DY271194

Overview
NameDY271194
Unique NameDY271194
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length911
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271194 vs. ExPASy Swiss-Prot
Match: HS166_ORYSJ (16.6 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP16.6 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.751e-29
Identity = 78/158 (49.37%), Postives = 92/158 (58.23%), Query Frame = 2
Query:  101 RRSSVFDPFSLDVW---DPFRDFPLPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRGIERE--DKNDT-WHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEISG 556
            R  +V DP S+D W   DPF       G   +L+ + P     + N RVDWKETP AHVF ADLPG+              L ISG+R  E +   KND  WH  ERSSG F RRFRLP   ++DQ+ ASM+NGVLTVTVPK EE +K   KAI ISG
Sbjct:    5 RSGNVLDPMSVDFWADADPF-------GAVRSLAERCP----VLTNVRVDWKETPTAHVFTADLPGVRKDQAKVEVEDGGVLVISGERAREEDVDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASMDNGVLTVTVPK-EETKKPQLKAIPISG 150          
BLAST of DY271194 vs. ExPASy Swiss-Prot
Match: HSP12_SOYBN (Class I heat shock protein (Fragment) OS=Glycine max GN=HSP6834-A PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 9.271e-25
Identity = 56/74 (75.68%), Postives = 64/74 (86.49%), Query Frame = 2
Query:  335 LQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEISG 556
            LQISG+R +E+EDKNDTWHR ERSSG F R FRLP+N K+DQ+KASMENGVLTVTVPK EE +K + KAIEISG
Sbjct:    2 LQISGERNVEKEDKNDTWHRVERSSGKFMRSFRLPDNAKVDQVKASMENGVLTVTVPK-EEIKKPDVKAIEISG 74          
BLAST of DY271194 vs. ExPASy Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.849e-24
Identity = 62/147 (42.18%), Postives = 82/147 (55.78%), Query Frame = 2
Query:  134 DVW-----DPFRDFP-LPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEISG 556
            D+W     DPFR    +P G     +S       A+  ARVDWKETPE HV   D+PGL              L++SG+R  E E K D WHR ERS G F R+FRLP+NV +D +KA +ENGVLT+T+ K+   +    + + I+G
Sbjct:   35 DLWSDRFPDPFRVLEHIPFGVDKDEASM------AMSPARVDWKETPEGHVIMLDVPGLKREEIKVEVEENRVLRVSGERKKEEEKKGDHWHRVERSYGKFWRQFRLPQNVDLDSVKAKLENGVLTLTLDKLSPGKIKGPRVVSIAG 175          
BLAST of DY271194 vs. ExPASy Swiss-Prot
Match: HSP41_PEA (22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.480e-22
Identity = 64/162 (39.51%), Postives = 88/162 (54.32%), Query Frame = 2
Query:   68 KMSLIPSFFGNRRSSVFDPFSLDVWDPFRDFP-LPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEI 550
            K SL+P F  +  + + D +S    DPFR    +P G      S        + +ARVDWKETPE HV   D+PGL              L++SG+R  E + K D WHR ERS G F R+F+LP+NV +D +KA MENGVLT+T+ K+   +    + + I
Sbjct:   27 KASLLP-FIDSPNTLLSDLWSDRFPDPFRVLEQIPYGVEKHEPS------ITLSHARVDWKETPEGHVIMVDVPGLKKDDIKIEVEENRVLRVSGERKKEEDKKGDHWHRVERSYGKFWRQFKLPQNVDLDSVKAKMENGVLTLTLHKLSHDKIKGPRMVSI 181          
BLAST of DY271194 vs. ExPASy Swiss-Prot
Match: HS189_ORYSJ (18.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.9 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.525e-22
Identity = 58/145 (40.00%), Postives = 83/145 (57.24%), Query Frame = 2
Query:  119 DPFSLDVWDPFRDFPLPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEIS 553
