DY271197

Overview
NameDY271197
Unique NameDY271197
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length900
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: PIT1_SCHPO (Sporulation protein kinase pit1 OS=Schizosaccharomyces pombe GN=pit1 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 4.936e-36
Identity = 61/139 (43.88%), Postives = 95/139 (68.35%), Query Frame = 1
Query:  199 ERYKLIKEVGDGTFGSVWRAISKQ-SGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS-HPNIVKLKEV-IRENDILYFVFEYMECSLYQLMKDREKC-FSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKD 603
            E Y ++++VGDGTFGSV+ A +K  S EVVAIK MKKK     +   LREV SL ++S + NIV + ++ I +   L+ V E+++C+LYQL+  R+    +  +V++   Q+F+GL ++H  G+FHRD+KPEN+L+S +
Sbjct:   34 EVYNVVRKVGDGTFGSVYLATTKTPSKEVVAIKSMKKKLAKVSDATRLREVHSLLRLSENENIVNIFDLYIDQFRCLHIVMEFLDCNLYQLISTRKNDPLTLEQVQDIMRQIFKGLNHIHTNGFFHRDMKPENILISSN 172          

HSP 2 Score: 63.929 bits (154), Expect = 4.936e-36
Identity = 29/36 (80.56%), Postives = 32/36 (88.89%), Query Frame = 2
Query:  608 IKIADSGLAREINSRPPFTEYVLTRWYRAPEVLPPD 715
            +KIAD GLAREINSRPP+TEYV TRWYRAPE+L  D
Sbjct:  180 VKIADFGLAREINSRPPYTEYVSTRWYRAPELLLRD 215          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: MOK_HUMAN (MAPK/MAK/MRK overlapping kinase OS=Homo sapiens GN=RAGE PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.041e-32
Identity = 53/139 (38.13%), Postives = 95/139 (68.35%), Query Frame = 1
Query:  196 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS-HPNIVKLKEVI--RENDILYFVFEYMECSLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKD 603
            M+ YK I ++G+GTF  V +  S + G   A K+MK+++ S E+  NLRE+++LR+++ HPNI+ L EV+  R++  L  + E M+ ++Y+L++ R    SE ++ ++ +Q+ + L ++H+ G FHRD+KPEN+L+ +D
Sbjct:    1 MKNYKAIGKIGEGTFSEVMKMQSLRDGNYYACKQMKQRFESIEQVNNLREIQALRRLNPHPNILMLHEVVFDRKSGSLALICELMDMNIYELIRGRRYPLSEKKIMHYMYQLCKSLDHIHRNGIFHRDVKPENILIKQD 139          

HSP 2 Score: 48.9062 bits (115), Expect = 3.041e-32
Identity = 20/42 (47.62%), Postives = 28/42 (66.67%), Query Frame = 2
Query:  590 LFQKTTIKIADSGLAREINSRPPFTEYVLTRWYRAPEVLPPD 715
            L ++  +K+ D G  R + S+ P+TEY+ TRWYRAPE L  D
Sbjct:  135 LIKQDVLKLGDFGSCRSVYSKQPYTEYISTRWYRAPECLLTD 176          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: MOK_MOUSE (MAPK/MAK/MRK overlapping kinase OS=Mus musculus GN=Rage PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.931e-31
Identity = 54/139 (38.85%), Postives = 93/139 (66.91%), Query Frame = 1
Query:  196 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMS-HPNIVKLKEVI--RENDILYFVFEYMECSLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKD 603
            M+ YK I ++G+GTF  V +  S + G   A K+MK+ + S E+  +LRE+++LR+++ HPNI+ L EV+  R++  L  + E M+ ++Y+L++ R    SE ++  + +Q+ + L +MH+ G FHRD+KPEN+LV +D
Sbjct:    1 MKNYKAIGKIGEGTFSEVMKMQSLRDGNYYACKQMKQHFESIEQVNSLREIQALRRLNPHPNILALHEVVFDRKSGSLALICELMDMNIYELIRGRRHPLSEKKIMLYMYQLCKSLDHMHRNGIFHRDVKPENILVKQD 139          

HSP 2 Score: 48.521 bits (114), Expect = 1.931e-31
Identity = 20/42 (47.62%), Postives = 28/42 (66.67%), Query Frame = 2
Query:  590 LFQKTTIKIADSGLAREINSRPPFTEYVLTRWYRAPEVLPPD 715
            L ++  +K+ D G  R + S+ P+TEY+ TRWYRAPE L  D
Sbjct:  135 LVKQDVLKLGDFGSCRSVYSKQPYTEYISTRWYRAPECLLTD 176          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: CDK2_XENLA (Cell division protein kinase 2 OS=Xenopus laevis GN=cdk2 PE=1 SV=3)

