DY271209

Overview
NameDY271209
Unique NameDY271209
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1035
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271209 vs. ExPASy Swiss-Prot
Match: THI4_SULAC (Putative thiazole biosynthetic enzyme OS=Sulfolobus acidocaldarius GN=Saci_0854 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 8.862e-14
Identity = 53/189 (28.04%), Postives = 94/189 (49.74%), Query Frame = 1
Query:  262 NTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMNPNVMEAKVVVSSCGPEGPLGAL 822
            ++ K   I E  +SR + ++ M D + + + D    GAG AG+S AY L+K+  ++  + E+ +S GGG   G  LF  +V+  PA   L E+ I  ++ ++ V I  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       ++P  + AK VV + G +  + A+
Sbjct:    3 DSIKIKAIDEVKISRYIIKQTMEDWMNFVENDVVIVGAGPAGMSAAYYLAKH-GLKTLVFERRLSFGGGIGGGAMLFHKLVIESPADEVLKEMNIRLEKVEDGVYIVDSAEFMAKLAASAI-DAGAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---AGLHVDPVFISAKAVVDATGHDAEVVAV 186          
BLAST of DY271209 vs. ExPASy Swiss-Prot
Match: THI4_ARCFU (Putative thiazole biosynthetic enzyme OS=Archaeoglobus fulgidus GN=AF_0702 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.974e-13
Identity = 52/181 (28.73%), Postives = 94/181 (51.93%), Query Frame = 1
Query:  271 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLAR---PNVKLFNAVAAEDLIVKGGRVG--GVVTNWALVSMNHDTQSCMNPNVMEAKVVVSSCG 798
            KF  + E+ +++ +      + + YA++D    GAG +GL+ A  L++   ++  ++E+ +S GGG   GG LF  +VV + A   LD+ GI Y E  N++V   A       M+KL A+      K+ + V+ ED+I +   +G  GV   W+ V +   +   ++P  + ++ VV + G
Sbjct:    4 KFTEVMEAEITKAIVETASEEWVEYAESDVIVVGAGPSGLTAARYLAEK-GLKTLVLERRLSFGGGIGGGGMLFHKVVVEREAKDILDDFGIRYTEHRNFLVADSA-----EFMAKLAAKAIDAGAKIIHGVSVEDVIFRDDPLGVRGVCIQWSAVEI---SGLHVDPLFLRSRAVVDATG 175          
BLAST of DY271209 vs. ExPASy Swiss-Prot
Match: THI4_METTP (Putative thiazole biosynthetic enzyme OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=Mthe_1121 PE=3 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 2.579e-13
Identity = 53/177 (29.94%), Postives = 90/177 (50.85%), Query Frame = 1
Query:  283 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDE-QDNYVVIKHAALFTSTIMSKLLA---RPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMNPNVMEAKVVVSSCG 798
            + E  ++R +   Y+   +   D D    GAG A L  A  L++  ++++ + E+ +S GGG W GG +F  +VV+K A   LDE  I Y E ++ Y V       +  +++KL A       +L N V+ ED++++ G R+ G+V NW    M       ++P  + A+VV+   G
Sbjct:    3 LDEVKITRAIVESYLESFLKCTDVDVALVGAGPANLVAAKRLAE-ADVRVVLFEKRLSVGGGLWGGGMMFPRIVVQKEACRILDEYDIWYREFEEGYYVAD-----SIEVVAKLTAGAIDAGAELINLVSVEDVMIREGDRIVGLVINWTAADM---AGIHVDPLAIRARVVIDGTG 170          
BLAST of DY271209 vs. ExPASy Swiss-Prot
Match: THI4_SULIM (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=M1425_1670 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.744e-13
Identity = 50/178 (28.09%), Postives = 86/178 (48.31%), Query Frame = 1
Query:  271 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMNPNVMEAKVVVSSCG 798
            K   ++E  +SR + +  M D   + ++D    GAG +GLS AY L+K   ++  + E+ +S GGG   G  LF  +++ KPA   L E+ +   E +  V +  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       ++P  + AK VV + G
Sbjct:    4 KIKQVEEVKISRYIIKETMEDWYQFVESDVVIVGAGPSGLSAAYYLAK-AGLKTLVFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNVRLKEVEEGVYVVDSAEFMAKLATAAI-DAGAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATG 176          
