DY271204

Overview
NameDY271204
Unique NameDY271204
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length939
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271204 vs. ExPASy Swiss-Prot
Match: 7OMT9_MEDSA (Isoflavone-7-O-methyltransferase 9 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 9.350e-28
Identity = 68/226 (30.09%), Postives = 122/226 (53.98%), Query Frame = 1
Query:   16 MRPYMNLSLDKVMMPGWFQLKDQILEGELS-YNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPND---GKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFK 681
            + P +   LD  +   + +LK  I E +L+ +   LG  F+D+L  +  +N  FN+ M   +  +   + +    F  +  +VDV              +P +K I FD P V+++ S    + +VGGDM+  IP  DA+L+K++LHN+ D++C++IL+ C +A+ ND   GKV +I+  + E  D  + ++   ++D    +   +G+ER ++E+  L IEAGF+
Sbjct:  111 LAPMVECVLDPTLSGSYHELKKWIYEEDLTLFGVTLGSGFWDFLDKNPEYNTSFNDAMASDSKLINLALRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVINEKKDENQVTQIKLLMDV--NMACLNGKERNEEEWKKLFIEAGFQ 334          
BLAST of DY271204 vs. ExPASy Swiss-Prot
Match: 7OMT8_MEDSA (Isoflavone-7-O-methyltransferase 8 OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 2.083e-27
Identity = 67/226 (29.65%), Postives = 122/226 (53.98%), Query Frame = 1
Query:   16 MRPYMNLSLDKVMMPGWFQLKDQILEGELS-YNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPND---GKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFK 681
            + P +   LD  +   + +LK  I E +L+ +   LG  F+D+L  +  +N  FN+ M   +  +   + +    F  +  +VDV              +P +K I FD P V+++ S    + +VGGDM+  IP  DA+L+K++LHN+ D++C++IL+ C +A+ ND   GKV +I+  + +  D  + ++   ++D    +   +G+ER ++E+  L IEAGF+
Sbjct:  111 LAPMVECVLDPTLSGSYHELKKWIYEEDLTLFGVTLGSGFWDFLDKNPEYNTSFNDAMASDSKLINLALRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDV--NMACLNGKERNEEEWKKLFIEAGFQ 334          
BLAST of DY271204 vs. ExPASy Swiss-Prot
Match: ZRP4_MAIZE (O-methyltransferase ZRP4 OS=Zea mays GN=ZRP4 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.825e-23
Identity = 62/209 (29.67%), Postives = 110/209 (52.63%), Query Frame = 1
Query:   64 WFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVIN-KIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALP---NDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGF 678
            WFQ +   L     +    G   ++    D+ F+ + N+G+   +  +++  I +S + FQ I+ LVDV              +PH+K    D+ HV+  A ++  ++ + GDM++ IP  DA+L+K +LH++D ++C+KIL+NC KA+P     GKV++IN  +   P   +      I D    I   +G ER ++E++ +  EAG+
Sbjct:  142 WFQHE---LPDPCIFKHTHGRGIWELTKDDATFDALVNDGLASDSQLIVDVAIKQSAEVFQGISSLVDVGGGIGAAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIPPREAGGKVIIINMVVGAGPSDMKHKEMQAIFDV--YIMFINGMERDEQEWSKIFSEAGY 345          
BLAST of DY271204 vs. ExPASy Swiss-Prot
