DY271194

Overview
NameDY271194
Unique NameDY271194
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length911
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271194 vs. ExPASy Swiss-Prot
Match: HSP11_CHERU (18.3 kDa class I heat shock protein OS=Chenopodium rubrum GN=HSP18 PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 3.275e-46
Identity = 100/163 (61.35%), Postives = 117/163 (71.78%), Query Frame = 2
Query:   71 MSLIPSFFGN--RRSSVFDPFSLD-VWDPFRDFPLPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEI 550
            MSLIP+ + N  RRS++FDPFSLD +WDPF  F LPS  S+   S+   ET+A  NAR+DWKETPEAHVFKADLPG+              L+ISGQR  E+E+KNDTWHR ERSSG F R+FRLPEN K+DQ+KA MENGVLTVTVPK  EA K   KAI +
Sbjct:    1 MSLIPNNWFNTGRRSNIFDPFSLDEIWDPF--FGLPSTLSTVPRSETAAETAAFANARIDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLRISGQRAREKEEKNDTWHRVERSSGQFMRKFRLPENAKVDQVKAGMENGVLTVTVPK-NEAPKPQVKAINV 160          
BLAST of DY271194 vs. ExPASy Swiss-Prot
Match: HS17A_ORYSJ (17.9 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.9A PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 7.295e-46
Identity = 99/158 (62.66%), Postives = 114/158 (72.15%), Query Frame = 2
Query:  101 RRSSVFDPFSLDVWDPFRDFPLPSGYSSALS--SQFP----PETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEISG 556
            RRS+VFDPFSLD+WDPF  FP  SG SS+ S    FP     ET+A   AR+DWKETPEAHVFKAD+PGL              LQISG+R  E+E+K D WHR ERSSG F RRFRLP+N K +QIKASMENGVLTVTVPK EEA+K + K+I+ISG
Sbjct:    5 RRSNVFDPFSLDLWDPFDGFPFGSGGSSSGSIFPSFPRGASSETAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPEQIKASMENGVLTVTVPK-EEAKKPDVKSIQISG 161          
BLAST of DY271194 vs. ExPASy Swiss-Prot
Match: HS181_ORYSJ (18.1 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 8.066e-45
Identity = 95/158 (60.13%), Postives = 112/158 (70.89%), Query Frame = 2
Query:  101 RRSSVFDPFSLDVWDPFRDFPLPSGY--SSALSSQFP----PETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEISG 556
            RRS+VFDPFSLD+WDPF  FP  SG   S ++   FP     ET+A   AR+DWKETPEAHVFKAD+PGL              LQISG+R  E+E+K D WHR ERSSG F RRFRLPEN K +QIKASMENGVLTVTVPK EE +K + K+I+++G
Sbjct:    5 RRSNVFDPFSLDLWDPFDGFPFGSGSRSSGSIFPSFPRGTSSETAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTVPK-EEPKKPDVKSIQVTG 161          
BLAST of DY271194 vs. ExPASy Swiss-Prot
Match: HS16B_ORYSJ (16.9 kDa class I heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP16.9B PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.797e-44
Identity = 93/152 (61.18%), Postives = 107/152 (70.39%), Query Frame = 2
Query:  101 RRSSVFDPFSLDVWDPFRDFPLPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEISG 556
            RRS+VFDPFSLD+WDPF      S + S + +    +T+A  NAR+DWKETPE+HVFKADLPG+              L ISGQR  E+EDKND WHR ERSSG F RRFRLPEN K+DQ+KA MENGVLTVTVPK  E +K   KAIEISG
Sbjct:    5 RRSNVFDPFSLDLWDPF-----DSVFRSVVPATSDNDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGMENGVLTVTVPKA-EVKKPEVKAIEISG 150          
BLAST of DY271194 vs. ExPASy Swiss-Prot
Match: HS16A_ORYSJ (16.9 kDa class I heat shock protein 1 OS=Oryza sativa subsp. japonica GN=HSP16.9A PE=1 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 4.003e-44
