DY271199
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY271199 vs. ExPASy Swiss-Prot
Match: SODC_PANTR (Superoxide dismutase [Cu-Zn] OS=Pan troglodytes GN=SOD1 PE=2 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 3.553e-37 Identity = 77/149 (51.68%), Postives = 94/149 (63.09%), Query Frame = 3 Query: 60 KAVAVLGGTEGVKGTVSFSQ-EGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 503 KAV VL G V+G ++F Q E +GP V GS+ GL G HGFHVH GD T GC S GPHFNP ++HG P+DE RH A ++ D+ I LSG + IIGR +VVH DDLGKGG+E S TGNAG R+ACG+IG+ Sbjct: 4 KAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 152
BLAST of DY271199 vs. ExPASy Swiss-Prot
Match: SODC_HUMAN (Superoxide dismutase [Cu-Zn] OS=Homo sapiens GN=SOD1 PE=1 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 3.553e-37 Identity = 77/149 (51.68%), Postives = 94/149 (63.09%), Query Frame = 3 Query: 60 KAVAVLGGTEGVKGTVSFSQ-EGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 503 KAV VL G V+G ++F Q E +GP V GS+ GL G HGFHVH GD T GC S GPHFNP ++HG P+DE RH A ++ D+ I LSG + IIGR +VVH DDLGKGG+E S TGNAG R+ACG+IG+ Sbjct: 4 KAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 152
BLAST of DY271199 vs. ExPASy Swiss-Prot
Match: SODC_ASPFU (Superoxide dismutase [Cu-Zn] OS=Aspergillus fumigatus GN=sodC PE=2 SV=3) HSP 1 Score: 154.451 bits (389), Expect = 4.641e-37 Identity = 80/152 (52.63%), Postives = 94/152 (61.84%), Query Frame = 3 Query: 54 MVKAVAVLGGTEGVKGTVSFSQ-EGDGPTTVSGSLSGLKPGP-HGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 503 MVKAVAVL G + GTV+F Q + + PTTVS ++ G P GFHVH GD TNGC S GPHFNP GK HG PED RH A + D I L G S++GR +VVHA DDLG+GG+E SK TGNAG R ACG+IG+ Sbjct: 1 MVKAVAVLRGDSKITGTVTFEQADENSPTTVSWNIKGNDPNAKRGFHVHQFGDNTNGCTSAGPHFNPYGKTHGAPEDSERHVGDLGNFETDAEGNAVGSKQDKLIKLIGAESVLGRTLVVHAGTDDLGRGGNEESKKTGNAGARPACGVIGI 152
BLAST of DY271199 vs. ExPASy Swiss-Prot
Match: SODC_RABIT (Superoxide dismutase [Cu-Zn] OS=Oryctolagus cuniculus GN=SOD1 PE=1 SV=3) HSP 1 Score: 153.68 bits (387), Expect = 7.916e-37 Identity = 74/148 (50.00%), Postives = 90/148 (60.81%), Query Frame = 3 Query: 60 KAVAVLGGTEGVKGTVSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 503 KAV VL G V+ T+ F Q+G GP V G ++GL G H FHVH GD GC S GPHFNP K+HG P+DE RH A + D+ I LSG S+IGR +VVH DDLGKGG++ S TGNAG R+ACG+IG+ Sbjct: 4 KAVCVLKGDGPVEATIHFEQKGTGPVVVKGRITGLTEGLHEFHVHQFGDNRQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVTAGSNGVADVLIEDSVISLSGDMSVIGRTLVVHEKEDDLGKGGNDESTKTGNAGSRLACGVIGI 151
BLAST of DY271199 vs. ExPASy Swiss-Prot
Match: SODC_CORMI (Superoxide dismutase [Cu-Zn] OS=Cordyceps militaris GN=SOD1 PE=2 SV=3) HSP 1 Score: 153.68 bits (387), Expect = 7.916e-37 Identity = 78/152 (51.32%), Postives = 94/152 (61.84%), Query Frame = 3 Query: 54 MVKAVAVLGGTEGVKGTVSFSQEGDG-PTTVSGSLSGLKPGPH-GFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 503 MVKAV VL G V GTV+F QE + PTT++ ++G P GFH+H GD TNGC S GPHFNP GK HG P D RH A +V D+ + L GP+S++GR VVVH DDLGKGG+E S TGNAG R ACG+IG+ Sbjct: 1 MVKAVCVLRGDAKVAGTVTFEQESESAPTTITWDITGNDPNAERGFHIHTFGDNTNGCTSAGPHFNPHGKTHGAPTDAARHVGDLGNIKTDGQGNAKGSVQDSHVKLIGPHSVVGRTVVVHGGTDDLGKGGNEESLKTGNAGPRPACGVIGV 152
BLAST of DY271199 vs. ExPASy Swiss-Prot