Match: OMT12_DICDI (O-methyltransferase 12 OS=Dictyostelium discoideum GN=omt12 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.870e-22
Identity = 55/190 (28.95%), Postives = 103/190 (54.21%), Query Frame = 1
Query:  130 FYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASS------YPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFK 681
            F+++  TD  + ++F+N M   TS +I++++       N   +VD+               P+I GINFD+ ++I  ++S      +P ++HV GD +  +PE D  ++K++LH++ DE CI IL N +K+L  +GK+ + +  L    D +  ++++   D I ++Q    +ER+  E+  L  + GFK
Sbjct:  135 FWEHFETDESYKQLFHNAMKDYTSLIIDRLISKISLSPNFKTVVDIGGSHGFLIGKLLESNPNIHGINFDLENIINSSTSKNENFQHPRLKHVSGDFFNSVPEADCYILKYILHDWSDEKCITILNNIHKSLKPNGKLFINDLVL----DPSNYTKEAVFKD-ILMMQYFDAKERSINEWHQLFEKCGFK 319          
BLAST of DY271204 vs. ExPASy Swiss-Prot
Match: COOMT_COPJA (Columbamine O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.708e-21
Identity = 69/228 (30.26%), Postives = 114/228 (50.00%), Query Frame = 1
Query:   13 SMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKG---FQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPN-DGKVLVINSTL--PEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGF 678
            S+ PY+ L         W  + + +L+G+  Y ++     Y+    D   NE+ N+ M   ++F++  +V           +  +VDV              +PH+K    D+ HVI+     P +++V GDM+  IP  DAIL+K  LHN++D++CIKIL    +ALP+  GKV+++   +    +P  T A R S  +D + +     G+ERTKKE+  L  +A F
Sbjct:  111 SLAPYVMLQTHPEEFSVWSHVIN-VLDGKKPYWESNDTSMYEKTEGDPEINEILNDAMTSHSTFMLPALVSGLMKENVLDGVASIVDVGGNSGVVAKGIVDAFPHVKCSVMDLNHVIERVIKNPKLDYVAGDMFTSIPNADAILLKSTLHNYEDDDCIKILNIAKEALPSTGGKVILVEIVVDTENLPLFTSA-RLSMGMDMMLM----SGKERTKKEWEDLLRKANF 332          
BLAST of DY271204 vs. ExPASy Swiss-Prot
Match: EOMT1_OCIBA (Eugenol O-methyltransferase OS=Ocimum basilicum GN=EOMT1 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.888e-20
Identity = 62/227 (27.31%), Postives = 103/227 (45.37%), Query Frame = 1
Query:   10 VSMRPYMNLSLDKVMMPGWFQLKDQILEGE--LSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKG-FQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFK 681
            +++ P + + LD      W  + +     +    +  A G  F++ L  +      F+  M   +  + +   + YK   + I  LVDV               P IK    D+PHV+    S   + ++GGDM+Q IP  DAIL+K ++H++DD   +KIL+ C  A+   GKV++I+  +    D  E   D    D   +    + +ERT  E+  L  +AGFK
Sbjct:  114 LTVTPLVQVVLDPTFTNPWHHMSEWFTHEKHATQFEAANGCTFWEKLANEPSKGRFFDEAMSCDSRLIAHVFTKDYKHVIEGIRTLVDVGGGNGTMAKAIVEAMPTIKCTVIDLPHVVAGLESTDNLNYIGGDMFQSIPSADAILLKSIIHDWDDVEGLKILKKCKDAVVMGGKVIIIDVVVGVNHDIDEVLEDQLHFDMAMMCYF-NAKERTMSEWEKLIYDAGFK 339          
BLAST of DY271204 vs. ExPASy Swiss-Prot
Match: CVMT1_OCIBA (Chavicol O-methyltransferase OS=Ocimum basilicum GN=CVOMT1 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.224e-19
