DY271194

Overview
NameDY271194
Unique NameDY271194
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length911
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271194 vs. ExPASy Swiss-Prot
Match: HS157_ARATH (15.7 kDa heat shock protein, peroxisomal OS=Arabidopsis thaliana GN=HSP15.7 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.317e-14
Identity = 42/113 (37.17%), Postives = 61/113 (53.98%), Query Frame = 2
Query:  230 ARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSS-----GMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEIS 553
            A +DW E+  +H+FK ++PG               L I G+   E + +N  WH  ER +       F RR  LPENVK+DQ+KA +ENGVLTV VPK   ++ +  + + I+
Sbjct:   22 ALIDWMESNNSHIFKINVPGYNKEDIKVQIEEGNVLSIRGEGIKEEKKENLVWHVAEREAFSGGGSEFLRRIELPENVKVDQVKAYVENGVLTVVVPKDTSSKSSKVRNVNIT 134          
BLAST of DY271194 vs. ExPASy Swiss-Prot
Match: HSP16_ORYSJ (16.0 kDa heat shock protein, peroxisomal OS=Oryza sativa subsp. japonica GN=HSP16.0 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.640e-13
Identity = 46/126 (36.51%), Postives = 66/126 (52.38%), Query Frame = 2
Query:  200 FPPE-TSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISG-------QRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEIS 553
            FPP+  SA   A +DW ETP +HV + ++PGL              L + G       ++  ERE K+  WH  ER    F+R   LP  V+++QI+AS++NGVLTV VPK     +   + I +S
Sbjct:   19 FPPDWASASATAAMDWVETPTSHVLRINVPGLGKDDVKVQVEDGNVLTVRGAAPHAAAEKERERE-KDVVWHVAERGRPEFAREVALPAEVRVEQIRASVDNGVLTVVVPKEPAPARPRTRPIAVS 143          
BLAST of DY271194 vs. ExPASy Swiss-Prot
Match: HSP21_SOLPE (17.3 kDa class II heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.233e-13
Identity = 45/123 (36.59%), Postives = 60/123 (48.78%), Query Frame = 2
Query:  182 SALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEI 550
            +A S  +  +  A+     D KE P ++VF  D+PGL              L ISG+R  E E +   + R ER  G F R+F LPEN   D I A  ++GVLTVTV K+        K IE+
Sbjct:   30 NAPSKIYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEEDNVLLISGERKREEEKEGAKFIRMERRVGKFMRKFSLPENANTDAISAVCQDGVLTVTVQKLPPPEPKKPKTIEV 152          
BLAST of DY271194 vs. ExPASy Swiss-Prot
Match: HS185_ARATH (18.5 kDa class IV heat shock protein OS=Arabidopsis thaliana GN=HSP18.5 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.369e-12
Identity = 61/183 (33.33%), Postives = 84/183 (45.90%), Query Frame = 2
Query:   71 MSLIPSFFGNRR-----SSVFDPFSLDVWDPFRDFPLPSGYSS----ALSSQ-FPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTV-----------PKVEEARKANAKAIEISG 556
            MS+IP    NRR       +++PF L   + F DFP P+ + S    +LS + FP  +S+ VN +++W ETP AHVFKA LPG+              LQI                        F  RF+LP N   DQ+ A ME+  L V V           P++EE R  N + +EI+G
Sbjct:    1 MSMIP--ISNRRRLSPGDRIWEPFEL--MNTFLDFPSPALFLSHHFPSLSREIFPQTSSSTVNTQLNWTETPTAHVFKAYLPGVDQDEVIAFVDEEGYLQIC------------------TGDNKFMSRFKLPNNALTDQVTAWMEDEFLVVFVEKDASSSPPQLPEIEENR--NVRVVEITG 159          
BLAST of DY271194 vs. ExPASy Swiss-Prot