HSP 1 Score: 106.686 bits (265), Expect = 5.730e-27
Identity = 53/138 (38.41%), Postives = 91/138 (65.94%), Query Frame = 1
Query:  196 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYS-WEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECSLYQLMKDRE-KCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKD 603
            ME ++ ++++G+GT+G V++A ++++GE+VA+KK++    +       +RE+  L++++HPNIVKL +VI   + LY VFE++   L + M        S A V+++ FQ+ QGLA+ H     HRDLKP+NLL++ D
Sbjct:    1 MENFQKVEKIGEGTYGVVYKARNRETGEIVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLNQDLKKFMDGSNISGISLALVKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINSD 138          

HSP 2 Score: 35.8094 bits (81), Expect = 5.730e-27
Identity = 19/34 (55.88%), Postives = 22/34 (64.71%), Query Frame = 2
Query:  608 IKIADSGLAREINSRP-PFTEYVLTRWYRAPEVL 706
            IK+AD GLAR        FT  V+T WYRAPE+L
Sbjct:  141 IKLADFGLARAFGVPVRTFTHEVVTLWYRAPEIL 174          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: MDE3_SCHPO (Sporulation protein kinase mde3 OS=Schizosaccharomyces pombe GN=mde3 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.250e-26
Identity = 53/142 (37.32%), Postives = 89/142 (62.68%), Query Frame = 1
Query:  199 ERYKLIKEVGDGTFGSVWRAISKQSG---EVVAIKKMKK--KYYSWEECVNLREVKSLRKMS-HPNIVKLKEVIREN-DILYFVFEYMECSLYQLMKDRE-KCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSK 600
            +RY + +++GDG+FG+V+ A  K+     E VA+KK+K   K     E + LRE  +LRK+S HP ++ L E   +    ++ V E+M+C+L+QL K R+ + F++    N   Q+  G+ ++H+ G+ HRD+KPEN+LV +
Sbjct:   19 DRYLVKQKLGDGSFGTVYLAQRKEKNGLYETVAVKKLKNSSKPKPKHELLKLRESLALRKISKHPCLIDLLETFMDPYRNIFLVMEFMDCNLFQLFKRRQGRLFTKETAFNILLQIISGIEHIHKHGFMHRDIKPENILVKR 160          

HSP 2 Score: 47.3654 bits (111), Expect = 1.250e-26
Identity = 22/34 (64.71%), Postives = 25/34 (73.53%), Query Frame = 2
Query:  605 TIKIADSGLAREINSRPPFTEYVLTRWYRAPEVL 706
            +IK+ D GLAR   S  P TEYV TRWYRAPE+L
Sbjct:  171 SIKLGDFGLARPSVSSDPLTEYVSTRWYRAPELL 204          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: CDKL4_MOUSE (Cyclin-dependent kinase-like 4 OS=Mus musculus GN=Cdkl4 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.135e-26
Identity = 47/136 (34.56%), Postives = 86/136 (63.24%), Query Frame = 1
Query:  196 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKK-MKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECSLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSK 600
            ME+Y+ + ++G+G++G V++  +K SG+VVAIKK ++ +       + LRE++ L+++ HPN+V L EV R    ++ VFEY + +L   ++      S+  +++  +Q  Q L + H+    HRD+KPEN+L++K
Sbjct:    1 MEKYEKLAKIGEGSYGVVFKCRNKSSGQVVAIKKFVESEDDRVVRKIALREIRMLKQLKHPNLVNLIEVFRRKRKMHLVFEYCDHTLLNELERNPNGVSDGVIKSVLWQTLQALNFCHKHNCIHRDVKPENILITK 136          

HSP 2 Score: 43.1282 bits (100), Expect = 2.135e-26
Identity = 32/88 (36.36%), Postives = 41/88 (46.59%), Query Frame = 2
Query:  608 IKIADSGLAREINSRPPFTEYVLTRWYRAPEVLPPDIPAHLQS*FLGQRRLSWPNLLLPAPLFPGTPGTQSK*SNLVVYKAIPTTGNL 871
            IKI D G AR +     +T+YV TRWYRAPE+L  D   +  S  +      +  LL   PL+PG            +Y  I T G L
Sbjct:  140 IKICDFGFARILIPGDAYTDYVATRWYRAPELLVGD-TKYGSSVDVWAVGCVFAELLTGQPLWPGKSDVDQ------LYLIIRTLGKL 220          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: MPK15_ORYSJ (Mitogen-activated protein kinase 15 OS=Oryza sativa subsp. japonica GN=MPK15 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.089e-26
Identity = 53/140 (37.86%), Postives = 84/140 (60.00%), Query Frame = 1
Query:  202 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSHPNIVKLKEVI-----RENDILYFVFEYMECSLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKD 603
            RYK+ + +G G++G V  A+   +GE VAIKK+   +    +    LRE+K LR + HP+IV++K ++     RE   +Y VFE ME  L+Q++K  +    E   + + +Q+ +GL Y+H    FHRDLKP+N+L + D
Sbjct:   12 RYKIEEVIGKGSYGVVCSALDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPE-HYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD 150          

