DY271197

Overview
NameDY271197
Unique NameDY271197
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length900
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: ERK2_DICDI (Extracellular signal-regulated kinase 2 OS=Dictyostelium discoideum GN=erkB PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 5.040e-25
Identity = 48/140 (34.29%), Postives = 86/140 (61.43%), Query Frame = 1
Query:  196 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECV-NLREVKSLRKM-SHPNIVKLKEVIR-END-ILYFVFEYMECSLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKD 603
            + +Y++++++G G +G VW+AI K++ + VA+KK+   + +  +     RE+  L+++  H NI+KL  VI+ +ND  +Y VFE+ME  L+ ++  R K   E   +   +Q+ + L YMH     HRD+KP NLL++ +
Sbjct:   11 LRKYEVLQKIGKGAYGIVWKAIDKKTKQTVALKKIFDAFQNATDAQRTFREIMFLQELHGHENIIKLLNVIKADNDRDIYLVFEHMETDLHAVI--RAKILEEIHKQYTIYQLLKALKYMHSANVLHRDIKPSNLLLNSE 148          

HSP 2 Score: 46.595 bits (109), Expect = 5.040e-25
Identity = 23/40 (57.50%), Postives = 26/40 (65.00%), Query Frame = 2
Query:  608 IKIADSGLAREINS-------RPPFTEYVLTRWYRAPEVL 706
            +K+AD GLAR I S        P  TEYV TRWYRAPE+L
Sbjct:  151 VKVADFGLARSITSLESIAEANPVLTEYVATRWYRAPEIL 190          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: CC2H3_TRYBB (Cell division control protein 2 homolog 3 OS=Trypanosoma brucei brucei GN=CRK3 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 5.057e-25
Identity = 49/140 (35.00%), Postives = 89/140 (63.57%), Query Frame = 1
Query:  193 KMERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECSLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDHN 609
            + +RY  +  +G+GT+G V+RA+ + +G++VA+KK++  +         LREV  L+++ HPNIV L +VI  +  LY +FEY++  L + ++ R   F+   ++   +Q+ +GL++ H+    HRDLKP N+LV+ D++
Sbjct:   19 QFDRYNRMDILGEGTYGVVYRAVDRATGQIVALKKVRLDRTDEGIPQTALREVSILQEIHHPNIVNLLDVICADGKLYLIFEYVDHDLKKALEKRGGAFTGTTLKKIIYQLLEGLSFCHRHRIVHRDLKPANILVTTDNS 158          

HSP 2 Score: 36.1946 bits (82), Expect = 5.057e-25
Identity = 18/35 (51.43%), Postives = 23/35 (65.71%), Query Frame = 2
Query:  605 TIKIADSGLAREIN-SRPPFTEYVLTRWYRAPEVL 706
            ++KIAD GLAR        +T  V+T WYRAPE+L
Sbjct:  158 SVKIADFGLARAFQIPMHTYTHEVVTLWYRAPEIL 192          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: MPK4_ORYSJ (Mitogen-activated protein kinase 4 OS=Oryza sativa subsp. japonica GN=MPK4 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 6.560e-25
Identity = 53/145 (36.55%), Postives = 84/145 (57.93%), Query Frame = 1
Query:  202 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSHPNIVKLKEVI-----RENDILYFVFEYMECSLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDHN*NC 618
            +Y  IK +G G +G V  +I++ + E VAIKK+   + +  + +  LRE+K LR + H N++ LK+++     R    +Y V+E M+  L+Q++K  +   S    + + FQ+ +GL Y+H  G  HRDLKP NLLV    N NC
Sbjct:   31 KYVPIKPIGRGAYGIVCSSINRATNEKVAIKKINNVFDNRVDALRTLRELKLLRHLRHENVIALKDIMMPVHRRSFKDVYLVYELMDTDLHQIIKSSQP-LSNDHCQYFLFQLLRGLKYLHSAGILHRDLKPGNLLV----NANC 170          

