DY271197

Overview
NameDY271197
Unique NameDY271197
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length900
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: NTF3_TOBAC (Mitogen-activated protein kinase homolog NTF3 OS=Nicotiana tabacum GN=NTF3 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.147e-24
Identity = 51/145 (35.17%), Postives = 84/145 (57.93%), Query Frame = 1
Query:  202 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSHPNIVKLKEVI-----RENDILYFVFEYMECSLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDHN*NC 618
            +Y  IK +G G +G V  ++++++ E VAIKK+   + +  + +  LRE+K LR + H N++ LK+V+     R    +Y V+E M+  L+Q++K  +   S    + + FQ+ +GL Y+H     HRDLKP NLL+    N NC
Sbjct:   31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRIDALRTLRELKLLRHLRHENVIALKDVMMPIHRRSFKDVYLVYELMDTDLHQIIKSSQT-LSNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLI----NANC 170          

HSP 2 Score: 43.8986 bits (102), Expect = 4.147e-24
Identity = 21/34 (61.76%), Postives = 26/34 (76.47%), Query Frame = 2
Query:  608 IKIADSGLAREINSRPPF-TEYVLTRWYRAPEVL 706
            +KI D GLAR  + +  F TEYV+TRWYRAPE+L
Sbjct:  172 LKICDFGLARTSSGKDQFMTEYVVTRWYRAPELL 205          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: CDC2_RAT (Cell division control protein 2 homolog OS=Rattus norvegicus GN=Cdc2 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 4.166e-24
Identity = 48/138 (34.78%), Postives = 89/138 (64.49%), Query Frame = 1
Query:  196 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN---LREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECSLYQLMKDRE--KCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLV 594
            ME Y  I+++G+GT+G V++   + +G++VA+KK++ +  S EE V    +RE+  L+++ HPNIV L++V+ ++  LY +FE++   L + +      +    + V+++ +Q+ QG+ + H R   HRDLKP+NLL+
Sbjct:    1 MEDYIKIEKIGEGTYGVVYKGRHRTTGQIVAMKKIRLE--SEEEGVPSTAIREISLLKELRHPNIVSLQDVLMQDSRLYLIFEFLSMDLKKYLDSIPPGQFMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLI 136          

HSP 2 Score: 36.5798 bits (83), Expect = 4.166e-24
Identity = 20/37 (54.05%), Postives = 24/37 (64.86%), Query Frame = 2
Query:  599 KTTIKIADSGLAREINSR-PPFTEYVLTRWYRAPEVL 706
            K TIK+AD GLAR        +T  V+T WYR+PEVL
Sbjct:  139 KGTIKLADFGLARAFGIPIRVYTHEVVTLWYRSPEVL 175          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: CDKG1_ORYSJ (Cyclin-dependent kinase G-1 OS=Oryza sativa subsp. japonica GN=CDKG-1 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 5.337e-24
Identity = 50/140 (35.71%), Postives = 87/140 (62.14%), Query Frame = 1
Query:  190 RKMERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSHPNIVKLKEVI---RENDILYFVFEYMECSLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVS 597
            R ++ ++ +  + +GT+G V+R   K++GE+VA+KK+K +K        +LRE+  L    HP+IV++KEV+    + DI + V EYME  L  +M+  ++ +S++EV+    Q+ +G+ Y+H     HRDLK  NLL++
Sbjct:  344 RSVDEFERLNTINEGTYGVVFRVRDKRTGEIVALKKVKMEKEREGFPLTSLREMNILLSFHHPSIVEVKEVVVGSNDRDI-FMVMEYMEHDLKGVMETMKQPYSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLN 482          

HSP 2 Score: 38.891 bits (89), Expect = 5.337e-24
Identity = 18/34 (52.94%), Postives = 25/34 (73.53%), Query Frame = 2
Query:  608 IKIADSGLAREINSR-PPFTEYVLTRWYRAPEVL 706
            +KI D GL+R+  S   P+T+ V+T WYRAPE+L
Sbjct:  487 LKICDFGLSRQYGSPLKPYTQLVVTLWYRAPELL 520          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: CDKG1_ORYSI (Cyclin-dependent kinase G-1 OS=Oryza sativa subsp. indica GN=CDKG-1 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 5.337e-24
Identity = 50/140 (35.71%), Postives = 87/140 (62.14%), Query Frame = 1
Query:  190 RKMERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSHPNIVKLKEVI---RENDILYFVFEYMECSLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVS 597
            R ++ ++ +  + +GT+G V+R   K++GE+VA+KK+K +K        +LRE+  L    HP+IV++KEV+    + DI + V EYME  L  +M+  ++ +S++EV+    Q+ +G+ Y+H     HRDLK  NLL++
Sbjct:  344 RSVDEFERLNTINEGTYGVVFRVRDKRTGEIVALKKVKMEKEREGFPLTSLREMNILLSFHHPSIVEVKEVVVGSNDRDI-FMVMEYMEHDLKGVMETMKQPYSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLN 482          