            +P S+D+ +PF D    + +++A S+           A +DWKET  AHVF AD+PG+              L+ISGQR    E+K + WHR ERSS  F R  RLP N   D + A+++NGVLT+T+PK +  RK +A+ I I+
Sbjct:   34 EPVSVDIMEPFMDAISLTAFAAAPSAA-AAAAGVPSTASMDWKETAAAHVFMADMPGVRREEVRVEVEEEKVLRISGQRARAAEEKGERWHRVERSSERFVRTVRLPPNANTDGVHAALDNGVLTITIPK-DNDRKPHARIIPIT 176          
BLAST of DY271194 vs. ExPASy Swiss-Prot
Match: HSP22_ARATH (22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.061e-20
Identity = 54/141 (38.30%), Postives = 76/141 (53.90%), Query Frame = 2
Query:  134 DVWDPFRDFPLPSGYSSALSSQFPPETSAVVN-ARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEIS 553
            D+W     FP P      +      +TS  ++ ARVDWKET E H    D+PGL              L++SG+R  E E K D WHR ERS G F R+F+LP+NV M+ +KA +ENGVLT+ + K+   +    + + I+
Sbjct:   40 DLW--LDRFPDPFKILERIPLGLERDTSVALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQFKLPDNVDMESVKAKLENGVLTINLTKLSPEKVKGPRVVNIA 178          
BLAST of DY271194 vs. ExPASy Swiss-Prot
Match: HS17B_ORYSJ (17.9 kDa heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP17.9B PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.613e-19
Identity = 53/134 (39.55%), Postives = 76/134 (56.72%), Query Frame = 2
Query:  113 VFDPFSLDVWDPFRDFPLPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLP-GLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKV 511
            +FD  + D W+PF  F    G + A  +    +TSA  N  ++ +ET EA+VF+ADLP G+              L I+G+R + RE+K    H  ERS   F  RF LP++  +D ++ASM+ G+LTVTVPKV
Sbjct:    6 LFDTLAFDAWNPFSIF----GTTVAADAWLASDTSAFANTYIESRETAEAYVFRADLPAGVKKEEVRVEVDEGNVLVITGERSVRREEKGQRSHHIERSCATFFGRFHLPDDAVVDLVRASMDGGMLTVTVPKV 135          
BLAST of DY271194 vs. ExPASy Swiss-Prot
Match: HS219_ORYSJ (21.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP21.9 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.435e-18
Identity = 58/154 (37.66%), Postives = 83/154 (53.90%), Query Frame = 2
Query:  119 DPFSLDVWDPFRDFPLPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXX-LQISGQR---GIEREDKNDT----WHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEISG 556
            DPF +    P R    P+G  +A ++   P  +AV  AR DWKETPEAHV   D+PG+               L++SG+R   G   E++ +     WHR ER++G F RRFR+P    + ++ A +++GVLTVTVPKV   R    + + I G
Sbjct:   41 DPFRVLEQSPLR----PAGGVAAAAAAGEP--AAVALARCDWKETPEAHVVTVDVPGVRRGDVRVEVDEASRVLRVSGERRRAGAAEEEEGERDGVRWHRAERAAGRFWRRFRMPPGADVGRVAARLDDGVLTVTVPKVPGHRGREPRVVAIDG 188          
BLAST of DY271194 vs. ExPASy Swiss-Prot
Match: HS232_ORYSJ (23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP23.2 PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.989e-15
Identity = 56/153 (36.60%), Postives = 79/153 (51.63%), Query Frame = 2
Query:   74 SLIPSFFGN--RRSSVFDPFSLDVWDPFRDFP-LPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRG----IEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKV 511
            +L+P F G   R  +V +   L   DPFR    +P G+          + + +  ARVDW+ET +AH    D+PG+              L+ISG+R      E++   D WHR ERS G F R+ RLP+N  +D I AS++NGVLTV   K+
