DY271209

Overview
NameDY271209
Unique NameDY271209
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1035
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271209 vs. ExPASy Swiss-Prot
Match: THI4_HALMA (Putative thiazole biosynthetic enzyme OS=Haloarcula marismortui GN=rrnAC1782 PE=3 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.908e-16
Identity = 54/181 (29.83%), Postives = 95/181 (52.49%), Query Frame = 1
Query:  271 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDY----DEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMNPNVMEAKVVVSSCG 798
            +F  + E+ V+R + + +  + + ++D+D    G G +GL  A EL++   +Q+ ++E++   GGG WLGG L + + VR PA   LDEL +D+    D +  YV     A    + + K       K+ N     D++++   RVGG+V NW  V       +C++P  +EA +V+ + G
Sbjct:    9 QFSDVGEAEVTRAIGQEWTEEFMDFSDSDVIIVGGGPSGLMAAKELAER-GVQVMVVEKNNYLGGGFWLGGFLMNKVTVRDPAQQVLDELEVDHKRSKDSEGLYVANGPEA---CSGLIKAACDAGAKMQNMTEFTDIVIREDHRVGGIVMNWTPVHALPREITCVDPIAVEADLVIDATG 185          
BLAST of DY271209 vs. ExPASy Swiss-Prot
Match: THI4_NATPD (Putative thiazole biosynthetic enzyme OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=NP5174A PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 9.469e-16
Identity = 51/178 (28.65%), Postives = 93/178 (52.25%), Query Frame = 1
Query:  271 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYD-EQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMNPNVMEAKVVVSSCG 798
            +F  + E+ V+R + + +  + + ++D+D    G G +GL  A ELS+   +Q  ++E++   GGG WLGG L + + VR PA   L++L +D+   QD+  +         + + K       K+ N     D++++   RVGG+V NW  V       +C++P  +EA +V+ + G
Sbjct:    6 QFSDVGEAEVTRAIGQEWTEEFMDFSDSDVIIVGGGPSGLMAAKELSER-GVQTMVVEKNNYLGGGFWLGGFLMNKVTVRDPAQNVLEDLDVDFKRSQDSEGLYVANGPEACSGLIKAACDAGAKMQNMTEFTDIVIREDHRVGGIVMNWTPVHALPREITCVDPIAVEADLVIDATG 182          
BLAST of DY271209 vs. ExPASy Swiss-Prot
Match: THI4_METMJ (Putative thiazole biosynthetic enzyme OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=Memar_2251 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.237e-15
Identity = 49/151 (32.45%), Postives = 78/151 (51.66%), Query Frame = 1
Query:  283 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDE-QDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-GRVGGVVTNWALVSM 729
            + E  +SR +       +I + + D    G G +GL+CA  L +   ++ A+IE+ +S GGG W GG +F  +VV++ A   LD  GI Y   ++ Y V K         ++       V+ FN    ED++++G GR+GG+V NW  V M
Sbjct:    3 LNEVTISRAILEEQHRALIDHLEMDAAVIGGGPSGLACAALLGEK-GVKCALIEKKLSIGGGMWGGGMMFPRIVVQEDARRLLDRFGIAYKAFEEGYYVAKSVEAVAK--LTAAACDAGVEFFNLTTVEDVMIRGDGRIGGLVVNWTPVDM 150          
BLAST of DY271209 vs. ExPASy Swiss-Prot
Match: THI4_AERPE (Putative thiazole biosynthetic enzyme OS=Aeropyrum pernix GN=APE_2149.1 PE=3 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.615e-15
Identity = 50/175 (28.57%), Postives = 89/175 (50.86%), Query Frame = 1
Query:  274 FDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMNPNVMEAKVVVSSCG 798
            F  + E+ V+  +   + + +  +  +D    GAG AGL+ A+ L++    ++ I+EQ+   GGG WLGG   + + +R PA   LDEL + Y+     +      L  + + ++ L     ++ N    +D+IV+  RV GVV NW+ V       +C++P  + A+ VV + G
Sbjct:    3 FARVNEADVTEAILDGFYSSLKKHLRSDVIVVGAGPAGLTAAWRLAE-AGARVLIVEQNNYLGGGLWLGGYFMNPVTIRAPAQRILDELEVPYEAVKPGLYRTKGPLLAAKLAARAL-EAGAEVLNLTMLDDVIVENSRVAGVVVNWSPVQGLPRQITCVDPVGLRAEYVVDATG 175          
BLAST of DY271209 vs. ExPASy Swiss-Prot
