DY271211

Overview
NameDY271211
Unique NameDY271211
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length946
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271211 vs. ExPASy Swiss-Prot
Match: PLCH2_MOUSE (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase eta-2 OS=Mus musculus GN=Plch2 PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 3.844e-21
Identity = 71/202 (35.15%), Postives = 104/202 (51.49%), Query Frame = 1
Query:  196 LHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFHRRGLNLEAFFKYL---FGDINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGE--ILFTPGSEC*KEFPSP 786
            L RFL   QK +  + E  Q II+       L    +  L ++ F  Y     GDI  P      VH DMT P+SHYFI + HN+YL G+QL S          LQ G R +E+D W     + + V HG T+T+ +     + +I +YAF+ +EYPV++++E+H +   Q K+A+ +T  LG+   L +  SE     PSP
Sbjct:  337 LQRFLEVEQKMNGVTLESCQNIIEQFEPC--LENKSKGMLGIDGFTNYTRSPAGDIFNPEHNR--VHQDMTQPLSHYFITSSHNTYLVGDQLMSQSRVDMYAWVLQAGCRCVEVDCWDGPDGEPI-VHHGYTLTSKILFKDVIETINKYAFIKNEYPVILSIENHCSVVQQKKMAQYLTDILGDKLDLSSVSSEDATMLPSP 533          
BLAST of DY271211 vs. ExPASy Swiss-Prot
Match: PLCZ1_HUMAN (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase zeta-1 OS=Homo sapiens GN=PLCZ1 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 5.020e-21
Identity = 67/209 (32.06%), Postives = 115/209 (55.02%), Query Frame = 1
Query:  136 DAVKSMFDQYSENGTMTV-DHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFHRRGLNLEAFFKYLFGDINPPL---SPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFT 750
            + +  +F+ YSEN  + +  +L +FL + Q   + SK  A  II     ++ +   H+  ++LE F +Y+  D    L   +    V+ DMT P++ YFI + HN+YL  +QL         + AL KG R +E+D W  ++ + V V HG T+T+ +     +++I +YAF+ S+YPVV++LE+H +   Q  +A+ +  T GE L +
Sbjct:   71 EEIIEIFNTYSENRKILLASNLAQFLTQEQYAAEMSKAIAFEIIQKYEPIEEVRKAHQ--MSLEGFTRYM--DSRECLLFKNECRKVYQDMTHPLNDYFISSSHNTYLVSDQLLGPSDLWGYVSALVKGCRCLEIDCWDGAQNEPV-VYHGYTLTSKLLFKTVIQAIHKYAFMTSDYPVVLSLENHCSTAQQEVMADNLQATFGESLLS 274          
BLAST of DY271211 vs. ExPASy Swiss-Prot
Match: PLCH2_HUMAN (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase eta-2 OS=Homo sapiens GN=PLCH2 PE=2 SV=3)

HSP 1 Score: 100.138 bits (248), Expect = 1.908e-20
Identity = 67/200 (33.50%), Postives = 100/200 (50.00%), Query Frame = 1
Query:  196 LHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFHRRGLNLEAFFKYLFGDINPPLSPTPV-VHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGE--ILFTPGSEC*KEFPSP 786
            L RFL   QK    + E  Q II+            +  L ++ F  Y         +P    VH DMT P+SHYFI + HN+YL G+QL S          LQ G R +E+D W     + + V HG T+T+ +     + +I +YAF+ +EYPV++++E+H +   Q K+A+ +T  LG+   L +  SE     PSP
Sbjct:  263 LQRFLQVEQKMAGVTLESCQDIIEQFEPCPENK--SKGLLGIDGFTNYTRSPAGDIFNPEHHHVHQDMTQPLSHYFITSSHNTYLVGDQLMSQSRVDMYAWVLQAGCRCVEVDCWDGPDGEPI-VHHGYTLTSKILFKDVIETINKYAFIKNEYPVILSIENHCSVIQQKKMAQYLTDILGDKLDLSSVSSEDATTLPSP 459          