BLAST of DY271209 vs. ExPASy Swiss-Prot
Match: THI4_SULSO (Putative thiazole biosynthetic enzyme OS=Sulfolobus solfataricus GN=SSO0436 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 7.502e-13
Identity = 51/178 (28.65%), Postives = 85/178 (47.75%), Query Frame = 1
Query:  271 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMNPNVMEAKVVVSSCG 798
            K   + E  +SR + +  M D   + ++D    GAG +GLS AY L+K   ++  + E+ +S GGG   G  LF  +++ KPA   L E+ I   E +  V +  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       ++P  + AK VV + G
Sbjct:    4 KIKQVDEVKISRYIIKETMEDWYQFVESDVVIVGAGPSGLSAAYYLAK-AGLKTLVFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNIRLKEVEEGVYVVDSAEFMAKLATAAI-DAGAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATG 176          
BLAST of DY271209 vs. ExPASy Swiss-Prot
Match: THI4_SULIY (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=YG5714_1786 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 9.798e-13
Identity = 50/178 (28.09%), Postives = 85/178 (47.75%), Query Frame = 1
Query:  271 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMNPNVMEAKVVVSSCG 798
            K   + E  +SR + +  M D   + ++D    GAG +GLS AY L+K   ++  + E+ +S GGG   G  LF  +++ KPA   L E+ +   E +  V +  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       ++P  + AK VV + G
Sbjct:    4 KIKQVDEVKISRYIIKETMEDWYQFVESDVVIVGAGPSGLSAAYYLAK-AGLKTLVFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNVRLKEVEEGVYVVDSAEFMAKLATAAI-DAGAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATG 176          
BLAST of DY271209 vs. ExPASy Swiss-Prot
Match: THI4_SULIN (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=YN1551_1140 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 9.798e-13
Identity = 50/178 (28.09%), Postives = 85/178 (47.75%), Query Frame = 1
Query:  271 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMNPNVMEAKVVVSSCG 798
            K   + E  +SR + +  M D   + ++D    GAG +GLS AY L+K   ++  + E+ +S GGG   G  LF  +++ KPA   L E+ +   E +  V +  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       ++P  + AK VV + G
Sbjct:    4 KIKQVDEVKISRYIIKETMEDWYQFVESDVVIVGAGPSGLSAAYYLAK-AGLKTLVFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNVRLKEVEEGVYVVDSAEFMAKLATAAI-DAGAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATG 176          
BLAST of DY271209 vs. ExPASy Swiss-Prot
Match: THI4_SULIL (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=LS215_1798 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 9.798e-13
Identity = 50/178 (28.09%), Postives = 85/178 (47.75%), Query Frame = 1
Query:  271 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMNPNVMEAKVVVSSCG 798
            K   + E  +SR + +  M D   + ++D    GAG +GLS AY L+K   ++  + E+ +S GGG   G  LF  +++ KPA   L E+ +   E +  V +  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       ++P  + AK VV + G
Sbjct:    4 KIKQVDEVKISRYIIKETMEDWYQFVESDVVIVGAGPSGLSAAYYLAK-AGLKTLVFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNVRLKEVEEGVYVVDSAEFMAKLATAAI-DAGAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATG 176          
BLAST of DY271209 vs. ExPASy Swiss-Prot
Match: THI4_SULIK (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=M164_1717 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 9.798e-13
Identity = 50/178 (28.09%), Postives = 85/178 (47.75%), Query Frame = 1