Sbjct:   28 ALLPWFGGGGARDEAVPELGLLAAADPFRILEHVPFGFDR-------DDVAMLSMARVDWRETGDAHEVVVDVPGMRKEDLRVEVEDNRVLRISGERRREETTEQKGGGDHWHREERSYGRFWRQLRLPDNADLDSIAASLDNGVLTVRFRKL 173          
BLAST of DY271194 vs. ExPASy Swiss-Prot
Match: SP21_STIAU (Spore protein SP21 OS=Stigmatella aurantiaca GN=hspA PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.531e-14
Identity = 50/145 (34.48%), Postives = 78/145 (53.79%), Query Frame = 2
Query:  101 RRSSVFDPFS----LDVWDPFRDFPLPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEAR 523
            +R+  +DPF     L  WDPF      + +    + Q PP        R    ET EA++FKADLPG+              + +SG+R  E+ ++++ ++ +ER+ G FSR F LPE V  D ++A ++NGVLT+T+PK  E +
Sbjct:   15 QRTREWDPFQQMQELMNWDPFE----LANHPWFANRQGPPAFVPAFEVR----ETKEAYIFKADLPGVDEKDIEVTLTGDR-VSVSGKREREKREESERFYAYERTFGSFSRAFTLPEGVDGDNVRADLKNGVLTLTLPKRPEVQ 150          
The following BLAST results are available for this feature:
BLAST of DY271194 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
HS166_ORYSJ4.751e-2949.3716.6 kDa heat shock protein OS=Oryza sativa subsp.... [more]
HSP12_SOYBN9.271e-2575.68Class I heat shock protein (Fragment) OS=Glycine m... [more]
HSP41_SOYBN7.849e-2442.1822.0 kDa class IV heat shock protein OS=Glycine ma... [more]
HSP41_PEA1.480e-2239.5122.7 kDa class IV heat shock protein OS=Pisum sati... [more]
HS189_ORYSJ2.525e-2240.0018.9 kDa heat shock protein OS=Oryza sativa subsp.... [more]
HSP22_ARATH1.061e-2038.3022.0 kDa heat shock protein OS=Arabidopsis thalian... [more]
HS17B_ORYSJ2.613e-1939.5517.9 kDa heat shock protein 2 OS=Oryza sativa subs... [more]
HS219_ORYSJ6.435e-1837.6621.9 kDa heat shock protein OS=Oryza sativa subsp.... [more]
HS232_ORYSJ2.989e-1536.6023.2 kDa heat shock protein OS=Oryza sativa subsp.... [more]
SP21_STIAU2.531e-1434.48Spore protein SP21 OS=Stigmatella aurantiaca GN=hs... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YC20FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271194 ID=DY271194; Name=DY271194; organism=Citrus clementina; type=EST; length=911bp
CACTTGCGTATCCTGCATTCTGCAACACCTACTTTTCTATTAGTTCATAA
CCCGAAAAGAAAGCTAGAAAATGTCGCTGATTCCAAGCTTCTTCGGCAAC
CGACGCAGCAGTGTGTTCGATCCATTCTCGCTCGACGTTTGGGATCCATT
CAGGGACTTCCCTTTGCCGTCTGGTTATTCGTCTGCGCTGTCCTCCCAGT
TCCCTCCAGAAACCTCCGCTGTCGTTAACGCCCGCGTGGACTGGAAGGAA
ACCCCGGAAGCCCACGTGTTCAAGGCCGATCTCCCGGGGCTGAGGAAAGA
GGAAGTGAAGGTCGAGGTCGAGGACGACAGGGTGCTTCAGATAAGCGGGC
AGAGGGGGATCGAGAGGGAGGACAAGAACGACACGTGGCATCGCTGGGAG
CGCAGCAGCGGCATGTTCTCGAGGAGGTTCAGGCTGCCTGAGAATGTGAA
GATGGATCAGATAAAGGCTTCCATGGAGAATGGTGTGCTCACTGTTACAG
TCCCTAAGGTGGAGGAGGCCAGGAAAGCTAATGCCAAGGCTATTGAAATT
TCTGGCTGATAAATTGATATATTTAATAAACGAAGATGATTTAAAATTTG
TGTTGAATCCCGAGTGTGTTTGCGTGGTTTATTACCTCGCTCCGTGTTGA
ATTTAAGTGACGCCTAACATTTTTGTGTGGCGTGTAACCAAGAGAAGGGT
AAGTTAGTAAACCCCGCGCCTCCCTTAGAAATAGGGTAAAAGGTGGTCCG
TCACCCTCTGAAAAGTAAAAAAACAAAAGCAACACCAAAAAATCGGAATT
AACCACAACGCAACCCCACGCTTAAAGATTCCAACAAAAAAAACAAAAAT
CAAACAAACGAAAACTACCAACACATTATTGGACCAAGATATAGGAAAAG
AAAAAAGAAAA
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