BLAST of DY271211 vs. ExPASy Swiss-Prot
Match: PLC_DICDI (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase OS=Dictyostelium discoideum GN=plc PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.492e-20
Identity = 53/160 (33.12%), Postives = 90/160 (56.25%), Query Frame = 1
Query:  313 LNLEAFFKYLFGDINPPLSP-TPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC*KEFPSPD 789
            ++ E F +++ G+ N    P T  V+ D + P+S+YFI + HN+YL+G+QL    +       L++G + +ELD+W  +  D + + HG T+T+ ++      +IK   F  S YPV+++LE H +   Q  +A  + +  GE+L TP  E  KE P+ D
Sbjct:  296 ISFENFEEFICGEANLAQYPHTSTVYQDTSKPLSYYFINSSHNTYLSGHQLKGLSTSEMYTNTLRQGCKCVELDVWDGNDGDPI-IFHGNTLTSQIKFSHVCETIKARGFETSPYPVILSLEVHCSVPQQIMMANHMKEIFGEMLPTPLPEGTKELPTLD 454          
BLAST of DY271211 vs. ExPASy Swiss-Prot
Match: PLCB1_HUMAN (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-1 OS=Homo sapiens GN=PLCB1 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.492e-20
Identity = 63/200 (31.50%), Postives = 109/200 (54.50%), Query Frame = 1
Query:  181 MTVDHLHRFLIEVQKEDKASK--------EDAQAIIDSLRELKHLNIFHRRG-LNLEAFFKYLFGDINPPLSPTPV-VHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL-HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEIL 744
            +TVD +  F+   Q++ + ++        E  Q +I+   + +  N   R+G ++++ F +YL G+ N  +SP  + ++ DM+ P+SHYFI + HN+YLT  QL  + S     + L  G R +ELD W     +   V+ HG TMT  +   + + +I E AF  S +P++++ E+H+ +P  QAK+AE      G+ L
Sbjct:  240 LTVDQMMDFINLKQRDPRLNEILYPPLKQEQVQVLIE---KYEPNNSLARKGQISVDGFMRYLSGEENGVVSPEKLDLNEDMSQPLSHYFINSSHNTYLTAGQLAGNSSVEMYRQVLLSGCRCVELDCWKGRTAEEEPVITHGFTMTTEISFKEVIEAIAECAFKTSPFPILLSFENHVDSPKQQAKMAEYCRLIFGDAL 436          
BLAST of DY271211 vs. ExPASy Swiss-Prot
Match: PLCB4_HUMAN (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-4 OS=Homo sapiens GN=PLCB4 PE=1 SV=3)

HSP 1 Score: 98.9821 bits (245), Expect = 4.250e-20
Identity = 64/218 (29.36%), Postives = 114/218 (52.29%), Query Frame = 1
Query:  142 VKSMFDQYSENGT--MTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFH------RRGL-NLEAFFKYLFGDINPPLSPTPV-VHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL-HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE 762
            ++ +F + + + T  +TVD L  FL E Q++ + + E      D+ R ++ + ++       ++GL + + F +YL  D N P+    + ++ +M  P++HYFI + HN+YLTG Q     S     + L  G R +ELD W    +D   ++ HG  M   +     +++IKE AFV SEYPV+++ E+H +   Q K+++      G++L     E
Sbjct:  222 IEDLFKKINGDKTDYLTVDQLVSFLNEHQRDPRLN-EILFPFYDAKRAMQIIEMYEPDEDLKKKGLISSDGFCRYLMSDENAPVFLDRLELYQEMDHPLAHYFISSSHNTYLTGRQFGGKSSVEMYRQVLLAGCRCVELDCWDGKGEDQEPIITHGKAMCTDILFKDVIQAIKETAFVTSEYPVILSFENHCSKYQQYKMSKYCEDLFGDLLLKQALE 438          
BLAST of DY271211 vs. ExPASy Swiss-Prot
Match: PLCB4_BOVIN (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-4 (Fragment) OS=Bos taurus GN=PLCB4 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.551e-20