Match: SODC_PONPY (Superoxide dismutase [Cu-Zn] OS=Pongo pygmaeus GN=SOD1 PE=2 SV=3) HSP 1 Score: 152.91 bits (385), Expect = 1.350e-36 Identity = 78/150 (52.00%), Postives = 95/150 (63.33%), Query Frame = 3 Query: 60 KAVAVLGGTEG-VKGTVSFSQ-EGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 503 KAV VL G VKG ++F Q E +GP V GS+ GL G HGFHVH GD T GC S GPHFNP ++HG P+DE RH A+ ++ D+ I LSG + IIGR +VVH DDLGKGG+E S TGNAG R+ACG+IG+ Sbjct: 4 KAVCVLKGDNSPVKGIINFEQKERNGPVKVWGSIEGLTEGLHGFHVHEFGDNTVGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVASVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 153
BLAST of DY271199 vs. ExPASy Swiss-Prot
Match: SODC1_DEBHA (Superoxide dismutase [Cu-Zn] 1 OS=Debaryomyces hansenii GN=SOD1 PE=1 SV=4) HSP 1 Score: 152.14 bits (383), Expect = 2.303e-36 Identity = 80/152 (52.63%), Postives = 92/152 (60.53%), Query Frame = 3 Query: 54 MVKAVAVLGGTEGVKGTVSFSQEGDG-PTTVSGSLSGLKPGP-HGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 503 M KAVAVL G V G V+F Q + PTT++ +SG GFHVH GD TNGC S GPHFNP KEHG PED+NRH A + D + L G NSI+GR VV+HA DDLGKGG+ SK TGNAG R ACG+IGL Sbjct: 1 MAKAVAVLRGDSKVSGVVNFEQSSESDPTTITWEISGNDANALRGFHVHTFGDNTNGCTSAGPHFNPFTKEHGAPEDDNRHVGDLGNVTTDTSGVAKGSKQDLFVKLIGQNSILGRTVVIHAGTDDLGKGGNAESKKTGNAGARPACGVIGL 152
BLAST of DY271199 vs. ExPASy Swiss-Prot
Match: SODC_CLAPU (Superoxide dismutase [Cu-Zn] OS=Claviceps purpurea GN=SOD1 PE=3 SV=3) HSP 1 Score: 151.754 bits (382), Expect = 3.008e-36 Identity = 79/152 (51.97%), Postives = 93/152 (61.18%), Query Frame = 3 Query: 54 MVKAVAVLGGTEGVKGTVSFSQEGDG-PTTVSGSLSGLKPGP-HGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 503 MVKAVAVL G V GTV F QE + PTT++ ++G GFH+H GD TNGC S GPHFNP GK HG P DE RH A +V D + L GP+S+IGR VV+HA DDLGKG +E S TGNAG R ACG+IG+ Sbjct: 1 MVKAVAVLRGDAKVGGTVVFEQESESAPTTITWDITGNDANAKRGFHIHTFGDNTNGCTSAGPHFNPHGKTHGAPTDEARHVGDLGNLETDGQGNAKGSVKDEHVKLIGPHSVIGRTVVIHAGTDDLGKGDNEESLKTGNAGPRPACGVIGI 152
BLAST of DY271199 vs. ExPASy Swiss-Prot
Match: SODC_ASPOR (Superoxide dismutase [Cu-Zn] OS=Aspergillus oryzae GN=sodC PE=3 SV=3) HSP 1 Score: 151.754 bits (382), Expect = 3.008e-36 Identity = 78/152 (51.32%), Postives = 93/152 (61.18%), Query Frame = 3 Query: 54 MVKAVAVLGGTEGVKGTVSFSQ-EGDGPTTVSGSLSGLKPGPH-GFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 503 MVKAVAVL G + GTV+F Q + + PTTVS +++G FHVH GD TNGC S GPHFNP GKEHG PEDENRH A + D I L G S++GR +V+HA DDLG+ H SK TGNAG R ACG+IG+ Sbjct: 1 MVKAVAVLRGDSKISGTVTFEQADANAPTTVSWNITGHDANAERAFHVHQFGDNTNGCTSAGPHFNPFGKEHGAPEDENRHVGDLGNFKTDAEGNAVGSKQDKLIKLIGAESVLGRTLVIHAGTDDLGRSEHPESKKTGNAGARPACGVIGI 152
BLAST of DY271199 vs. ExPASy Swiss-Prot
Match: SODC_YARLI (Superoxide dismutase [Cu-Zn] OS=Yarrowia lipolytica GN=SOD1 PE=3 SV=3) HSP 1 Score: 151.369 bits (381), Expect = 3.929e-36 Identity = 79/152 (51.97%), Postives = 91/152 (59.87%), Query Frame = 3 Query: 54 MVKAVAVLGGTEGVKGTVSFSQEGD-GPTTVSGSLSGLKPGPH-GFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 503 MVKAVAVL G V GTV+F Q+ + GP TV+ + G P GFHVH GD TNGC S GPHFNP K HG P D RH A + D+ + L+G NSI+GR VV+H DDLGKGGH S TGNAG R ACG+IGL Sbjct: 1 MVKAVAVLRGDSKVSGTVTFEQDSESGPVTVTYDIKGNDPNAERGFHVHEFGDNTNGCTSAGPHFNPFKKNHGGPTDSERHVGDLGNVKTDSEGVAKGVLKDSLLKLTGDNSIVGRTVVIHGGEDDLGKGGHADSLKTGNAGPRPACGVIGL 152 The following BLAST results are available for this feature:
BLAST of DY271199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 143
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271199 ID=DY271199; Name=DY271199; organism=Citrus clementina; type=EST; length=660bpback to top |