HSP 2 Score: 38.891 bits (89), Expect = 5.337e-24
Identity = 18/34 (52.94%), Postives = 25/34 (73.53%), Query Frame = 2
Query:  608 IKIADSGLAREINSR-PPFTEYVLTRWYRAPEVL 706
            +KI D GL+R+  S   P+T+ V+T WYRAPE+L
Sbjct:  487 LKICDFGLSRQYGSPLKPYTQLVVTLWYRAPELL 520          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: MPK16_ORYSJ (Mitogen-activated protein kinase 16 OS=Oryza sativa subsp. japonica GN=MPK16 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.366e-24
Identity = 50/140 (35.71%), Postives = 83/140 (59.29%), Query Frame = 1
Query:  202 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSHPNIVKLKEVI-----RENDILYFVFEYMECSLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKD 603
            RY++ + VG G++G V  A+   +G  VAIKK+   +    +    LRE+K LR + HP+IV++K ++     RE   +Y +FE ME  L+Q++K  +    E   + + +Q+ +G+ Y+H    FHRDLKP+N+L + D
Sbjct:   21 RYEVTEVVGKGSYGVVAAAVDTHTGGRVAIKKINDVFEHISDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFRDIYIIFELMESDLHQVIKANDDLTPEHH-QFFLYQLLRGMKYIHAASVFHRDLKPKNILANAD 159          

HSP 2 Score: 41.9726 bits (97), Expect = 5.366e-24
Identity = 25/69 (36.23%), Postives = 35/69 (50.72%), Query Frame = 2
Query:  608 IKIADSGLAREINSRPP----FTEYVLTRWYRAPEVLPPDIPAHLQS*FLGQRRLSWPNLLLPAPLFPG 802
            +KI D GLAR      P    +T+YV TRWYRAPE+       +  +  +      +  +L+  PLFPG
Sbjct:  162 VKICDFGLARVSFDDTPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSVGCIFAEMLMGKPLFPG 230          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: MPK1_ARATH (Mitogen-activated protein kinase 1 OS=Arabidopsis thaliana GN=MPK1 PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 5.396e-24
Identity = 53/146 (36.30%), Postives = 82/146 (56.16%), Query Frame = 1
Query:  202 RYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN-LREVKSLRKMSHPNIVKLKEVIRE------NDILYFVFEYMECSLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDHN*NC 618
            +Y  IK +G G +G V  +++  + E VAIKK+   Y +  + +  LRE+K LR + H N++ LK+V+         D+ Y V+E M+  L+Q++K  +   S    + + FQ+ +GL Y+H     HRDLKP NLLV    N NC
Sbjct:   31 KYMPIKPIGRGAYGVVCSSVNSDTNEKVAIKKIHNVYENRIDALRTLRELKLLRHLRHENVIALKDVMMPIHKMSFKDV-YLVYELMDTDLHQIIKSSQ-VLSNDHCQYFLFQLLRGLKYIHSANILHRDLKPGNLLV----NANC 170          

HSP 2 Score: 45.8246 bits (107), Expect = 5.396e-24
Identity = 22/34 (64.71%), Postives = 27/34 (79.41%), Query Frame = 2
Query:  608 IKIADSGLAREINSRPPF-TEYVLTRWYRAPEVL 706
            +KI D GLAR  N++  F TEYV+TRWYRAPE+L
Sbjct:  172 LKICDFGLARASNTKGQFMTEYVVTRWYRAPELL 205          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: CDKL1_MOUSE (Cyclin-dependent kinase-like 1 OS=Mus musculus GN=Cdkl1 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 5.402e-24
Identity = 45/136 (33.09%), Postives = 87/136 (63.97%), Query Frame = 1
Query:  196 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKK-MKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECSLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSK 600
            ME+Y+ I ++G+G++G V++  ++ +G++VAIK+ ++ +     + + LRE++ L+++ HPN+V L EV R    L+ VFEY + ++   +   ++   E  V+N  +Q  Q + + H+    HRD+KPEN+L++K
Sbjct:    1 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKRFLETEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEPLVKNITWQTLQAVNFCHKHNCIHRDVKPENILITK 136          