Identity = 64/218 (29.36%), Postives = 114/218 (52.29%), Query Frame = 1
Query:  142 VKSMFDQYSENGT--MTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFH------RRGL-NLEAFFKYLFGDINPPLSPTPV-VHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL-HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE 762
            ++ +F + + + T  +TVD L  FL E Q++ + + E      D+ R ++ + ++       ++GL + + F +YL  D N P+    + ++ +M  P++HYFI + HN+YLTG Q     S     + L  G R +ELD W    +D   ++ HG  M   +     +++IKE AFV SEYPV+++ E+H +   Q K+++      G++L     E
Sbjct:   58 IEDLFKKINGDKTDYLTVDQLVSFLNEHQRDPRLN-EILFPFYDAKRAMQIIEMYEPDEDLKKQGLISSDGFCRYLMSDENAPVFLDRLELYQEMDHPLAHYFISSSHNTYLTGRQFGGKSSVEMYRQVLLAGCRCVELDCWDGKGEDQEPIITHGKAMCTDILFKDVIQAIKETAFVTSEYPVILSFENHCSKYQQYKMSKYCEDLFGDLLLKQALE 274          
BLAST of DY271211 vs. ExPASy Swiss-Prot
Match: PLCB1_RAT (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-1 OS=Rattus norvegicus GN=Plcb1 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.551e-20
Identity = 60/199 (30.15%), Postives = 107/199 (53.77%), Query Frame = 1
Query:  181 MTVDHLHRFLIEVQKEDKASK--------EDAQAIIDSLRELKHLNIFHRRGLNLEAFFKYLFGDINPPLSPTPV-VHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL-HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEIL 744
            +TVD +  F+   Q++ + ++        E  Q +I+      + ++  +  ++++ F +YL G+ N  +SP  + ++ DM+ P+SHYFI + HN+YLT  QL  + S     + L  G R +ELD W     +   V+ HG TMT  +   + + +I E AF  S +P++++ E+H+ +P  QAK+AE      G+ L
Sbjct:  240 LTVDQMMDFINLKQRDPRLNEILYPPLKQEQVQVLIEKYEP--NSSLAKKGQMSVDGFMRYLSGEENGVVSPEKLDLNEDMSQPLSHYFINSSHNTYLTAGQLAGNSSVEMYRQVLLSGCRCVELDCWKGRTAEEEPVITHGFTMTTEISFKEVIEAIAECAFKTSPFPILLSFENHVDSPKQQAKMAEYCRLIFGDAL 436          
BLAST of DY271211 vs. ExPASy Swiss-Prot
Match: PLCB1_MOUSE (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-1 OS=Mus musculus GN=Plcb1 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.551e-20
Identity = 60/199 (30.15%), Postives = 107/199 (53.77%), Query Frame = 1
Query:  181 MTVDHLHRFLIEVQKEDKASK--------EDAQAIIDSLRELKHLNIFHRRGLNLEAFFKYLFGDINPPLSPTPV-VHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL-HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEIL 744
            +TVD +  F+   Q++ + ++        E  Q +I+      + ++  +  ++++ F +YL G+ N  +SP  + ++ DM+ P+SHYFI + HN+YLT  QL  + S     + L  G R +ELD W     +   V+ HG TMT  +   + + +I E AF  S +P++++ E+H+ +P  QAK+AE      G+ L
Sbjct:  240 LTVDQMMDFINLKQRDPRLNEILYPPLKQEQVQVLIEKYEP--NSSLAKKGQMSVDGFMRYLSGEENGVVSPEKLDLNEDMSQPLSHYFINSSHNTYLTAGQLAGNSSVEMYRQVLLSGCRCVELDCWKGRTAEEEPVITHGFTMTTEISFKEVIEAIAECAFKTSPFPILLSFENHVDSPKQQAKMAEYCRLIFGDAL 436          
BLAST of DY271211 vs. ExPASy Swiss-Prot
Match: PLCB1_BOVIN (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-1 OS=Bos taurus GN=PLCB1 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.551e-20
