DY271204

Overview
NameDY271204
Unique NameDY271204
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length939
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271204 vs. ExPASy Swiss-Prot
Match: IMT1_MESCR (Inositol 4-methyltransferase OS=Mesembryanthemum crystallinum GN=IMT1 PE=1 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 9.898e-62
Identity = 111/241 (46.06%), Postives = 158/241 (65.56%), Query Frame = 1
Query:   13 SMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 735
            S+ P + L  DKVMM  WF L D ILEG + + +A GM  +DY GTD RFN VFN GM   T  V+ K++++Y GF ++  LVDV            +K+ HIKGIN+D+PHVI DA SYPG+EHVGG+M++ IP+ DAI MKW+LH++ DE+C+KIL  CY++L   GK++++ S +P +P+    S   F LD   L+    G+ER+K++F ALA + GF  ++  C   +++VME YK
Sbjct:  124 SLGPLLVLHHDKVMMESWFHLNDYILEGGVPFKRAHGMIQFDYTGTDERFNHVFNQGMAHHTILVMKKLLDNYNGFNDVKVLVDVGGNIGVNVSMIVAKHTHIKGINYDLPHVIADAPSYPGVEHVGGNMFESIPQADAIFMKWVLHDWSDEHCVKILNKCYESLAKGGKIILVESLIPVIPEDNLESHMVFSLDCHTLVHNQGGKERSKEDFEALASKTGFSTVDVICCAYDTWVMELYK 364          
BLAST of DY271204 vs. ExPASy Swiss-Prot
Match: COMT1_MAIZE (Caffeic acid 3-O-methyltransferase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 2.438e-60
Identity = 107/245 (43.67%), Postives = 157/245 (64.08%), Query Frame = 1
Query:    1 QNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 735
            ++GVSM     ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD+RFN VFN GM   +  +  K+++ Y GF+ ++ LVDV            S++PHI G+NFD+PHVI +A  +PG+ HVGGDM+  +P GDAILMKW+LH++ D +C  +L+NCY ALP +GKV+V+   LP   ++T  ++  F +D I L   P G+ER ++EF  LA  AGF G        N++ +EF K
Sbjct:  120 EDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDFYTGFEGVSTLVDVGGGVGATLHAITSRHPHISGVNFDLPHVISEAPPFPGVRHVGGDMFASVPAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHVDMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK 364          
BLAST of DY271204 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 3.184e-60
Identity = 110/246 (44.72%), Postives = 158/246 (64.23%), Query Frame = 1
Query:    1 QNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPE-GDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 735
            ++GVSM     ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD+RFN VFN GM   +  +  K+++ Y GF   + +VDV            S++PHI+GIN+D+PHVI +A  +PG+EHVGGDM+  +P  GDAILMKW+LH++ DE+C ++L+NCY ALP  GKV+V+   LPE  D+T   +  F +D I L   P G+ER ++EF  LA  AGF G        N++ +EF K
Sbjct:  123 EDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDLYTGFDAASTVVDVGGGVGATVAAVVSRHPHIRGINYDLPHVISEAPPFPGVEHVGGDMFASVPRGGDAILMKWILHDWSDEHCARLLKNCYDALPEHGKVVVVECVLPESSDATAREQGVFHVDMIMLAHNPGGKERYEREFRELARAAGFTGFKATYIYANAWAIEFTK 368          
BLAST of DY271204 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 9.264e-60
Identity = 108/245 (44.08%), Postives = 156/245 (63.67%), Query Frame = 1
Query:    1 QNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 735
            ++GVSM     ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD RFN VFN GM   +  +  K++E Y GF+ ++ LVDV            S +P IKGINFD+PHVI +A  +PG++HVGGDM++ +P GDAILMKW+LH++ D +C  +L+NCY ALP +GKV+++   LP   ++   ++  F +D I L   P GRER ++EF  LA  AGF G        N++ +EF K
Sbjct:  118 EDGVSMAALTLMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNRVFNEGMKNHSVIITKKLLEFYTGFEGVSTLVDVGGGIGATLHAITSHHPQIKGINFDLPHVISEAPPFPGVQHVGGDMFKSVPAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIIVECVLPVNTEAVPKAQGVFHVDMIMLAHNPGGRERYEREFHDLAKGAGFSGFKATYIYANAWAIEFIK 362          
BLAST of DY271204 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus GN=COMT1 PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 8.116e-56