HSP 2 Score: 45.4394 bits (106), Expect = 6.560e-25
Identity = 22/34 (64.71%), Postives = 27/34 (79.41%), Query Frame = 2
Query:  608 IKIADSGLAREINSRPPF-TEYVLTRWYRAPEVL 706
            +KI D GLAR  N++  F TEYV+TRWYRAPE+L
Sbjct:  172 LKICDFGLARTNNTKGQFMTEYVVTRWYRAPELL 205          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: CDKL4_HUMAN (Cyclin-dependent kinase-like 4 OS=Homo sapiens GN=CDKL4 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.581e-25
Identity = 45/136 (33.09%), Postives = 85/136 (62.50%), Query Frame = 1
Query:  196 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKK-MKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECSLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSK 600
            ME+Y+ + + G+G++G V++  +K SG+VVA+KK ++ +     + + LRE++ L+++ HPN+V L EV R    ++ VFEY + +L   ++      ++  +++  +Q  Q L + H     HRD+KPEN+L++K
Sbjct:    1 MEKYEKLAKTGEGSYGVVFKCRNKTSGQVVAVKKFVESEDDPVVKKIALREIRMLKQLKHPNLVNLIEVFRRKRKMHLVFEYCDHTLLNELERNPNGVADGVIKSVLWQTLQALNFCHIHNCIHRDIKPENILITK 136          

HSP 2 Score: 41.9726 bits (97), Expect = 6.581e-25
Identity = 31/88 (35.23%), Postives = 41/88 (46.59%), Query Frame = 2
Query:  608 IKIADSGLAREINSRPPFTEYVLTRWYRAPEVLPPDIPAHLQS*FLGQRRLSWPNLLLPAPLFPGTPGTQSK*SNLVVYKAIPTTGNL 871
            IKI D G A+ +     +T+YV TRWYRAPE+L  D   +  S  +      +  LL   PL+PG            +Y  I T G L
Sbjct:  140 IKICDFGFAQILIPGDAYTDYVATRWYRAPELLVGD-TQYGSSVDIWAIGCVFAELLTGQPLWPGKSDVDQ------LYLIIRTLGKL 220          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: CDK2_CARAU (Cell division protein kinase 2 OS=Carassius auratus GN=cdk2 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.588e-25
Identity = 52/136 (38.24%), Postives = 87/136 (63.97%), Query Frame = 1
Query:  196 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYS-WEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECSLYQLMKDREKC-FSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVS 597
            ME ++ ++++G+GT+G V++A +K +GE VA+KK++    +       +RE+  L++++HPNIVKL +VI   + LY VFE++   L + M        S   V+++ FQ+ QGLA+ H     HRDLKP+NLL++
Sbjct:    1 MESFQKVEKIGEGTYGVVYKAKNKVTGETVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLHDVIHTENKLYLVFEFLHQDLKRFMDSSTVTGISLPLVKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLIN 136          

HSP 2 Score: 34.6538 bits (78), Expect = 6.588e-25
Identity = 18/34 (52.94%), Postives = 22/34 (64.71%), Query Frame = 2
Query:  608 IKIADSGLAREINSRP-PFTEYVLTRWYRAPEVL 706
            IK+AD GLAR        +T  V+T WYRAPE+L
Sbjct:  141 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 174          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: CDKA1_ORYSJ (Cyclin-dependent kinase A-1 OS=Oryza sativa subsp. japonica GN=CDKA-1 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.590e-25
Identity = 49/140 (35.00%), Postives = 86/140 (61.43%), Query Frame = 1
Query:  196 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECSLYQLMKD-REKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDHN 609
            ME+Y+  +++G+GT+G V+RA  K + E +A+KK++ ++         +RE+  L++M H NIV+L +VI     +Y VFEY++  L + M    E   +   ++++ +Q+ +G+AY H     HRDLKP+NLL+ +  N
Sbjct:    1 MEQYEKEEKIGEGTYGVVYRARDKVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMHHGNIVRLHDVIHSEKRIYLVFEYLDLDLKKFMDSCPEFAKNPTLIKSYLYQILRGVAYCHSHRVLHRDLKPQNLLIDRRTN 140          

