DY271199
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271199 vs. ExPASy Swiss-Prot
Match: SODC1_SOLLC (Superoxide dismutase [Cu-Zn] 1 OS=Solanum lycopersicum GN=SODCC.1 PE=2 SV=2) HSP 1 Score: 241.121 bits (614), Expect = 3.770e-63 Identity = 115/152 (75.66%), Postives = 126/152 (82.89%), Query Frame = 3 Query: 54 MVKAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 509 MVKAVAVL +EGV GT F+Q G PTTV+G++SGLKPG HGFHVHALGDTTNGCMSTGPH+NPAGKEHG PEDE RHA TA+FT+ D QIPL+GP SIIGRAVVVHADPDDLGKGGHELSK+TGNAGGR+ACGIIGLQG Sbjct: 1 MVKAVAVLNSSEGVSGTYLFTQVGVAPTTVNGNISGLKPGLHGFHVHALGDTTNGCMSTGPHYNPAGKEHGAPEDEVRHAGDLGNITVGEDGTASFTITDKQIPLTGPQSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRIACGIIGLQG 152
BLAST of DY271199 vs. ExPASy Swiss-Prot
Match: SODC1_BRAJU (Superoxide dismutase [Cu-Zn] 1 OS=Brassica juncea GN=SODCC1 PE=2 SV=3) HSP 1 Score: 240.736 bits (613), Expect = 4.924e-63 Identity = 114/152 (75.00%), Postives = 125/152 (82.24%), Query Frame = 3 Query: 54 MVKAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 509 M K V VL +EGVKGT+ F+QEG+G TTV+G++SGLKPG HGFHVHALGDTTNGCMSTGPHFNP GK HG PED NRHA TATFT+ D+QIPL GPNSI+GRAVVVHA+PDDLGKGGHELS TTGNAGGRVACGIIGLQG Sbjct: 1 MGKGVRVLNSSEGVKGTIFFTQEGNGTTTVTGTVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPEGKTHGAPEDANRHAGDLGNITVGDDGTATFTITDSQIPLDGPNSIVGRAVVVHAEPDDLGKGGHELSLTTGNAGGRVACGIIGLQG 152
BLAST of DY271199 vs. ExPASy Swiss-Prot
Match: SODC_BRAOC (Superoxide dismutase [Cu-Zn] OS=Brassica oleracea var. capitata GN=SODCC PE=1 SV=2) HSP 1 Score: 239.58 bits (610), Expect = 1.097e-62 Identity = 112/152 (73.68%), Postives = 125/152 (82.24%), Query Frame = 3 Query: 54 MVKAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 509 M K VAVL +EGVKGT+ F+ EG+G TTV+G++SGL+PG HGFHVHALGD TNGCMSTGPHFNP GK HG PED NRHA TATFT+ D+QIPLSGPNSI+GRA+VVHADPDDLGKGGHELS +TGNAGGRVACGIIGLQG Sbjct: 1 MAKGVAVLNSSEGVKGTIFFTHEGNGATTVTGTVSGLRPGLHGFHVHALGDNTNGCMSTGPHFNPDGKTHGAPEDANRHAGDLGNIIVGDDGTATFTITDSQIPLSGPNSIVGRAIVVHADPDDLGKGGHELSLSTGNAGGRVACGIIGLQG 152
BLAST of DY271199 vs. ExPASy Swiss-Prot
Match: SODC_PINSY (Superoxide dismutase [Cu-Zn] OS=Pinus sylvestris GN=SODCC PE=2 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 2.444e-62 Identity = 109/152 (71.71%), Postives = 124/152 (81.58%), Query Frame = 3 Query: 54 MVKAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 509 ++KAV VL G VKG V F+QEGDGPTTV+G +SGL PG HGFHVHALGDTTNGCMSTGPHFNP GKEHG P D+NRHA T F++ D+QIPLSGP+SI+GRAVVVHADPDDLGKGGHELSK+TGNAGGR+ACG++GLQG Sbjct: 3 LLKAVVVLNGAADVKGVVQFTQEGDGPTTVTGKISGLSPGLHGFHVHALGDTTNGCMSTGPHFNPLGKEHGAPTDDNRHAGDLGNVTVGTDGTVEFSITDSQIPLSGPHSIVGRAVVVHADPDDLGKGGHELSKSTGNAGGRLACGVVGLQG 154
BLAST of DY271199 vs. ExPASy Swiss-Prot
Match: SODC2_BRAJU (Superoxide dismutase [Cu-Zn] 2 OS=Brassica juncea GN=SODCC2 PE=2 SV=3) HSP 1 Score: 238.039 bits (606), Expect = 3.192e-62 Identity = 115/152 (75.66%), Postives = 125/152 (82.24%), Query Frame = 3 Query: 54 MVKAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 509 M K VAVL +EGVKGT+ F+QEG+G TTV+G++SGLKPG HGFHVHALGDTTNG MSTGPHFNP GK+HG PED NRHA TATFT+ D QIPLSGPNSI+GRAVVVHADPD LGKGGHELS TTGNAGGRVACGIIGLQG Sbjct: 1 MGKGVAVLNSSEGVKGTIFFAQEGEGKTTVTGTVSGLKPGLHGFHVHALGDTTNGSMSTGPHFNPDGKQHGAPEDANRHAGDLGNIIVGDDGTATFTITDCQIPLSGPNSIVGRAVVVHADPDVLGKGGHELSLTTGNAGGRVACGIIGLQG 152
BLAST of DY271199 vs. ExPASy Swiss-Prot