HSP 2 Score: 38.5058 bits (88), Expect = 5.402e-24
Identity = 18/41 (43.90%), Postives = 27/41 (65.85%), Query Frame = 2
Query:  596 QKTTIKIADSGLAREINSRPPF-TEYVLTRWYRAPEVLPPD 715
            +++ IK+ D G AR +     + T+YV TRWYR+PE+L  D
Sbjct:  136 KQSAIKLCDFGFARLLTGPGDYYTDYVATRWYRSPELLVGD 176          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: CDC2_CHICK (Cell division control protein 2 homolog OS=Gallus gallus GN=CDC2 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.419e-24
Identity = 50/138 (36.23%), Postives = 89/138 (64.49%), Query Frame = 1
Query:  196 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVN---LREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECSLYQLMKD--REKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLV 594
            ME Y  I+++G+GT+G V++   K +G+VVA+KK++ +  S EE V    +RE+  L+++ HPNIV L++V+ ++  LY +FE++   L + +      +    + V+++ +Q+ QG+ + H R   HRDLKP+NLL+
Sbjct:    1 MEDYTKIEKIGEGTYGVVYKGRHKTTGQVVAMKKIRLE--SEEEGVPSTAIREISLLKELHHPNIVCLQDVLMQDARLYLIFEFLSMDLKKYLDTIPSGQYLDRSRVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLI 136          

HSP 2 Score: 34.6538 bits (78), Expect = 5.419e-24
Identity = 19/37 (51.35%), Postives = 23/37 (62.16%), Query Frame = 2
Query:  599 KTTIKIADSGLAREINSRPP-FTEYVLTRWYRAPEVL 706
            K  IK+AD GLAR        +T  V+T WYR+PEVL
Sbjct:  139 KGVIKLADFGLARAFGIPVRVYTHEVVTLWYRSPEVL 175          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: CD11B_HUMAN (Cell division protein kinase 11B OS=Homo sapiens GN=CDK11B PE=1 SV=3)

HSP 1 Score: 94.3597 bits (233), Expect = 6.929e-24
Identity = 48/139 (34.53%), Postives = 83/139 (59.71%), Query Frame = 1
Query:  190 RKMERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSHPNIVKLKEVI--RENDILYFVFEYMECSLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVS 597
            R +E ++ +  + +GT+G V+RA  K++ E+VA+K++K +K        +LRE+ ++ K  HPNIV ++E++     D +Y V  Y+E  L  LM+  ++ F   EV+    Q+ +G+ ++H     HRDLK  NLL+S
Sbjct:  433 RSVEEFQCLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINTILKAQHPNIVTVREIVVGSNMDKIYIVMNYVEHDLKSLMETMKQPFLPGEVKTLMIQLLRGVKHLHDNWILHRDLKTSNLLLS 571          

HSP 2 Score: 37.7354 bits (86), Expect = 6.929e-24
Identity = 28/77 (36.36%), Postives = 35/77 (45.45%), Query Frame = 2
Query:  608 IKIADSGLAREINSR-PPFTEYVLTRWYRAPEVLPPDIPAHLQS*FLGQRRLS-----------WPNLLLPAPLFPG 802
            +K+ D GLARE  S    +T  V+T WYRAPE+L            LG +  S           +  LL   PLFPG
Sbjct:  576 LKVGDFGLAREYGSPLKAYTPVVVTLWYRAPELL------------LGAKEYSTAVDMWSVGCIFGELLTQKPLFPG 640          
BLAST of DY271197 vs. ExPASy Swiss-Prot
Match: CTK1_SCHPO (CTD kinase subunit alpha OS=Schizosaccharomyces pombe GN=lsk1 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 6.962e-24
Identity = 47/134 (35.07%), Postives = 89/134 (66.42%), Query Frame = 1
Query:  205 YKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMK-KKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECSLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKD 603
            Y+ I ++G+GT+G V++AI+  +G++VA+K+++ ++         +REVK L+++ H NIV+L E++ E   +Y VFEYM+  L  ++ + +  F+   +++   Q+F+ LAY+H RG  HRD+K  N+L++ +
Sbjct:  277 YEKIDQIGEGTYGKVYKAINTVTGDLVALKRIRLEQEKDGFPITTVREVKILQRLRHKNIVRLLEIMVEKSSVYMVFEYMDHDLTGVLLNSQLHFTPGNIKHLSKQIFEALAYLHHRGVLHRDIKGSNILLNNN 410          