Identity = 62/200 (31.00%), Postives = 109/200 (54.50%), Query Frame = 1
Query:  181 MTVDHLHRFLIEVQKEDKASK--------EDAQAIIDSLRELKHLNIFHRRG-LNLEAFFKYLFGDINPPLSPTPV-VHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL-HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEIL 744
            +TVD +  F+   Q++ + ++        E  Q +I+   + +  N   ++G ++++ F +YL G+ N  +SP  + ++ DM+ P+SHYFI + HN+YLT  QL  + S     + L  G R +ELD W     +   V+ HG TMT  +   + + +I E AF  S +P++++ E+H+ +P  QAK+AE      G+ L
Sbjct:  240 LTVDQMMDFINLKQRDPRLNEILYPPLKQEQVQVLIE---KYEPNNSLAKKGQISVDGFMRYLSGEENGVVSPEKLDLNEDMSQPLSHYFINSSHNTYLTAGQLAGNSSVEMYRQVLLSGCRCVELDCWKGRTAEEEPVITHGFTMTTEISFKEVIEAIAECAFKTSPFPILLSFENHVDSPKQQAKMAEYCRLIFGDAL 436          
The following BLAST results are available for this feature:
BLAST of DY271211 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
PLCH2_MOUSE3.844e-2135.151-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCZ1_HUMAN5.020e-2132.061-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCH2_HUMAN1.908e-2033.501-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLC_DICDI2.492e-2033.131-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCB1_HUMAN2.492e-2031.501-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCB4_HUMAN4.250e-2029.361-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCB4_BOVIN5.551e-2029.361-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCB1_RAT5.551e-2030.151-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCB1_MOUSE5.551e-2030.151-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCB1_BOVIN5.551e-2031.001-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YD16FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271211 ID=DY271211; Name=DY271211; organism=Citrus clementina; type=EST; length=946bp
CAAAACATTTTCAACATTCCCATCACTTTCACAGATTACCCTTTACTCAA
TCACGCGTTTGTCATGTCTAAACAGACTTACAGAGTCTGCTTCTGCTTCC
GGCGGCGGTTCCACGTCGCCGCATCGGAGGCGCCGGACGCCGTCAAGTCC
ATGTTCGATCAGTACTCCGAGAATGGCACCATGACGGTCGATCACCTTCA
CCGCTTCTTGATCGAGGTTCAGAAAGAAGATAAAGCCTCCAAAGAAGACG
CGCAAGCGATCATCGATAGCTTGCGCGAGCTCAAGCACCTGAATATCTTT
CATCGCAGGGGCCTCAATCTTGAAGCTTTCTTTAAGTACCTCTTCGGTGA
TATTAATCCTCCGCTTTCGCCTACTCCAGTGGTGCATCATGATATGACTG
CCCCGGTGTCTCATTACTTTATATATACTGGCCACAATTCCTATCTGACT
GGTAATCAGCTTAATAGTGACTGCAGCGACGTTCCCATCATACGTGCCCT
GCAGAAAGGGGTGAGAGTGATTGAGTTGGATATATGGCCAAATTCGAAGA
AAGATAATGTGGATGTTCTTCATGGAGGGACAATGACTGCTCCAGTGGAA
CTCATCAAATGTTTGAGGTCTATCAAAGAATATGCCTTTGTTGCATCTGA
GTATCCAGTTGTTATTACCCTAGAAGATCACCTTACTCCAGATCTTCAGG
CTAAAGTGGCTGAGATGGTCACTCAAACGTTGGGAGAAATCCTGTTTACC
CCTGGCTCAGAATGCTAAAAGGAATTCCCCTCCCCGGATCACTGAAAAGA
CGGATCATCATTCCACCCAAACCGCCAAGGAATACCTTGAGGCCAAAAAA
GAAAGGAAAAAAAAAAACATTCCAAAAAGGGTAAAGGGTTCCCTGAAGAA
AAACCCTGGGGAAAAAAAGTCCCCCACCTTAAAACCCTAAAAAAAA
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