Match: THI4_METAC (Putative thiazole biosynthetic enzyme OS=Methanosarcina acetivorans GN=MA_2851 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.755e-15
Identity = 53/178 (29.78%), Postives = 93/178 (52.25%), Query Frame = 1
Query:  283 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLA---RPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMNPNVMEAKVVVSSCGPE 804
            + E I++R +   Y    + Y D D    G G A L  A  L++   +++A+ EQ +S GGG W GG +F  +VV++ A   LD+ GI Y E ++   + ++       + KL+A       ++FN V+ ED++++   RV G+V NW  V+     +  ++P ++  K+V+   G E
Sbjct:    3 LDEVIITRAIFDEYSKTFLDYTDIDVALVGGGPANLVAAKYLAE-AGVKVALYEQKLSLGGGMWAGGMMFPRIVVQEEATRILDDFGIRYKEYESGYYVANSV----ESVGKLIAGATSAGAEVFNLVSFEDIMIRENDRVTGIVINWGPVTTQ---RLHVDPLMIRTKLVIDGTGHE 172          
BLAST of DY271209 vs. ExPASy Swiss-Prot
Match: THI4_DESOH (Putative thiazole biosynthetic enzyme OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=Dole_2426 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.699e-15
Identity = 54/174 (31.03%), Postives = 89/174 (51.15%), Query Frame = 1
Query:  283 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYD--EQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMNPNVMEAKVVVSSCG 798
            + E  +SR +  R+   +I   + D    G G +GL  A+ L++    ++A+ E+ +S GGG W G  LF+ +VV+K A   LD + I Y    +D Y      A+ T T  +   A+  V +FN V  ED++++  R+ G+V NW+ V M       ++P  M A  V+ + G
Sbjct:    3 LNEVTISRAIIDRFYEKLIANLEVDVAVVGGGPSGLVAAWRLARAGR-KVALFERKLSIGGGMWGGAMLFNEIVVQKSALHVLDAMEIGYRLYAEDYYTADAVEAISTLTSQA---AKAGVAIFNCVTVEDVMIRPDRIVGLVLNWSPVEM---AGLHVDPLAMRASFVIDATG 169          
BLAST of DY271209 vs. ExPASy Swiss-Prot
Match: THI4_METBF (Putative thiazole biosynthetic enzyme OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=Mbar_A2100 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 8.016e-15
Identity = 55/176 (31.25%), Postives = 88/176 (50.00%), Query Frame = 1
Query:  283 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDE-QDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMNPNVMEAKVVVSSCGPE 804
            + E I++R +   Y    + Y + D    G G A L  A  L++    ++AI EQ +S GGG W GG +F  +VV++ A   LD+ GI Y E Q  Y V          I     A    ++FN V+ ED++++   RV G+V NW  V++    +  ++P ++  K+V+   G E
Sbjct:    3 LDEVIITRAIFDEYSKTFLDYTEVDVALIGGGPANLVAARYLAE-AGAKVAIYEQKLSLGGGMWAGGMMFPRIVVQEEACRILDDFGIRYKEYQPGYYVANSVESVGKLISGATSA--GAEVFNLVSFEDVMIRENDRVTGIVVNWGPVTVQ---RLHVDPLMIRTKLVIDGTGHE 172          
BLAST of DY271209 vs. ExPASy Swiss-Prot
Match: THI4_METMA (Putative thiazole biosynthetic enzyme OS=Methanosarcina mazei GN=MM_0222 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.332e-14
Identity = 53/176 (30.11%), Postives = 90/176 (51.14%), Query Frame = 1
Query:  283 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLA---RPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMNPNVMEAKVVVSSCG 798
            + E I++R +   Y    + Y D D    G G A L  A  L++    ++AI EQ +S GGG W GG +F  +VV++ A   LD+ GI Y E +    + ++       + KL+A       ++FN V+ ED++++   RV G+V NW  V+     +  ++P ++  K+V+   G
Sbjct:    3 LDEVIITRAIFEEYSKTFLEYTDIDVALVGGGPANLVAAKYLAE-AGAKVAIYEQKLSLGGGMWAGGMMFPRIVVQEEACRVLDDFGIRYKEYEPGYFVANSV----ESVGKLIAGATSAGAEVFNLVSFEDIMIRENDRVTGIVINWGPVTTQ---RLHVDPLMIRTKLVIDGTG 170          
BLAST of DY271209 vs. ExPASy Swiss-Prot
Match: THI4_FERNB (Putative thiazole biosynthetic enzyme OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=Fnod_1422 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.978e-14
Identity = 44/144 (30.56%), Postives = 75/144 (52.08%), Query Frame = 1