Match: HSP21_IPONI (17.2 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.040e-12
Identity = 47/128 (36.72%), Postives = 62/128 (48.44%), Query Frame = 2
Query:  170 SGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWH-RWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEI 550
            S  SSA S  F  +  A+     D KE P ++VF  D+PGL              L ISG+R  E E+K    + R ER  G   R+F LPEN   ++I A  ++GVLTVTV  V        + IE+
Sbjct:   25 SSNSSAPSRTFMLDAKAMAATPADVKEYPNSYVFIIDMPGLKSGDIKVQVDGDNVLSISGERKREAEEKEGAKYVRMERRVGKLMRKFVLPENANKEKITAVCQDGVLTVTVENVPPPEPKKPRTIEV 152          
BLAST of DY271194 vs. ExPASy Swiss-Prot
Match: HSP21_HELAN (17.9 kDa class II heat shock protein OS=Helianthus annuus GN=HSP17.9 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.040e-12
Identity = 42/124 (33.87%), Postives = 61/124 (49.19%), Query Frame = 2
Query:  179 SSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEI 550
            +S  S  +  +  A+     D KE P ++VF  D+PGL              L ISG+R  E E +   + R ER  G F ++F LPE+   D+I A  ++GVLTVTV K+        K I++
Sbjct:   34 NSGPSRAYVRDARAMAATPADVKECPNSYVFIVDMPGLKSGDIKVQVERDNVLVISGKRNREEEKEGVKYVRMERRMGKFMKKFALPEDANTDKISAICQDGVLTVTVEKLPPPEPKKPKTIQV 157          
BLAST of DY271194 vs. ExPASy Swiss-Prot
Match: HSP22_MAIZE (17.8 kDa class II heat shock protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.001e-12
Identity = 40/127 (31.50%), Postives = 61/127 (48.03%), Query Frame = 2
Query:  170 SGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEI 550
            +G   + +  +  +  A+     D KE P A+ F  D+PGL              L +SG+R  E  + +  + R ER  G F R+F LP+N  +D++ A   +GVLTVTV K+        K IE+
Sbjct:   35 TGSGGSATRTYVRDARAMAATPADVKELPGAYAFVVDMPGLGTGDIRVQVEDERVLVVSGERRREEREDDAKYLRMERRMGKFMRKFVLPDNADVDKVAAVCRDGVLTVTVEKLPPPEPKKPKTIEV 161          
BLAST of DY271194 vs. ExPASy Swiss-Prot
Match: HSP21_MAIZE (17.5 kDa class II heat shock protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.176e-11
Identity = 44/115 (38.26%), Postives = 58/115 (50.43%), Query Frame = 2
Query:  209 ETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWH-RWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEI 550
            +  A+     D KE P A+ F  D+PGL              L ISG+R   RE++ D  + R ER  G F R+F LP+N  MD+I A   +GVLTVTV K+        K IE+
Sbjct:   46 DARAMAVTPADVKELPGAYAFVVDMPGLGTGDIKVQVEDERVLVISGER--RREEREDAKYLRMERRMGKFMRKFVLPDNADMDKISAVCRDGVLTVTVEKLPPPEPKKPKTIEV 158          
BLAST of DY271194 vs. ExPASy Swiss-Prot
Match: HSPC2_RICFE (Small heat shock protein C2 OS=Rickettsia felis GN=hspC2 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.619e-11
Identity = 48/153 (31.37%), Postives = 69/153 (45.10%), Query Frame = 2
Query:   98 NRRSSVFDPFSLDVWDPFRDFPLPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANAKAIEISG 556
            N   ++FD F    ++ F  FP    YSS+      P T        D  ET   +  + +LPG+              L I GQ+  + E+KN  +H  ER  G F R   LP N+  D I A  ENG+L +T+PK E+ +    + IE+ G
Sbjct:   22 NHLDNIFDDF----FNEFYTFP----YSSSTEKNLIPRT--------DISETDSGYSLEVELPGINQKDIDINIDNHI-LTIKGQKEEKSEEKNKNYHMRERYYGSFQRSISLPANINDDAINARFENGILHITIPKKEQGK---TRKIEVKG 154          