HSP 2 Score: 43.1282 bits (100), Expect = 6.089e-26
Identity = 27/69 (39.13%), Postives = 35/69 (50.72%), Query Frame = 2
Query:  608 IKIADSGLAREINSRPP----FTEYVLTRWYRAPEVLPPDIPAHLQS*FLGQRRLSWPNLLLPAPLFPG 802
            +KI D GLAR   S  P    +T+YV TRWYRAPE+       +  +  +      +  LL   PLFPG
Sbjct:  153 LKICDFGLARVAFSDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPG 221          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: CDC22_MEDSA (Cell division control protein 2 homolog 2 OS=Medicago sativa GN=CDC2B PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.149e-26
Identity = 47/140 (33.57%), Postives = 87/140 (62.14%), Query Frame = 1
Query:  196 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECSLYQLM-KDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDHN 609
            ME+Y+ ++++G+GT+G V++A  + + E +A+KK++ ++         +RE+  L++M H NIV+L++V+     LY VFEY++  L + M    E    + +++ + +Q+  G+AY H     HRDLKP+NLL+ +  N
Sbjct:    1 MEQYEKVEKIGEGTYGVVYKARDRATNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSEKRLYLVFEYLDLDLKKFMDSSPEFAKDQRQIKMFLYQILCGIAYCHSHRVLHRDLKPQNLLIDRSSN 140          

HSP 2 Score: 38.1206 bits (87), Expect = 6.149e-26
Identity = 28/77 (36.36%), Postives = 34/77 (44.16%), Query Frame = 2
Query:  608 IKIADSGLAREINSRP-PFTEYVLTRWYRAPEVLPPDIPAHLQS*FLGQRRLSWP-----------NLLLPAPLFPG 802
            +K+AD GLAR        FT  V+T WYRAPE+L            LG R  S P            ++   PLFPG
Sbjct:  142 VKLADFGLARAFGIPVRTFTHEVVTLWYRAPEIL------------LGSRHYSTPVDVWSVGCIFAEMINQRPLFPG 206          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: CDC2_MAIZE (Cell division control protein 2 homolog OS=Zea mays GN=CDC2 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.003e-26
Identity = 47/140 (33.57%), Postives = 88/140 (62.86%), Query Frame = 1
Query:  196 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECSLYQLMKD-REKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDHN 609
            ME+Y+ ++++G+GT+G V++A+ K + E +A+KK++ ++         +RE+  L++M+H NIV+L +V+     +Y VFEY++  L + M    E   +   ++++ +Q+  G+AY H     HRDLKP+NLL+ +  N
Sbjct:    1 MEQYEKVEKIGEGTYGVVYKALDKATNETIALKKIRLEQEDEGVPSTAIREISLLKEMNHGNIVRLHDVVHSEKRIYLVFEYLDLDLKKFMDSCPEFAKNPTLIKSYLYQILHGVAYCHSHRVLHRDLKPQNLLIDRRTN 140          

HSP 2 Score: 37.3502 bits (85), Expect = 8.003e-26
Identity = 28/77 (36.36%), Postives = 35/77 (45.45%), Query Frame = 2
Query:  608 IKIADSGLAREINSRP-PFTEYVLTRWYRAPEVLPPDIPAHLQS*FLGQRRLSWP-----------NLLLPAPLFPG 802
            +K+AD GLAR        FT  V+T WYRAPE+L            LG R+ S P            ++   PLFPG
Sbjct:  142 LKLADFGLARAFGIPVRTFTHEVVTLWYRAPEIL------------LGARQYSTPVDVWSVGCIFAEMVNQKPLFPG 206          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: CDK5_DICDI (Cell division protein kinase 5 homolog OS=Dictyostelium discoideum GN=cdk5 PE=2 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.042e-25
Identity = 49/138 (35.51%), Postives = 93/138 (67.39%), Query Frame = 1
Query:  196 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEE---CVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECSLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSK 600
            ME+Y  I+++G+GT+G V++A ++++GE+VA+K+++    S +E   C  +RE+  L+++ HPNIV+L +VI     L  VFEY++  L + + +     S+  ++++ +Q+ +G+A+ H     HRDLKP+NLL+++
Sbjct:    1 MEKYSKIEKLGEGTYGIVYKAKNRETGEIVALKRIRLD--SEDEGVPCTAIREISLLKELKHPNIVRLHDVIHTERKLTLVFEYLDQDLKKYLDECGGEISKPTIKSFMYQLLKGVAFCHDHRVLHRDLKPQNLLINR 136          