Identity = 98/213 (46.01%), Postives = 142/213 (66.67%), Query Frame = 1
Query:    1 QNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERT 639
            ++GVS+ P   +  D+V +  W+ +KD ILEG + ++KA GM  +DY GTD RFN++FN  M   ++ ++ KI+E+Y GF+ +  +VDV            +KYP IKGINFD+PHVI+DA SYPG+EHVGGDM+  IP GDA+ MKW+ H++ DE+C K+L+NCY ALP +G+V+V    LP  PD + +++    +D I L     G+ERT
Sbjct:  101 EDGVSLAPLRLIDQDRVFLESWYYMKDAILEGGIPFHKAHGMTAFDYPGTDPRFNKIFNRAMSDHSTIMMKKILETYNGFEGLKTVVDVGGGTGAILNMIVAKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVNIPNGDAVFMKWICHDWSDEHCAKLLKNCYDALPVNGRVIVAEYILPAYPDQSLSTKGVIHMDCIMLTHFSGGKERT 313          
BLAST of DY271204 vs. ExPASy Swiss-Prot
Match: SMT_COPJA ((S)-scoulerine 9-O-methyltransferase OS=Coptis japonica GN=SMT PE=1 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.287e-50
Identity = 99/246 (40.24%), Postives = 151/246 (61.38%), Query Frame = 1
Query:    1 QNGVSMRPYMNLSLDKVMMPGWFQLKDQILE-GELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 735
            ++ VS+ P +  + DK ++  ++ +KD +LE G + +++  GMDF+ Y G + R N+ FN  M   ++   +++ + YKGF N+  LVDV            +K+PHI+GINF++PHVI DA  YPG+EHV GDM++ +P    IL+KW+LH++DD+  IKIL+NC+KALP +G V+VI   LP+V  +   S ++   D + +   P G+ERT  EF  LA  AGF    F       +VMEF+K
Sbjct:  133 EDKVSVVPMLLFTSDKAVVESFYNIKDVVLEEGVIPFDRTHGMDFFQYAGKEERVNKSFNQAMGAGSTIAFDEVFKVYKGFDNLKELVDVGGGIGTSLSNIVAKHPHIRGINFELPHVIGDAPDYPGVEHVPGDMFEGVPNAQNILLKWVLHDWDDDRSIKILKNCWKALPENGTVIVIEFVLPQVLGNNAESFNALTPDLLMMALNPGGKERTTIEFDGLAKAAGFAETKFFPISQGLHVMEFHK 378          
BLAST of DY271204 vs. ExPASy Swiss-Prot
Match: CHOMT_MEDSA (Isoliquiritigenin 2'-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.779e-45
Identity = 90/226 (39.82%), Postives = 141/226 (62.39%), Query Frame = 1
Query:   64 WFQLKDQILEGELSYNKAL-GMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSY-VMEFYK 735
            W   K+ +++ ++   K + G+  Y+++G D + N++FN  M+   +  + +++E Y GF+ I+ LVDV            SKYP IKGINFD+P VI++A    G+EHVGGDM+  +P+GDA+++K + HN+ DE CI+ L NC+KAL  +GKV+++   LPE P+++E S+    LD +  I +  GRERT+K++  L+  +GF      C   NS  VMEFYK
Sbjct:  148 WMNFKEAVVDEDIDLFKNVHGVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAPPLSGIEHVGGDMFASVPQGDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITV-GGRERTEKQYEKLSKLSGFSKFQVACRAFNSLGVMEFYK 372          
BLAST of DY271204 vs. ExPASy Swiss-Prot
Match: 4OMT_COPJA (3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.489e-33
Identity = 80/226 (35.40%), Postives = 125/226 (55.31%), Query Frame = 1
Query:   13 SMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKG-FQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPND-GKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKG 684
            SM P +     K  M  W  +KD + +   ++ KA+GM  ++YL      +++FN GM G+T  + + ++   +  FQ I  LVDV              +PHIK   FD+PHVI ++   P +E +GGDM++ +P   AI++K +LH+++DE+ IKIL+ C  A+P D GKV++++  L E  D  E S    ILD   L+    G+ERTK+ +  +   AGF G
Sbjct:  110 SMVPMILGMTQKDFMTPWHSMKDGLSDNGTAFEKAMGMTIWEYLEGHPDQSQLFNEGMAGETRLLTSSLISGSRDMFQGIDSLVDVGGGNGTTVKAISDAFPHIKCTLFDLPHVIANSYDLPNIERIGGDMFKSVPSAQAIILKLILHDWNDEDSIKILKQCRNAVPKDGGKVIIVDVALDEESDH-ELSSTRLILDIDMLVN-TGGKERTKEVWEKIVKSAGFSG 333          
BLAST of DY271204 vs. ExPASy Swiss-Prot
Match: 6OMT_COPJA ((RS)-norcoclaurine 6-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.704e-29
Identity = 75/217 (34.56%), Postives = 121/217 (55.76%), Query Frame = 1
Query:   43 DKVMMPGWFQLKDQIL-EGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKG-FQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALP-NDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKG 684
