e-4859.2617.4 kDa class I heat shock protein OS=Arabidopsis... [more]
HSP11_MEDSA3.499e-4866.9018.1 kDa class I heat shock protein (Fragment) OS=... [more]
HS181_ARATH7.794e-4860.4918.1 kDa class I heat shock protein OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YC20FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271194 ID=DY271194; Name=DY271194; organism=Citrus clementina; type=EST; length=911bp
CACTTGCGTATCCTGCATTCTGCAACACCTACTTTTCTATTAGTTCATAA
CCCGAAAAGAAAGCTAGAAAATGTCGCTGATTCCAAGCTTCTTCGGCAAC
CGACGCAGCAGTGTGTTCGATCCATTCTCGCTCGACGTTTGGGATCCATT
CAGGGACTTCCCTTTGCCGTCTGGTTATTCGTCTGCGCTGTCCTCCCAGT
TCCCTCCAGAAACCTCCGCTGTCGTTAACGCCCGCGTGGACTGGAAGGAA
ACCCCGGAAGCCCACGTGTTCAAGGCCGATCTCCCGGGGCTGAGGAAAGA
GGAAGTGAAGGTCGAGGTCGAGGACGACAGGGTGCTTCAGATAAGCGGGC
AGAGGGGGATCGAGAGGGAGGACAAGAACGACACGTGGCATCGCTGGGAG
CGCAGCAGCGGCATGTTCTCGAGGAGGTTCAGGCTGCCTGAGAATGTGAA
GATGGATCAGATAAAGGCTTCCATGGAGAATGGTGTGCTCACTGTTACAG
TCCCTAAGGTGGAGGAGGCCAGGAAAGCTAATGCCAAGGCTATTGAAATT
TCTGGCTGATAAATTGATATATTTAATAAACGAAGATGATTTAAAATTTG
TGTTGAATCCCGAGTGTGTTTGCGTGGTTTATTACCTCGCTCCGTGTTGA
ATTTAAGTGACGCCTAACATTTTTGTGTGGCGTGTAACCAAGAGAAGGGT
AAGTTAGTAAACCCCGCGCCTCCCTTAGAAATAGGGTAAAAGGTGGTCCG
TCACCCTCTGAAAAGTAAAAAAACAAAAGCAACACCAAAAAATCGGAATT
AACCACAACGCAACCCCACGCTTAAAGATTCCAACAAAAAAAACAAAAAT
CAAACAAACGAAAACTACCAACACATTATTGGACCAAGATATAGGAAAAG
AAAAAAGAAAA
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