HSP 2 Score: 30.0314 bits (66), Expect = 6.962e-24
Identity = 16/35 (45.71%), Postives = 21/35 (60.00%), Query Frame = 2
Query:  608 IKIADSGLAREINSRPP--FTEYVLTRWYRAPEVL 706
            +K AD GLAR   S     +T  V+T W+R PE+L
Sbjct:  413 LKFADFGLARFNTSSKSANYTNRVITLWFRPPELL 447          
The following BLAST results are available for this feature:
BLAST of DY271197 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NTF3_TOBAC4.147e-2435.17Mitogen-activated protein kinase homolog NTF3 OS=N... [more]
CDC2_RAT4.166e-2434.78Cell division control protein 2 homolog OS=Rattus ... [more]
CDKG1_ORYSJ5.337e-2435.71Cyclin-dependent kinase G-1 OS=Oryza sativa subsp.... [more]
CDKG1_ORYSI5.337e-2435.71Cyclin-dependent kinase G-1 OS=Oryza sativa subsp.... [more]
MPK16_ORYSJ5.366e-2435.71Mitogen-activated protein kinase 16 OS=Oryza sativ... [more]
MPK1_ARATH5.396e-2436.30Mitogen-activated protein kinase 1 OS=Arabidopsis ... [more]
CDKL1_MOUSE5.402e-2433.09Cyclin-dependent kinase-like 1 OS=Mus musculus GN=... [more]
CDC2_CHICK5.419e-2436.23Cell division control protein 2 homolog OS=Gallus ... [more]
CD11B_HUMAN6.929e-2434.53Cell division protein kinase 11B OS=Homo sapiens G... [more]
CTK1_SCHPO6.962e-2435.07CTD kinase subunit alpha OS=Schizosaccharomyces po... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YC24FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271197 ID=DY271197; Name=DY271197; organism=Citrus clementina; type=EST; length=900bp
GAAAACTTCTTGGTTTGTTCTCTCGCATATAGCTACGCAAAATTAATGTT
GGACTCAGCTGGACCAGTGGAACATTTTGTTTAAATTTAACAGTTTTTTC
TAGCAATTATCTTGGTACAATAAATGTCATATAACTTCAAAGGTTCTTAC
ACTTTTCTTGAATAAAGAAAGAGCTGTTTCTGTTCCACAAGGAAAATGGA
AAGGTACAAGTTAATTAAGGAAGTTGGTGATGGAACATTTGGGAGTGTCT
GGCGAGCTATTAGTAAGCAGTCTGGTGAAGTTGTTGCAATTAAAAAAATG
AAGAAAAAATATTATTCCTGGGAGGAGTGTGTCAATTTGAGAGAAGTTAA
GTCGCTACGGAAAATGAGTCATCCAAACATTGTGAAGCTTAAGGAAGTCA
TCCGGGAAAATGATATCTTGTACTTTGTTTTTGAATACATGGAATGTAGC
CTTTACCAACTTATGAAAGACAGAGAGAAGTGTTTCTCTGAAGCTGAAGT
CAGAAATTGGTGTTTCCAAGTTTTCCAAGGTCTGGCTTACATGCATCAGC
GGGGATATTTTCATCGTGACCTTAAGCCTGAGAACTTGCTTGTTTCAAAA
GACCACAATTAAAATTGCTGATTCTGGCCTTGCCCGTGAAATTAACTCAC
GTCCACCGTTCACGGAATACGTCCTCACCCGATGGTATCGAGCTCCTGAA
GTGCTGCCTCCAGACATACCTGCACACCTCCAAAGTTGATTCCTCGGGCA
ACGGAGGCTATCATGGCCAAATTTATTACTCCCCGCCCCTCTTTTCCCGG
GTACCCCCGGAACCCAATCTAAATGATCAAACCTCGTAGTGTATAAAGCC
ATCCCCACCACGGGAAATCTGGGACAGCAAGACACCCCTCCCGCGGTGAA
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