HSP 2 Score: 34.6538 bits (78), Expect = 1.042e-25
Identity = 26/82 (31.71%), Postives = 37/82 (45.12%), Query Frame = 2
Query:  596 QKTTIKIADSGLAREINSRP-PFTEYVLTRWYRAPEVLPPDIPAHLQS*FLGQRRLSWP-----------NLLLPAPLFPGT 805
            +K  +K+AD GLAR        ++  V+T WYRAP+VL            +G R+ S P            +    PLFPG+
Sbjct:  136 RKGELKLADFGLARAFGIPVRTYSHEVVTLWYRAPDVL------------MGSRKYSTPIDIWSAGCIFAEMASGRPLFPGS 205          
The following BLAST results are available for this feature:
BLAST of DY271197 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PIT1_SCHPO4.936e-3643.88Sporulation protein kinase pit1 OS=Schizosaccharom... [more]
MOK_HUMAN3.041e-3238.13MAPK/MAK/MRK overlapping kinase OS=Homo sapiens GN... [more]
MOK_MOUSE1.931e-3138.85MAPK/MAK/MRK overlapping kinase OS=Mus musculus GN... [more]
CDK2_XENLA5.730e-2738.41Cell division protein kinase 2 OS=Xenopus laevis G... [more]
MDE3_SCHPO1.250e-2637.32Sporulation protein kinase mde3 OS=Schizosaccharom... [more]
CDKL4_MOUSE2.135e-2634.56Cyclin-dependent kinase-like 4 OS=Mus musculus GN=... [more]
MPK15_ORYSJ6.089e-2637.86Mitogen-activated protein kinase 15 OS=Oryza sativ... [more]
CDC22_MEDSA6.149e-2633.57Cell division control protein 2 homolog 2 OS=Medic... [more]
CDC2_MAIZE8.003e-2633.57Cell division control protein 2 homolog OS=Zea may... [more]
CDK5_DICDI1.042e-2535.51Cell division protein kinase 5 homolog OS=Dictyost... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAP9YC24FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271197 ID=DY271197; Name=DY271197; organism=Citrus clementina; type=EST; length=900bp
GAAAACTTCTTGGTTTGTTCTCTCGCATATAGCTACGCAAAATTAATGTT
GGACTCAGCTGGACCAGTGGAACATTTTGTTTAAATTTAACAGTTTTTTC
TAGCAATTATCTTGGTACAATAAATGTCATATAACTTCAAAGGTTCTTAC
ACTTTTCTTGAATAAAGAAAGAGCTGTTTCTGTTCCACAAGGAAAATGGA
AAGGTACAAGTTAATTAAGGAAGTTGGTGATGGAACATTTGGGAGTGTCT
GGCGAGCTATTAGTAAGCAGTCTGGTGAAGTTGTTGCAATTAAAAAAATG
AAGAAAAAATATTATTCCTGGGAGGAGTGTGTCAATTTGAGAGAAGTTAA
GTCGCTACGGAAAATGAGTCATCCAAACATTGTGAAGCTTAAGGAAGTCA
TCCGGGAAAATGATATCTTGTACTTTGTTTTTGAATACATGGAATGTAGC
CTTTACCAACTTATGAAAGACAGAGAGAAGTGTTTCTCTGAAGCTGAAGT
CAGAAATTGGTGTTTCCAAGTTTTCCAAGGTCTGGCTTACATGCATCAGC
GGGGATATTTTCATCGTGACCTTAAGCCTGAGAACTTGCTTGTTTCAAAA
GACCACAATTAAAATTGCTGATTCTGGCCTTGCCCGTGAAATTAACTCAC
GTCCACCGTTCACGGAATACGTCCTCACCCGATGGTATCGAGCTCCTGAA
GTGCTGCCTCCAGACATACCTGCACACCTCCAAAGTTGATTCCTCGGGCA
ACGGAGGCTATCATGGCCAAATTTATTACTCCCCGCCCCTCTTTTCCCGG
GTACCCCCGGAACCCAATCTAAATGATCAAACCTCGTAGTGTATAAAGCC
ATCCCCACCACGGGAAATCTGGGACAGCAAGACACCCCTCCCGCGGTGAA
back to top