Match: SODC_PANGI (Superoxide dismutase [Cu-Zn] OS=Panax ginseng GN=SODCC PE=2 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 3.529e-61 Identity = 112/152 (73.68%), Postives = 121/152 (79.61%), Query Frame = 3 Query: 54 MVKAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 509 MVKAV VL G+ GV G + F+QE DGPTTV+G LSGL PG HGFHVHALGDTTNGC+STGPH+NPA KEHG PEDE RHA TA FT+VD QIPL G SIIGRAVVVHADPDDLGKGGHELSK+TGNAGGR+ACG IGLQG Sbjct: 1 MVKAVTVLSGSGGVSGVIHFTQEEDGPTTVTGKLSGLAPGLHGFHVHALGDTTNGCLSTGPHYNPANKEHGAPEDETRHAGDLGNVTVGEDGTAEFTIVDKQIPLIGSGSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRLACGFIGLQG 152
BLAST of DY271199 vs. ExPASy Swiss-Prot
Match: SODCP_SOLCS (Superoxide dismutase [Cu-Zn], chloroplastic OS=Solidago canadensis var. scabra GN=SODCP PE=2 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 2.074e-53 Identity = 96/148 (64.86%), Postives = 113/148 (76.35%), Query Frame = 3 Query: 60 KAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 503 KAVAVL GT V+G V+ +QE DGPTTV+ ++GL PGPHGFH+H GDTTNGC+STGPHFNP G HG PEDENRHA A T+VDNQIPL+GPN+++GRA VVH DDLGKGGHELS +TGNAGGR+ACG++GL Sbjct: 70 KAVAVLKGTSSVEGVVTLTQEEDGPTTVNVKITGLTPGPHGFHLHEFGDTTNGCISTGPHFNPNGNTHGAPEDENRHAGDLGNIIANADGVAEATIVDNQIPLTGPNAVVGRAFVVHELADDLGKGGHELSLSTGNAGGRLACGVVGL 217
BLAST of DY271199 vs. ExPASy Swiss-Prot
Match: SODCP_SPIOL (Superoxide dismutase [Cu-Zn], chloroplastic OS=Spinacia oleracea GN=SODCP PE=1 SV=2) HSP 1 Score: 207.608 bits (527), Expect = 4.619e-53 Identity = 98/148 (66.22%), Postives = 112/148 (75.68%), Query Frame = 3 Query: 60 KAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 503 KAVAVL GT V+G V+ +QE DGPTTV+ +SGL PG HGFH+H GDTTNGCMSTGPHFNP K HG PEDE RHA A T+VDNQIPL+GPNS++GRA+VVH DDLGKGGHELS TTGNAGGR+ACG++GL Sbjct: 72 KAVAVLKGTSNVEGVVTLTQEDDGPTTVNVRISGLAPGKHGFHLHEFGDTTNGCMSTGPHFNPDKKTHGAPEDEVRHAGDLGNIVANTDGVAEATIVDNQIPLTGPNSVVGRALVVHELEDDLGKGGHELSPTTGNAGGRLACGVVGL 219
BLAST of DY271199 vs. ExPASy Swiss-Prot
Match: SODCP_ARATH (Superoxide dismutase [Cu-Zn], chloroplastic OS=Arabidopsis thaliana GN=SODCP PE=1 SV=2) HSP 1 Score: 203.371 bits (516), Expect = 8.712e-52 Identity = 99/165 (60.00%), Postives = 114/165 (69.09%), Query Frame = 3 Query: 9 FIFLPPRGVLRSHSTMVKAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 503 F P L S KAVAVL GT V+G V+ +Q+ GPTTV+ ++GL PGPHGFH+H GDTTNGC+STGPHFNP HG PEDE RHA A T+VDNQIPL+GPNS++GRA VVH DDLGKGGHELS TTGNAGGR+ACG+IGL Sbjct: 49 FAVKAPSKALTVVSAAKKAVAVLKGTSDVEGVVTLTQDDSGPTTVNVRITGLTPGPHGFHLHEFGDTTNGCISTGPHFNPNNMTHGAPEDECRHAGDLGNINANADGVAETTIVDNQIPLTGPNSVVGRAFVVHELKDDLGKGGHELSLTTGNAGGRLACGVIGL 213
BLAST of DY271199 vs. ExPASy Swiss-Prot
Match: SODCP_VITVI (Superoxide dismutase [Cu-Zn], chloroplastic OS=Vitis vinifera GN=SODCP PE=2 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.486e-51 Identity = 97/148 (65.54%), Postives = 110/148 (74.32%), Query Frame = 3 Query: 60 KAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 503 KAVAVL GT V+G V+ SQE DGPTTVS ++GL PG HGFH+H GDTTNGCMSTG HFNP G HG PED+ RHA A T+VD QIPLSGPN++IGRA+VVH DDLGKGGHELS TTGNAGGR+ACG++GL Sbjct: 62 KAVAVLKGTSSVEGVVTLSQEDDGPTTVSVRITGLTPGNHGFHLHEFGDTTNGCMSTGAHFNPNGMTHGAPEDDVRHAGDLGNIIANAEGVAEATIVDTQIPLSGPNAVIGRALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 209 The following BLAST results are available for this feature:
BLAST of DY271199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 143
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271199 ID=DY271199; Name=DY271199; organism=Citrus clementina; type=EST; length=660bpback to top |