Query:  271 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMNPNVMEAKVVVSSCG 798
            K   + E  +SR + +  M D   + ++D    GAG +GLS AY L+K   ++  + E+ +S GGG   G  LF  +++ KPA   L E+ +   E +  V +  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       ++P  + AK VV + G
Sbjct:    4 KIKQVDEVKISRYIIKETMEDWYQFVESDVVIVGAGPSGLSAAYYLAK-AGLKTLVFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNVRLKEVEEGVYVVDSAEFMAKLATAAI-DAGAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATG 176          
BLAST of DY271209 vs. ExPASy Swiss-Prot
Match: THI4_SULIA (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain M.16.27) GN=M1627_1786 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 9.798e-13
Identity = 50/178 (28.09%), Postives = 85/178 (47.75%), Query Frame = 1
Query:  271 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMNPNVMEAKVVVSSCG 798
            K   + E  +SR + +  M D   + ++D    GAG +GLS AY L+K   ++  + E+ +S GGG   G  LF  +++ KPA   L E+ +   E +  V +  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       ++P  + AK VV + G
Sbjct:    4 KIKQVDEVKISRYIIKETMEDWYQFVESDVVIVGAGPSGLSAAYYLAK-AGLKTLVFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNVRLKEVEEGVYVVDSAEFMAKLATAAI-DAGAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATG 176          
The following BLAST results are available for this feature:
BLAST of DY271209 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
THI4_SULAC8.862e-1428.04Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_ARCFU1.974e-1328.73Putative thiazole biosynthetic enzyme OS=Archaeogl... [more]
THI4_METTP2.579e-1329.94Putative thiazole biosynthetic enzyme OS=Methanosa... [more]
THI4_SULIM5.744e-1328.09Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULSO7.502e-1328.65Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIY9.798e-1328.09Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIN9.798e-1328.09Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIL9.798e-1328.09Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIK9.798e-1328.09Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIA9.798e-1328.09Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YD14FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271209 ID=DY271209; Name=DY271209; organism=Citrus clementina; type=EST; length=1035bp
ATCATCACTGCTGCAAATCAAATTACTTCTCATTATCAAACTTCTAAGCA
GCAGGGGAAGGAGGGGTTAAAAAAAAAAAACATGGCAGCCATGACTTCTA
CAGCTTTCGCTCCTTCAGTTTCGTCCACCACCAATAAGCTCTTTGACTCA
TCCTTTCATGGGGCTCCCATGTCACCTTCTCTTCTACGTCTTCAACCCAT
CAAATCTTCTCGTCCCAACAACTTGTCCATTTCTGCTTCTGCTTCTCCTC
CTTATGACTTGAACACTTTCAAGTTTGACCCCATCAAAGAATCCATTGTT
TCTCGTGAAATGACACGCAGGTACATGACGGACATGATCACTTATGCTGA
CACTGATGTGGTAGTGGTTGGTGCTGGCTCTGCTGGCCTCTCTTGTGCTT
ATGAGCTCAGCAAAAACCCCAACATTCAGATTGCTATTATCGAACAGTCT
GTTAGCCCCGGCGGTGGCGCGTGGCTCGGTGGACAGCTCTTCTCTGCCAT
GGTTGTGCGCAAACCAGCCCACATCTTCCTTGACGAGCTTGGCATCGACT
ACGATGAGCAAGACAACTATGTTGTGATCAAGCATGCAGCGCTGTTCACC
TCCACTATAATGAGCAAGCTCCTGGCCCGCCCCAACGTCAAGCTCTTTAA
TGCAGTGGCAGCCGAGGACTTGATAGTCAAAGGCGGCAGAGTTGGTGGTG
TGGTGACCAACTGGGCGTTGGTGTCAATGAATCACGATACACAGTCTTGC
ATGAATCCCAATGTAATGGAAGCCAAGGTGGTTGTGAGCTCCTGTGGCCC
TGAAGGGCCTTTGGGTGCCCTGGAGTAAGAAGTTGAAAAATATCGGAATG
ATTGAGGAAGTGGCCGGGATGAAGGCCCTGAACTGGACTCCGCAAAAAAT
CTATGGGAAAGGTGACCCGGGGAGTTGGTCCCGGGGAAAAAATTTCCCGG
CAGGAAATTTTGCCAAAATTGAAGGGGCCCCCAAAATGGGGGCCCAATTT
TGAACAAATGAAAAAAACCCGGGGCAAAAAGGCTC
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