BLAST of DY271194 vs. ExPASy Swiss-Prot
Match: HS178_ORYSJ (17.8 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.8 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.420e-11
Identity = 51/146 (34.93%), Postives = 70/146 (47.95%), Query Frame = 2
Query:  179 SSALSSQFPPETSAVVNAR----VDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQI--------------SGQRGIEREDKND--TWHRWERSSGMFSR---RFRLPENVKMDQIKASMENGVLTVTVPKVEEARK--ANAKA 541
            S  L  +F P    VV       +DW+ETP AHVF+ DLPGL              L++              +G+   E E++ND   WH  ER++G       +FRLPE+   D+  A M +GVLTVTVPK +  ++   N KA
Sbjct:    6 SRMLLDRFFPGAGGVVAGEARPPMDWRETPVAHVFEMDLPGLAKDQVAVEVVDGHILRVRAGGEHEDANNAAKAGKASGEEEEENDGVRWHCRERAAGRRRAAVTQFRLPEDAAADEASARMADGVLTVTVPKRKGKKRHAGNGKA 151          
The following BLAST results are available for this feature:
BLAST of DY271194 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
HS157_ARATH4.317e-1437.1715.7 kDa heat shock protein, peroxisomal OS=Arabid... [more]
HSP16_ORYSJ1.640e-1336.5116.0 kDa heat shock protein, peroxisomal OS=Oryza ... [more]
HSP21_SOLPE6.233e-1336.5917.3 kDa class II heat shock protein OS=Solanum pe... [more]
HS185_ARATH2.369e-1233.3318.5 kDa class IV heat shock protein OS=Arabidopsi... [more]
HSP21_IPONI4.040e-1236.7217.2 kDa class II heat shock protein OS=Ipomoea ni... [more]
HSP21_HELAN4.040e-1233.8717.9 kDa class II heat shock protein OS=Helianthus... [more]
HSP22_MAIZE9.001e-1231.5017.8 kDa class II heat shock protein OS=Zea mays P... [more]
HSP21_MAIZE1.176e-1138.2617.5 kDa class II heat shock protein OS=Zea mays P... [more]
HSPC2_RICFE2.619e-1131.37Small heat shock protein C2 OS=Rickettsia felis GN... [more]
HS178_ORYSJ3.420e-1134.9317.8 kDa heat shock protein OS=Oryza sativa subsp.... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YC20FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271194 ID=DY271194; Name=DY271194; organism=Citrus clementina; type=EST; length=911bp
CACTTGCGTATCCTGCATTCTGCAACACCTACTTTTCTATTAGTTCATAA
CCCGAAAAGAAAGCTAGAAAATGTCGCTGATTCCAAGCTTCTTCGGCAAC
CGACGCAGCAGTGTGTTCGATCCATTCTCGCTCGACGTTTGGGATCCATT
CAGGGACTTCCCTTTGCCGTCTGGTTATTCGTCTGCGCTGTCCTCCCAGT
TCCCTCCAGAAACCTCCGCTGTCGTTAACGCCCGCGTGGACTGGAAGGAA
ACCCCGGAAGCCCACGTGTTCAAGGCCGATCTCCCGGGGCTGAGGAAAGA
GGAAGTGAAGGTCGAGGTCGAGGACGACAGGGTGCTTCAGATAAGCGGGC
AGAGGGGGATCGAGAGGGAGGACAAGAACGACACGTGGCATCGCTGGGAG
CGCAGCAGCGGCATGTTCTCGAGGAGGTTCAGGCTGCCTGAGAATGTGAA
GATGGATCAGATAAAGGCTTCCATGGAGAATGGTGTGCTCACTGTTACAG
TCCCTAAGGTGGAGGAGGCCAGGAAAGCTAATGCCAAGGCTATTGAAATT
TCTGGCTGATAAATTGATATATTTAATAAACGAAGATGATTTAAAATTTG
TGTTGAATCCCGAGTGTGTTTGCGTGGTTTATTACCTCGCTCCGTGTTGA
ATTTAAGTGACGCCTAACATTTTTGTGTGGCGTGTAACCAAGAGAAGGGT
AAGTTAGTAAACCCCGCGCCTCCCTTAGAAATAGGGTAAAAGGTGGTCCG
TCACCCTCTGAAAAGTAAAAAAACAAAAGCAACACCAAAAAATCGGAATT
AACCACAACGCAACCCCACGCTTAAAGATTCCAACAAAAAAAACAAAAAT
CAAACAAACGAAAACTACCAACACATTATTGGACCAAGATATAGGAAAAG
AAAAAAGAAAA
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