DY271199
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271199 vs. ExPASy Swiss-Prot
Match: SODE_CAEEL (Extracellular superoxide dismutase [Cu-Zn] OS=Caenorhabditis elegans GN=sod-4 PE=1 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 1.001e-31 Identity = 73/156 (46.79%), Postives = 93/156 (59.62%), Query Frame = 3 Query: 33 VLRSHSTMVKAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIG 500 V+R+ + + KA A TE + GT+ F Q G ++GS+SGL G HGFH+H GDT NGC+S G H+NP HG P+D NRH +V D+ LSG SIIGR+VV+H DDLG+G + SKTTGNAG R+ACG IG Sbjct: 21 VIRARAYIFKAEAGKIPTELI-GTIDFDQSGSF-LKLNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGGHYNPHKLSHGAPDDSNRHIGDLGNIESPASGDTLISVSDSLASLSGQYSIIGRSVVIHEKTDDLGRGTSDQSKTTGNAGSRLACGTIG 174
BLAST of DY271199 vs. ExPASy Swiss-Prot
Match: SODC_NPVOP (Putative superoxide dismutase [Cu-Zn] OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=SOD PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.308e-31 Identity = 71/151 (47.02%), Postives = 89/151 (58.94%), Query Frame = 3 Query: 57 VKAVAVLGGTEGVKGTVSFSQEG-DGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTAT-FTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 503 +KA+ ++ G G + F Q D P +++G L L G HGFHVH GDT+NGC S G HFNP + HG P+ RH T + DN I L GP SI+GR++VVH D DDLG G H LSKTTGN+GGR+ CGIIG+ Sbjct: 1 MKAICIVAGE--ASGRIYFKQGAPDEPVSITGYLLNLPRGLHGFHVHEFGDTSNGCTSAGEHFNPTRQRHGAPDAAERHVGDLGNVRSAGCTALTAIHMSDNVITLFGPLSILGRSLVVHTDRDDLGLGEHPLSKTTGNSGGRLGCGIIGV 149
BLAST of DY271199 vs. ExPASy Swiss-Prot
Match: CCS_HUMAN (Copper chaperone for superoxide dismutase OS=Homo sapiens GN=CCS PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.221e-30 Identity = 66/145 (45.52%), Postives = 85/145 (58.62%), Query Frame = 3 Query: 63 AVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGII 497 AVA+LGG V+G V F Q + G++ GL+PG HG HVH GD TN C S G HFNP G HG P+D +RH A F + D Q+ + +IGR++++ DDLG+GGH LSK TGN+G R+ACGII Sbjct: 89 AVAILGGPGTVQGVVRFLQLTPERCLIEGTIDGLEPGLHGLHVHQYGDLTNNCNSCGNHFNPDGASHGGPQDSDRHRGDLGNVRADADGRAIFRMEDEQLKVW---DVIGRSLIIDEGEDDLGRGGHPLSKITGNSGERLACGII 230
BLAST of DY271199 vs. ExPASy Swiss-Prot
Match: CCS_RAT (Copper chaperone for superoxide dismutase OS=Rattus norvegicus GN=Ccs PE=1 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.207e-30 Identity = 66/145 (45.52%), Postives = 85/145 (58.62%), Query Frame = 3 Query: 63 AVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGII 497 AVA++ G+ V+G V F Q + G++ GL+PG HG HVH GD T C S G HFNP G HG P+D +RH ATF + D Q+ + +IGR++VV DDLG+GGH LSK TGN+G R+ACGII Sbjct: 89 AVAIMEGSGTVQGVVRFLQLSSELCLIEGTIDGLEPGLHGLHVHQYGDLTKDCSSCGDHFNPDGASHGGPQDTDRHRGDLGNVHAEASGRATFRIEDKQLKVW---DVIGRSLVVDEGEDDLGRGGHPLSKVTGNSGKRLACGII 230
BLAST of DY271199 vs. ExPASy Swiss-Prot
Match: SODE_DIRIM (Extracellular superoxide dismutase [Cu-Zn] OS=Dirofilaria immitis PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.176e-30 Identity = 69/152 (45.39%), Postives = 88/152 (57.89%), Query Frame = 3 Query: 60 KAVAVLGGTEGVKGTVSFSQEGDGP-TTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKG---GHELSKTTGNAGGRVACGIIGL 503 KAVAVL ++ V G + F Q TT+ G+++GL PG HGFH+H G NGC S H+NP K HG P + +H A ++ N I LSGP S+IGR++VVHA+PDDLGKG E S TGNAG R+ C IIG+ Sbjct: 41 KAVAVLK-SDTVNGIIYFQQNNRASATTIYGTINGLTPGLHGFHIHQYGIKANGCTSAAAHYNPFEKTHGRPTNNIKHIGDLRNIKAGADGVANVNIISNHIQLSGPLSVIGRSLVVHANPDDLGKGNGDAREESLKTGNAGSRIVCSIIGI 191
BLAST of DY271199 vs. ExPASy Swiss-Prot