Identity = 92/152 (60.53%), Postives = 107/152 (70.39%), Query Frame = 2
Query:  101 RRSSVFDPFSLDVWDPFRDFPLPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEISG 556
            RRS+VFDPFSLD+WDPF      S + S + +    +T+A  NAR+DWKETPE+HVFKADLPG+              L ISGQR  E+EDKND WHR ERSSG F RRFRLPEN K+DQ+KA +ENGVLTVTVPK  E +K   KAIEISG
Sbjct:    5 RRSNVFDPFSLDLWDPF-----DSVFRSVVPATSDNDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGLENGVLTVTVPKA-EVKKPEVKAIEISG 150          
BLAST of DY271194 vs. ExPASy Swiss-Prot
Match: HS174_ORYSJ (17.4 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.4 PE=2 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 5.228e-44
Identity = 93/152 (61.18%), Postives = 110/152 (72.37%), Query Frame = 2
Query:  101 RRSSVFDPFSLDVWDPFRDFPLPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEISG 556
            RRS+VFDPFSLD+WDPF  FP  SG S +L  +   + +A   AR+DWKETPEAHVFKAD+PGL              LQISG+R  E+E+K D WHR ERSSG F RRFRLPEN K +QIKASMENGVLTVTVPK EE +K + K+I+I+G
Sbjct:    5 RRSNVFDPFSLDLWDPFDGFPFGSG-SGSLFPRANSDAAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTVPK-EEPKKPDVKSIQITG 154          
BLAST of DY271194 vs. ExPASy Swiss-Prot
Match: HS177_ORYSJ (17.7 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.987e-43
Identity = 92/156 (58.97%), Postives = 108/156 (69.23%), Query Frame = 2
Query:  101 RRSSVFDPFSLDVWDPFRDFPLPSGYSSALSSQFPP----ETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEISG 556
            RR + FDPFSLD+WDP   FP  SG SS+ S    P    + +A   AR+DWKETPE HVFKAD+PGL              LQISG+R  E+E+K+D WHR ERSSG F RRFRLPEN K +QIKASMENGVLTVTVPK EE +K + K+I+ISG
Sbjct:    5 RRGNAFDPFSLDLWDPVDGFPFGSGGSSSSSGSLFPRANSDAAAFAGARIDWKETPEVHVFKADVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTVPK-EEPKKPDVKSIQISG 159          
BLAST of DY271194 vs. ExPASy Swiss-Prot
Match: HS16C_ORYSJ (16.9 kDa class I heat shock protein 3 OS=Oryza sativa subsp. japonica GN=HSP16.9C PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.893e-42
Identity = 92/152 (60.53%), Postives = 105/152 (69.08%), Query Frame = 2
Query:  101 RRSSVFDPFSLDVWDPFRDFPLPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEISG 556
            RRS+VFDPF+ D WDPF        + S + +    +T+A  NARVDWKETPE+HVFKADLPG+              L ISGQR  E+EDKND WHR ERSSG F RRFRLPEN K+DQ+KASMENGVLTVTVPK  E +K   KAIEISG
Sbjct:    5 RRSNVFDPFA-DFWDPFDGV-----FRSLVPATSDRDTAAFANARVDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKASMENGVLTVTVPKA-EVKKPEVKAIEISG 149          
BLAST of DY271194 vs. ExPASy Swiss-Prot
Match: HS16A_WHEAT (16.9 kDa class I heat shock protein 1 OS=Triticum aestivum GN=hsp16.9A PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 5.064e-39
Identity = 91/157 (57.96%), Postives = 106/157 (67.52%), Query Frame = 2
Query:  101 RRSSVFDPFSLDVW-DPFRDF----PLPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEISG 556
            RRS+VFDPF+ D+W DPF  F    P  SG SS        ET+A  NARVDWKETPEAHVFK DLPG+              L +SG+R  E+EDKND WHR ERSSG F RRFRLPE+ K++++KA +ENGVLTVTVPK  E +K   KAIEISG