Identity = 62/226 (27.43%), Postives = 103/226 (45.58%), Query Frame = 1
Query:   10 VSMRPYMNLSLDKVMMPGWFQLKDQILEGE--LSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKG-FQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGF 678
            +++ P + + LD      W  + +          +  A G  F++ L         F+  M   +  V + + + YK     I  LVDV               P +K    D+PHV+    S   + ++GGDM+Q IP  DAIL+K+++H++DDE  +KIL+ C  A+   GKV++I+  +    D  E   D    D + ++   + +ERT  E+  L   AGF
Sbjct:  113 LTVAPLVQVVLDPTFTNPWHYMSEWFKHENHATQFEAANGCTFWEKLANKPSMGRFFDEAMSCDSRLVAHVLTKDYKHVIDGIRTLVDVGGGNGTMAKAIVEAVPTMKCTVLDLPHVVAGLESTDKLSYIGGDMFQSIPSADAILLKFIIHDWDDEEGLKILKRCKDAVGIGGKVIIIDVVVGVNHDVDEVLEDQLHFD-MAMMSYFNAKERTMNEWEKLISAAGF 337          
BLAST of DY271204 vs. ExPASy Swiss-Prot
Match: OMT11_DICDI (Probable inactive O-methyltransferase 11 OS=Dictyostelium discoideum GN=omt11 PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.651e-19
Identity = 60/223 (26.91%), Postives = 116/223 (52.02%), Query Frame = 1
Query:   70 QLKDQILE-GELSYNKALGM-DFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASS---YPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVM 723
            Q+  + LE GE     ++G+ D+++ +  +  +   FN+GMIG T+ ++ K ++          +VD+             +YP++ GINFD   VI  ++    +P ++HV GD ++ +PE D  LMK +L  F DE C ++L+   K++ ++ K+++++  L    DS++       LD I +++   G++R+  E+  L   +GFK   +E    N  ++
Sbjct:  112 QVLPETLEIGENQGPSSIGLSDYWEQIEKNEIYKNEFNDGMIGYTTHIL-KFLKGKIDLSKFETVVDIGGSHGYLIGSLLDRYPNVNGINFDTDMVINSSNEKYQHPRLKHVAGDFFKSVPEADCYLMKLILRCFSDEKCCELLKIISKSMKSNAKIIILDIIL----DSSKYLNFDTYLD-ILMMETLDGKQRSLSEWIKLFEMSGFKIDKYESGSPNYLII 328          
BLAST of DY271204 vs. ExPASy Swiss-Prot
Match: OMT4_DICDI (O-methyltransferase 4 OS=Dictyostelium discoideum GN=omt4 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.161e-16
Identity = 56/199 (28.14%), Postives = 98/199 (49.25%), Query Frame = 1
Query:   94 GELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSY---PGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFK 681
            GE   +K+LG++ +  L       E F N M   +S  I   ++ +  F    ++VD+             KYP+  GINFD+      A      P +EH  G+ ++ +PEGD  ++K +LH++ DE+CIKIL    K++   GKV++ +  +    +    ++    LD + +       E+T K+F+ ++ +AGFK
Sbjct:  127 GEPQCHKSLGVNSWWDLIKKPGEEEFFKNAMKVSSSEAIESALK-FIDFSPFKKIVDIGGSHGRFVCEILEKYPNSHGINFDLESFFNGAGELIKNPRLEHKSGNFFESVPEGDCYILKRILHDWKDEDCIKILETIGKSILPGGKVIIFDCII----NPKNYNKGHLYLD-VMMFHFFGSEEKTIKQFSNISDKAGFK 319          
BLAST of DY271204 vs. ExPASy Swiss-Prot
Match: OMT7_DICDI (O-methyltransferase 7 OS=Dictyostelium discoideum GN=omt7 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.400e-15
Identity = 58/215 (26.98%), Postives = 105/215 (48.84%), Query Frame = 1