            DK  M  W  LKD +  E   ++ KALG + + Y+      N++FN  M   +  +++ +V+     F  IT LVDV            + +PHIK   +D+PHVI D+  Y  +  V GDM++ IP+ DAI+MK +LH++DD+ CI+IL+ C +A+P   GKV++++  L  V      ++    LD   ++    G+ERT++E+  L  +AG+KG
Sbjct:  115 DKDFMAPWHYLKDGLSGESGTAFEKALGTNIWGYMAEHPEKNQLFNEAMANDSRLIMSALVKECGNIFNGITTLVDVGGGTGTAVRNIANAFPHIKCTVYDLPHVIADSPGYSEVHCVAGDMFKFIPKADAIMMKCILHDWDDKECIEILKRCKEAVPVKGGKVIIVDIVL-NVQSEHPYTKMRLTLDLDMMLN-TGGKERTEEEWKKLIHDAGYKG 329          
BLAST of DY271204 vs. ExPASy Swiss-Prot
Match: 7OMT6_MEDSA (Isoflavone-7-O-methyltransferase 6 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 7.159e-28
Identity = 68/226 (30.09%), Postives = 122/226 (53.98%), Query Frame = 1
Query:   16 MRPYMNLSLDKVMMPGWFQLKDQILEGELS-YNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPND---GKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFK 681
            + P +   LD  +   + +LK  I E +L+ +   LG  F+D+L  +  +N  FN+ M   +  +   + +    F  +  +VDV              +P +K I FD P V+++ S    + +VGGDM+  IP  DA+L+K++LHN+ D++C++IL+ C +A+ ND   GKV +I+  + E  D  + ++   ++D    +   +G+ER ++E+  L IEAGF+
Sbjct:  111 LAPMVECVLDPTLSGSYHELKKWIYEEDLTLFGVTLGSGFWDFLDKNPEYNTSFNDAMASDSKLINLALRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDEKKDENQVTQIKLLMDV--NMACLNGKERNEEEWKKLFIEAGFQ 334          
The following BLAST results are available for this feature:
BLAST of DY271204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
IMT1_MESCR9.898e-6246.06Inositol 4-methyltransferase OS=Mesembryanthemum c... [more]
COMT1_MAIZE2.438e-6043.67Caffeic acid 3-O-methyltransferase OS=Zea mays PE=... [more]
OMT1_ORYSJ3.184e-6044.72Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]
COMT1_SACOF9.264e-6044.08Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]
COMT1_EUCGL8.116e-5646.01Caffeic acid 3-O-methyltransferase (Fragment) OS=E... [more]
SMT_COPJA2.287e-5040.24(S)-scoulerine 9-O-methyltransferase OS=Coptis jap... [more]
CHOMT_MEDSA3.779e-4539.82Isoliquiritigenin 2'-O-methyltransferase OS=Medica... [more]
4OMT_COPJA1.489e-3335.403'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltran... [more]
6OMT_COPJA1.704e-2934.56(RS)-norcoclaurine 6-O-methyltransferase OS=Coptis... [more]
7OMT6_MEDSA7.159e-2830.09Isoflavone-7-O-methyltransferase 6 OS=Medicago sat... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YD09FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271204 ID=DY271204; Name=DY271204; organism=Citrus clementina; type=EST; length=939bp
CAAAACGGCGTCTCAATGCGTCCCTATATGAACTTGTCTCTTGACAAAGT
AATGATGCCTGGCTGGTTCCAATTGAAAGACCAAATTCTTGAAGGAGAAC
TTTCGTATAATAAAGCCCTCGGAATGGATTTCTACGATTATCTGGGCACC
GACTCCAGGTTCAATGAAGTTTTCAACAATGGAATGATCGGCCAGACTTC
TTTTGTAATCAATAAGATTGTAGAATCCTACAAAGGCTTTCAGAATATTA
CGCGCCTTGTTGACGTTGGCGGTGGTTTAGGAATCACCCTTGCGACCATA
ATTTCCAAATACCCTCATATTAAGGGTATTAATTTTGACGTACCTCATGT
TATAAAAGATGCCTCATCTTATCCCGGCATGGAACATGTTGGCGGAGATA
TGTACCAAAAAATTCCAGAGGGGGATGCCATTTTAATGAAGTGGATGCTT
CATAATTTTGATGATGAGAATTGCATAAAGATACTGAGGAATTGTTACAA
AGCTCTTCCAAATGATGGAAAGGTACTTGTTATTAACTCAACGTTGCCAG
AAGTGCCTGACAGTACCGAGGCTTCAAGGGATTCCTTCATTTTAGATGCA
ATTTTTTTAATCCAAATTCCTCATGGAAGGGAGCGGACCAAAAAGGAGTT
CACTGCATTGGCAATCGAAGCTGGATTTAAGGGTATCAACTTTGAATGTA
ACGTTTGCAATTCCTATGTCATGGAATTCTACAAGTAACTTTGAAGCCAG
ATTGCTTCATTCTTTCTTTATCAAAAAGATGCCTCTTCTCAATTTTATTT
GGAAGTGTCCAATACTCCCATTTTCCTTTCCGGAACTTTCCGGTTTTGTT
TGGCCTTTATGGGCCCCCGGGAACTTCCTATGTATATGCTTTTGGGTGTT
CAAAAAAAAAAGGTCCGGTTTTGGGTTTGGGAAAAAAAA
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