HSP 2 Score: 37.7354 bits (86), Expect = 6.590e-25
Identity = 28/77 (36.36%), Postives = 35/77 (45.45%), Query Frame = 2
Query:  608 IKIADSGLAREINSRP-PFTEYVLTRWYRAPEVLPPDIPAHLQS*FLGQRRLSWP-----------NLLLPAPLFPG 802
            +K+AD GLAR        FT  V+T WYRAPE+L            LG R+ S P            ++   PLFPG
Sbjct:  142 LKLADFGLARAFGIPVRTFTHEVVTLWYRAPEIL------------LGSRQYSTPVDMWSVGCIFAEMVNQKPLFPG 206          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: MPK16_ARATH (Mitogen-activated protein kinase 16 OS=Arabidopsis thaliana GN=MPK16 PE=2 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 8.472e-25
Identity = 52/140 (37.14%), Postives = 83/140 (59.29%), Query Frame = 1
Query:  202 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSHPNIVKLKEVI-----RENDILYFVFEYMECSLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKD 603
            RY++ + +G G++G V  A    +GE VAIKK+   +    +    LRE+K LR + HP+IV++K ++     RE   +Y VFE ME  L+Q++K  +    E   + + +Q+ +GL Y+H    FHRDLKP+N+L + D
Sbjct:   24 RYRIEEVIGKGSYGVVCSAYDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFRDIYVVFELMESDLHQVIKANDDLTPE-HYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD 162          

HSP 2 Score: 41.9726 bits (97), Expect = 8.472e-25
Identity = 26/69 (37.68%), Postives = 35/69 (50.72%), Query Frame = 2
Query:  608 IKIADSGLAREINSRPP----FTEYVLTRWYRAPEVLPPDIPAHLQS*FLGQRRLSWPNLLLPAPLFPG 802
            +KI D GLAR   +  P    +T+YV TRWYRAPE+       +  +  +      +  LL   PLFPG
Sbjct:  165 LKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPG 233          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: CDKD2_ARATH (Cyclin-dependent kinase D-2 OS=Arabidopsis thaliana GN=CDKD-2 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.547e-25
Identity = 49/139 (35.25%), Postives = 91/139 (65.47%), Query Frame = 1
Query:  196 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN---LREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECSLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKD 603
            ++RY   + +G+GT+G V++A   ++G+ VA+KK++    + +E VN   LRE+K L++++HP+IV+L +    +  L+ VFEYM+  L  +++DR    S  +++++     +GLAY H++   HRD+KP NLL+ ++
Sbjct:   10 VDRYLRRQILGEGTYGVVYKATDTKTGKTVAVKKIRLG--NQKEGVNFTALREIKLLKELNHPHIVELIDAFPHDGSLHLVFEYMQTDLEAVIRDRNIFLSPGDIKSYMLMTLKGLAYCHKKWVLHRDMKPNNLLIGEN 146          

HSP 2 Score: 34.6538 bits (78), Expect = 8.547e-25
Identity = 18/34 (52.94%), Postives = 21/34 (61.76%), Query Frame = 2
Query:  608 IKIADSGLAREINS-RPPFTEYVLTRWYRAPEVL 706
            +K+AD GLAR   S    FT  V   WYRAPE+L
Sbjct:  149 LKLADFGLARLFGSPNRRFTHQVFATWYRAPELL 182          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: CDC2_BOVIN (Cell division control protein 2 homolog OS=Bos taurus GN=CDC2 PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 8.575e-25
Identity = 50/138 (36.23%), Postives = 89/138 (64.49%), Query Frame = 1
Query:  196 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN---LREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECSLYQLMKDRE--KCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLV 594
            ME Y  I+++G+GT+G V++   K +G+VVA+KK++ +  S EE V    +RE+  L+++ HPNIV L++V+ ++  LY +FE++   L + +      +    + V+++ +Q+ QG+ + H R   HRDLKP+NLL+
Sbjct:    1 MEDYTKIEKIGEGTYGVVYKGRHKTTGQVVAMKKIRLE--SEEEGVPSTAIREISLLKELRHPNIVSLQDVLMQDSRLYLIFEFLSMDLKKYLDSIPPGQFMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLI 136          

HSP 2 Score: 36.5798 bits (83), Expect = 8.575e-25
Identity = 20/37 (54.05%), Postives = 24/37 (64.86%), Query Frame = 2
Query:  599 KTTIKIADSGLAREINSR-PPFTEYVLTRWYRAPEVL 706
            K TIK+AD GLAR        +T  V+T WYR+PEVL
Sbjct:  139 KGTIKLADFGLARAFGIPIRVYTHEVVTLWYRSPEVL 175          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: CDC2_VIGAC (Cell division control protein 2 homolog OS=Vigna aconitifolia GN=CDC2 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.577e-25
Identity = 47/140 (33.57%), Postives = 87/140 (62.14%), Query Frame = 1
Query:  196 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECSLYQLMKDREKCFSE-AEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDHN 609
            ME+Y+ ++++G+GT+G V++A  + + E +A+KK++ ++         +RE+  L++M H NIV+L++V+     LY VFEY++  L + M    +   +  +V+ + +Q+  G+AY H     HRDLKP+NLL+ +  N
Sbjct:    1 MEQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFVKDPRQVKMFLYQILCGIAYCHSHRVLHRDLKPQNLLIDRRTN 140          