Query:   64 WFQLKDQILEGELSYNKALGM------DFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASS---YPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFK 681
            +F+L   I E     NK LG       DF+D + T+  F   FN  M   ++  I  I+++   F +   +VDV             KY ++ GI FD+  VI  +     +P +E+V G  ++ +P  D  ++K +LH++DDE C++IL+   K++  + K+ + +    E+ D  +  + S  LD + +    + RER+  ++  L  ++ FK
Sbjct:  114 YFKLYSTIPES-FEQNKNLGPSSFGFDDFWDIVKTNEHFKYSFNQEMREFSNLSIPTIIKN-TDFSSFNTVVDVGGSHGRIVGELVKKYENLNGIVFDLETVINSSIEKIKHPRIEYVSGSFFESVPSADCYVLKNILHDWDDEKCLEILKTISKSMKENSKIFIFD----EIIDPNDYRKLSLFLD-VTVFHFFNSRERSLNDWKQLCDKSDFK 321          
The following BLAST results are available for this feature:
BLAST of DY271204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
7OMT9_MEDSA9.350e-2830.09Isoflavone-7-O-methyltransferase 9 OS=Medicago sat... [more]
7OMT8_MEDSA2.083e-2729.65Isoflavone-7-O-methyltransferase 8 OS=Medicago sat... [more]
ZRP4_MAIZE1.825e-2329.67O-methyltransferase ZRP4 OS=Zea mays GN=ZRP4 PE=2 ... [more]
OMT12_DICDI5.870e-2228.95O-methyltransferase 12 OS=Dictyostelium discoideum... [more]
COOMT_COPJA1.708e-2130.26Columbamine O-methyltransferase OS=Coptis japonica... [more]
EOMT1_OCIBA1.888e-2027.31Eugenol O-methyltransferase OS=Ocimum basilicum GN... [more]
CVMT1_OCIBA1.224e-1927.43Chavicol O-methyltransferase OS=Ocimum basilicum G... [more]
OMT11_DICDI4.651e-1926.91Probable inactive O-methyltransferase 11 OS=Dictyo... [more]
OMT4_DICDI2.161e-1628.14O-methyltransferase 4 OS=Dictyostelium discoideum ... [more]
OMT7_DICDI1.400e-1526.98O-methyltransferase 7 OS=Dictyostelium discoideum ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YD09FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271204 ID=DY271204; Name=DY271204; organism=Citrus clementina; type=EST; length=939bp
CAAAACGGCGTCTCAATGCGTCCCTATATGAACTTGTCTCTTGACAAAGT
AATGATGCCTGGCTGGTTCCAATTGAAAGACCAAATTCTTGAAGGAGAAC
TTTCGTATAATAAAGCCCTCGGAATGGATTTCTACGATTATCTGGGCACC
GACTCCAGGTTCAATGAAGTTTTCAACAATGGAATGATCGGCCAGACTTC
TTTTGTAATCAATAAGATTGTAGAATCCTACAAAGGCTTTCAGAATATTA
CGCGCCTTGTTGACGTTGGCGGTGGTTTAGGAATCACCCTTGCGACCATA
ATTTCCAAATACCCTCATATTAAGGGTATTAATTTTGACGTACCTCATGT
TATAAAAGATGCCTCATCTTATCCCGGCATGGAACATGTTGGCGGAGATA
TGTACCAAAAAATTCCAGAGGGGGATGCCATTTTAATGAAGTGGATGCTT
CATAATTTTGATGATGAGAATTGCATAAAGATACTGAGGAATTGTTACAA
AGCTCTTCCAAATGATGGAAAGGTACTTGTTATTAACTCAACGTTGCCAG
AAGTGCCTGACAGTACCGAGGCTTCAAGGGATTCCTTCATTTTAGATGCA
ATTTTTTTAATCCAAATTCCTCATGGAAGGGAGCGGACCAAAAAGGAGTT
CACTGCATTGGCAATCGAAGCTGGATTTAAGGGTATCAACTTTGAATGTA
ACGTTTGCAATTCCTATGTCATGGAATTCTACAAGTAACTTTGAAGCCAG
ATTGCTTCATTCTTTCTTTATCAAAAAGATGCCTCTTCTCAATTTTATTT
GGAAGTGTCCAATACTCCCATTTTCCTTTCCGGAACTTTCCGGTTTTGTT
TGGCCTTTATGGGCCCCCGGGAACTTCCTATGTATATGCTTTTGGGTGTT
CAAAAAAAAAAGGTCCGGTTTTGGGTTTGGGAAAAAAAA
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