Match: CCS_PIG (Copper chaperone for superoxide dismutase OS=Sus scrofa GN=CCS PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.176e-30 Identity = 66/145 (45.52%), Postives = 84/145 (57.93%), Query Frame = 3 Query: 63 AVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGII 497 AVA+LGG+ V+G V F Q + G++ GLKPG HG HVH GD T C S G HFNP G HG P+D +RH A F + D + + +IGR++V+ DDLG+GGH LSK TGN+G R+ACGII Sbjct: 89 AVAILGGSGPVQGVVRFLQLTPERCLIEGTIDGLKPGLHGLHVHQFGDLTRNCNSCGDHFNPDGMSHGGPQDSDRHRGDLGNVCADADGRAVFRMEDELLKVW---DVIGRSLVIDEGEDDLGRGGHPLSKITGNSGERLACGII 230
BLAST of DY271199 vs. ExPASy Swiss-Prot
Match: CCS_MOUSE (Copper chaperone for superoxide dismutase OS=Mus musculus GN=Ccs PE=1 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.176e-30 Identity = 65/145 (44.83%), Postives = 84/145 (57.93%), Query Frame = 3 Query: 63 AVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGII 497 AVA+L G ++G V F Q + G++ GL+PG HG HVH GD T C S G HFNP G HG P+D +RH ATF + D Q+ + +IGR++V+ DDLG+GGH LSK TGN+G R+ACGII Sbjct: 89 AVAILEGCGSIQGVVRFLQLSSELCLIEGTIDGLEPGLHGLHVHQYGDLTRDCNSCGDHFNPDGASHGGPQDTDRHRGDLGNVRAEAGGRATFRIEDKQLKVW---DVIGRSLVIDEGEDDLGRGGHPLSKITGNSGKRLACGII 230
BLAST of DY271199 vs. ExPASy Swiss-Prot
Match: SODC_PBCV1 (Superoxide dismutase [Cu-Zn] OS=Paramecium bursaria Chlorella virus 1 GN=A245R PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 9.373e-30 Identity = 72/149 (48.32%), Postives = 87/149 (58.39%), Query Frame = 3 Query: 57 VKAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPG-PHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIG 500 V A+AVL G VKGTV F +E +S +SGLKP HGFHVH GD T+GC S HFNP G HG P+ + RH A ++ D+ I L G +IIGRA+VVHAD DDLG GG+ S TGNAG R+ C +IG Sbjct: 35 VSAIAVLEGP--VKGTVRFVEESS-KVKISVDISGLKPNRKHGFHVHEAGDLTDGCTSACAHFNPFGTAHGGPDSKIRHVGDLGNILADKNGKAKYSFYDSMIKLRGKCNIIGRAIVVHADTDDLGLGGNAESLKTGNAGKRIGCAVIG 180
BLAST of DY271199 vs. ExPASy Swiss-Prot
Match: SODC_SCHPO (Superoxide dismutase [Cu-Zn] OS=Schizosaccharomyces pombe GN=sod1 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.075e-29 Identity = 72/152 (47.37%), Postives = 83/152 (54.61%), Query Frame = 3 Query: 54 MVKAVAVLGGTEGVKGTVSFSQ-EGDGPTTVSGSLSGLKPGP-HGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 503 MV+AVAVL G V G V+F Q + + +V L G GFH+H GD TNGC S GPHFNP GK HG RH T D+ I L G NSIIGR +V+HA DDLGKG E S TGNAG R ACG+IG+ Sbjct: 1 MVRAVAVLRGDSKVSGVVTFEQVDQNSQVSVIVDLVGNDANAKRGFHIHQFGDNTNGCTSAGPHFNPEGKTHGDRTAAVRHVGDLGNLESDAQGNIKTTFSDSVISLFGANSIIGRTIVIHAGEDDLGKGTSEESLKTGNAGARNACGVIGI 152
BLAST of DY271199 vs. ExPASy Swiss-Prot
Match: SODC_LAMCR (Superoxide dismutase [Cu-Zn] (Fragment) OS=Lampanyctus crocodilus GN=sod1 PE=1 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 1.267e-26 Identity = 68/146 (46.58%), Postives = 81/146 (55.48%), Query Frame = 3 Query: 54 MVKAVAVLGGTEG-VKGTVSFSQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVA 485 MVKAV VL GT G V GTV F QE D P ++G + GL PG HGFHVHA GD TN H P D++RH A + D + L+GP SIIGR +V+H DDLGKGG++ S TGNAGGR+A Sbjct: 1 MVKAVCVLKGTTGEVTGTVYFEQESDSAPVKLTGQIIGLAPGLHGFHVHAFGDNTNXXXXXXXXXXXXXXTHAGPTDKDRHVGDLGN-------VAKIDITDKMLTLNGPLSIIGRTMVIHEKADDLGKGGNDESLKTGNAGGRMA 139 The following BLAST results are available for this feature:
BLAST of DY271199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 143
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271199 ID=DY271199; Name=DY271199; organism=Citrus clementina; type=EST; length=660bpback to top |