Query:  283 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNW 714
            +K+  +S+ + + Y   +    + D    G G + L+ A EL+KN   ++AI E    PGGG W GG +F+ +V+      +L E  I Y ++D ++V+   A+  ++ M     +    +FN V  EDL++   R+ GVV NW
Sbjct:    3 MKDLKISQLIVKHYFQKLNDVLNVDVAIAGCGPSALALATELAKNGR-KVAIFEAKNEPGGGIWGGGMMFNELVLESELEWYLKEHHIKYKKEDEFIVVD--AVHFASAMLYNATKNGAYIFNNVFVEDLVMYNERISGVVINW 143          
BLAST of DY271209 vs. ExPASy Swiss-Prot
Match: THI4_METBU (Putative thiazole biosynthetic enzyme OS=Methanococcoides burtonii (strain DSM 6242) GN=Mbur_2109 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.786e-14
Identity = 49/173 (28.32%), Postives = 86/173 (49.71%), Query Frame = 1
Query:  283 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMNPNVMEAKVVVSSCG 798
            + E  +SR +   +    + Y D D    G G A L  A  L++   ++  I E+ ++ GGG W GG +F  +VV++ A   LDE GI Y E +N   + ++      ++S   +    ++FN V  ED++++    + G+V NW  V +    +  ++P  + +KVVV   G
Sbjct:    3 LDEVTISRAIIEEFSKVFLDYTDVDVALVGGGPANLVAAKYLAE-AGLKTVIYEKKLAVGGGMWAGGMMFPRIVVQEDALHILDEFGISYHEYENGYYVANSIESVGKLISGATS-AGAEIFNLVNVEDVMIRENDEICGLVINWTAVEIG---KLHVDPLAIRSKVVVDGTG 170          
The following BLAST results are available for this feature:
BLAST of DY271209 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
THI4_HALMA1.908e-1629.83Putative thiazole biosynthetic enzyme OS=Haloarcul... [more]
THI4_NATPD9.469e-1628.65Putative thiazole biosynthetic enzyme OS=Natronomo... [more]
THI4_METMJ1.237e-1532.45Putative thiazole biosynthetic enzyme OS=Methanocu... [more]
THI4_AERPE1.615e-1528.57Putative thiazole biosynthetic enzyme OS=Aeropyrum... [more]
THI4_METAC2.755e-1529.78Putative thiazole biosynthetic enzyme OS=Methanosa... [more]
THI4_DESOH4.699e-1531.03Putative thiazole biosynthetic enzyme OS=Desulfoco... [more]
THI4_METBF8.016e-1531.25Putative thiazole biosynthetic enzyme OS=Methanosa... [more]
THI4_METMA2.332e-1430.11Putative thiazole biosynthetic enzyme OS=Methanosa... [more]
THI4_FERNB3.978e-1430.56Putative thiazole biosynthetic enzyme OS=Fervidoba... [more]
THI4_METBU6.786e-1428.32Putative thiazole biosynthetic enzyme OS=Methanoco... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YD14FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271209 ID=DY271209; Name=DY271209; organism=Citrus clementina; type=EST; length=1035bp
ATCATCACTGCTGCAAATCAAATTACTTCTCATTATCAAACTTCTAAGCA
GCAGGGGAAGGAGGGGTTAAAAAAAAAAAACATGGCAGCCATGACTTCTA
CAGCTTTCGCTCCTTCAGTTTCGTCCACCACCAATAAGCTCTTTGACTCA
TCCTTTCATGGGGCTCCCATGTCACCTTCTCTTCTACGTCTTCAACCCAT
CAAATCTTCTCGTCCCAACAACTTGTCCATTTCTGCTTCTGCTTCTCCTC
CTTATGACTTGAACACTTTCAAGTTTGACCCCATCAAAGAATCCATTGTT
TCTCGTGAAATGACACGCAGGTACATGACGGACATGATCACTTATGCTGA
CACTGATGTGGTAGTGGTTGGTGCTGGCTCTGCTGGCCTCTCTTGTGCTT
ATGAGCTCAGCAAAAACCCCAACATTCAGATTGCTATTATCGAACAGTCT
GTTAGCCCCGGCGGTGGCGCGTGGCTCGGTGGACAGCTCTTCTCTGCCAT
GGTTGTGCGCAAACCAGCCCACATCTTCCTTGACGAGCTTGGCATCGACT
ACGATGAGCAAGACAACTATGTTGTGATCAAGCATGCAGCGCTGTTCACC
TCCACTATAATGAGCAAGCTCCTGGCCCGCCCCAACGTCAAGCTCTTTAA
TGCAGTGGCAGCCGAGGACTTGATAGTCAAAGGCGGCAGAGTTGGTGGTG
TGGTGACCAACTGGGCGTTGGTGTCAATGAATCACGATACACAGTCTTGC
ATGAATCCCAATGTAATGGAAGCCAAGGTGGTTGTGAGCTCCTGTGGCCC
TGAAGGGCCTTTGGGTGCCCTGGAGTAAGAAGTTGAAAAATATCGGAATG
ATTGAGGAAGTGGCCGGGATGAAGGCCCTGAACTGGACTCCGCAAAAAAT
CTATGGGAAAGGTGACCCGGGGAGTTGGTCCCGGGGAAAAAATTTCCCGG
CAGGAAATTTTGCCAAAATTGAAGGGGCCCCCAAAATGGGGGCCCAATTT
TGAACAAATGAAAAAAACCCGGGGCAAAAAGGCTC
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