HSP 2 Score: 37.3502 bits (85), Expect = 8.577e-25
Identity = 28/78 (35.90%), Postives = 35/78 (44.87%), Query Frame = 2
Query:  605 TIKIADSGLAREINSRP-PFTEYVLTRWYRAPEVLPPDIPAHLQS*FLGQRRLSWP-----------NLLLPAPLFPG 802
            ++K+AD GLAR        FT  V+T WYRAPE+L            LG R  S P            ++   PLFPG
Sbjct:  141 SLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEIL------------LGSRHYSTPVDVWSVGCIFAEMVNRRPLFPG 206          
The following BLAST results are available for this feature:
BLAST of DY271197 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ERK2_DICDI5.040e-2534.29Extracellular signal-regulated kinase 2 OS=Dictyos... [more]
CC2H3_TRYBB5.057e-2535.00Cell division control protein 2 homolog 3 OS=Trypa... [more]
MPK4_ORYSJ6.560e-2536.55Mitogen-activated protein kinase 4 OS=Oryza sativa... [more]
CDKL4_HUMAN6.581e-2533.09Cyclin-dependent kinase-like 4 OS=Homo sapiens GN=... [more]
CDK2_CARAU6.588e-2538.24Cell division protein kinase 2 OS=Carassius auratu... [more]
CDKA1_ORYSJ6.590e-2535.00Cyclin-dependent kinase A-1 OS=Oryza sativa subsp.... [more]
MPK16_ARATH8.472e-2537.14Mitogen-activated protein kinase 16 OS=Arabidopsis... [more]
CDKD2_ARATH8.547e-2535.25Cyclin-dependent kinase D-2 OS=Arabidopsis thalian... [more]
CDC2_BOVIN8.575e-2536.23Cell division control protein 2 homolog OS=Bos tau... [more]
CDC2_VIGAC8.577e-2533.57Cell division control protein 2 homolog OS=Vigna a... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YC24FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271197 ID=DY271197; Name=DY271197; organism=Citrus clementina; type=EST; length=900bp
GAAAACTTCTTGGTTTGTTCTCTCGCATATAGCTACGCAAAATTAATGTT
GGACTCAGCTGGACCAGTGGAACATTTTGTTTAAATTTAACAGTTTTTTC
TAGCAATTATCTTGGTACAATAAATGTCATATAACTTCAAAGGTTCTTAC
ACTTTTCTTGAATAAAGAAAGAGCTGTTTCTGTTCCACAAGGAAAATGGA
AAGGTACAAGTTAATTAAGGAAGTTGGTGATGGAACATTTGGGAGTGTCT
GGCGAGCTATTAGTAAGCAGTCTGGTGAAGTTGTTGCAATTAAAAAAATG
AAGAAAAAATATTATTCCTGGGAGGAGTGTGTCAATTTGAGAGAAGTTAA
GTCGCTACGGAAAATGAGTCATCCAAACATTGTGAAGCTTAAGGAAGTCA
TCCGGGAAAATGATATCTTGTACTTTGTTTTTGAATACATGGAATGTAGC
CTTTACCAACTTATGAAAGACAGAGAGAAGTGTTTCTCTGAAGCTGAAGT
CAGAAATTGGTGTTTCCAAGTTTTCCAAGGTCTGGCTTACATGCATCAGC
GGGGATATTTTCATCGTGACCTTAAGCCTGAGAACTTGCTTGTTTCAAAA
GACCACAATTAAAATTGCTGATTCTGGCCTTGCCCGTGAAATTAACTCAC
GTCCACCGTTCACGGAATACGTCCTCACCCGATGGTATCGAGCTCCTGAA
GTGCTGCCTCCAGACATACCTGCACACCTCCAAAGTTGATTCCTCGGGCA
ACGGAGGCTATCATGGCCAAATTTATTACTCCCCGCCCCTCTTTTCCCGG
GTACCCCCGGAACCCAATCTAAATGATCAAACCTCGTAGTGTATAAAGCC
ATCCCCACCACGGGAAATCTGGGACAGCAAGACACCCCTCCCGCGGTGAA
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