Sbjct:    5 RRSNVFDPFA-DLWADPFDTFRSIVPAISGGSS--------ETAAFANARVDWKETPEAHVFKVDLPGVKKEEVKVEVEDGNVLVVSGERSREKEDKNDKWHRVERSSGKFVRRFRLPEDAKVEEVKAGLENGVLTVTVPKA-EVKKPEVKAIEISG 151          
BLAST of DY271194 vs. ExPASy Swiss-Prot
Match: HS16B_WHEAT (16.9 kDa class I heat shock protein 2 OS=Triticum aestivum GN=hsp16.9B PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.379e-36
Identity = 87/157 (55.41%), Postives = 105/157 (66.88%), Query Frame = 2
Query:  101 RRSSVFDPFSLDVW-DPFRDF----PLPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEISG 556
            RR++VFDPF+ D+W DPF  F    P  SG  S        ET+A  NAR+DWKETPEAHVFKADLPG+              L +SG+R  E+EDKND WHR ERSSG F RRFRL E+ K++++KA +ENGVLTVTVPK  E +K   KAI+ISG
Sbjct:    5 RRTNVFDPFA-DLWADPFDTFRSIVPAISGGGS--------ETAAFANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKAGLENGVLTVTVPKA-EVKKPEVKAIQISG 151          
The following BLAST results are available for this feature:
BLAST of DY271194 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
HSP11_CHERU3.275e-4661.3518.3 kDa class I heat shock protein OS=Chenopodium... [more]
HS17A_ORYSJ7.295e-4662.6617.9 kDa class I heat shock protein OS=Oryza sativ... [more]
HS181_ORYSJ8.066e-4560.1318.1 kDa class I heat shock protein OS=Oryza sativ... [more]
HS16B_ORYSJ1.797e-4461.1816.9 kDa class I heat shock protein 2 OS=Oryza sat... [more]
HS16A_ORYSJ4.003e-4460.5316.9 kDa class I heat shock protein 1 OS=Oryza sat... [more]
HS174_ORYSJ5.228e-4461.1817.4 kDa class I heat shock protein OS=Oryza sativ... [more]
HS177_ORYSJ1.987e-4358.9717.7 kDa class I heat shock protein OS=Oryza sativ... [more]
HS16C_ORYSJ4.893e-4260.5316.9 kDa class I heat shock protein 3 OS=Oryza sat... [more]
HS16A_WHEAT5.064e-3957.9616.9 kDa class I heat shock protein 1 OS=Triticum ... [more]
HS16B_WHEAT1.379e-3655.4116.9 kDa class I heat shock protein 2 OS=Triticum ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YC20FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271194 ID=DY271194; Name=DY271194; organism=Citrus clementina; type=EST; length=911bp
CACTTGCGTATCCTGCATTCTGCAACACCTACTTTTCTATTAGTTCATAA
CCCGAAAAGAAAGCTAGAAAATGTCGCTGATTCCAAGCTTCTTCGGCAAC
CGACGCAGCAGTGTGTTCGATCCATTCTCGCTCGACGTTTGGGATCCATT
CAGGGACTTCCCTTTGCCGTCTGGTTATTCGTCTGCGCTGTCCTCCCAGT
TCCCTCCAGAAACCTCCGCTGTCGTTAACGCCCGCGTGGACTGGAAGGAA
ACCCCGGAAGCCCACGTGTTCAAGGCCGATCTCCCGGGGCTGAGGAAAGA
GGAAGTGAAGGTCGAGGTCGAGGACGACAGGGTGCTTCAGATAAGCGGGC
AGAGGGGGATCGAGAGGGAGGACAAGAACGACACGTGGCATCGCTGGGAG
CGCAGCAGCGGCATGTTCTCGAGGAGGTTCAGGCTGCCTGAGAATGTGAA
GATGGATCAGATAAAGGCTTCCATGGAGAATGGTGTGCTCACTGTTACAG
TCCCTAAGGTGGAGGAGGCCAGGAAAGCTAATGCCAAGGCTATTGAAATT
TCTGGCTGATAAATTGATATATTTAATAAACGAAGATGATTTAAAATTTG
TGTTGAATCCCGAGTGTGTTTGCGTGGTTTATTACCTCGCTCCGTGTTGA
ATTTAAGTGACGCCTAACATTTTTGTGTGGCGTGTAACCAAGAGAAGGGT
AAGTTAGTAAACCCCGCGCCTCCCTTAGAAATAGGGTAAAAGGTGGTCCG
TCACCCTCTGAAAAGTAAAAAAACAAAAGCAACACCAAAAAATCGGAATT
AACCACAACGCAACCCCACGCTTAAAGATTCCAACAAAAAAAACAAAAAT
CAAACAAACGAAAACTACCAACACATTATTGGACCAAGATATAGGAAAAG
AAAAAAGAAAA
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