DY271211

Overview
NameDY271211
Unique NameDY271211
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length946
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271211 vs. ExPASy Swiss-Prot
Match: PIPA_DROME (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase OS=Drosophila melanogaster GN=norpA PE=1 SV=4)

HSP 1 Score: 90.5077 bits (223), Expect = 1.512e-17
Identity = 52/162 (32.10%), Postives = 86/162 (53.09%), Query Frame = 1
Query:  313 LNLEAFFKYLFGDINPPLSPTPV-VHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL-HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC*KEFPSPDH 792
            ++L+ F +YL  D N P+    +  + +M  P++HY+I + HN+YL+G Q+    S     + L  G R +ELD W    +D   ++ HG      +    C+++I + AFV+SEYPV+++ E+H     Q K+A+      G++L        KE P PDH
Sbjct:  293 MSLDGFKRYLMSDENAPVFLDRLDFYMEMDQPLAHYYINSSHNTYLSGRQIGGKSSVEMYRQTLLAGCRCVELDCWNGKGEDEEPIVTHGHAYCTEILFKDCIQAIADCAFVSSEYPVILSFENHCNRAQQYKLAKYCDDFFGDLLL-------KE-PLPDH 446          
BLAST of DY271211 vs. ExPASy Swiss-Prot
Match: PLCH1_MOUSE (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase eta-1 OS=Mus musculus GN=Plch1 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.578e-17
Identity = 62/208 (29.81%), Postives = 107/208 (51.44%), Query Frame = 1
Query:  181 MTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFHRRGLNLEAFFKYLFG---DINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEM---VTQTLGEILFTPGSEC*KEFPSP 786
            +TV+ L +FL   QK    + +    II      +   +  +  L +E F  ++     D+  PL     V+ DM  P+ +Y+I + HN+YLTG+QL S        R LQ+G R +E+D W     + V V HG T+T+ +     + +I ++AFV +E+PV++++E+H +   Q K+A+    + Q   ++      EC ++ PSP
Sbjct:  231 LTVEELAQFLKVEQKMSNVTLDYCLDIIMKFEVSEENKV--KNVLGIEGFTNFMRSPACDVFNPLHHE--VYQDMDQPLCNYYIASSHNTYLTGDQLLSQSKVDMYARVLQEGCRCVEVDCWDGPDGEPV-VHHGYTLTSKILFRDVVETINKHAFVKNEFPVILSIENHCSIQQQRKIAQYLKGILQDKLDLSSVDTGEC-RQLPSP 432          
BLAST of DY271211 vs. ExPASy Swiss-Prot
Match: PLCE1_RAT (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase epsilon-1 OS=Rattus norvegicus GN=Plce1 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.723e-16
Identity = 60/206 (29.13%), Postives = 103/206 (50.00%), Query Frame = 1
Query:  196 LHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFHRRGLNLEAFFKYLFGDIN--PPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL-HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGE-----ILFTPGSEC*KEFPSPD 789
            L+ FL+  Q E   + ++  +II       ++++ H+  L+ E F ++L    N       +     D+  P+S+Y+I + HN+YLTG+QL  + S     + L +G R IELD W     D + ++ HG T+T  +   + + +I   AF+ S+ P++I++E+H +   Q K+AE+     GE      LF          PSPD
Sbjct: 1310 LNDFLVNCQGEH-CTYDEILSIIQKFEP--NISMCHQGLLSFEGFARFLMDKDNFASKNDESRENKKDLQLPLSYYYIESSHNTYLTGHQLKGESSVELYSQVLLQGCRSIELDCWDGD--DGMPIIYHGHTLTTKIPFKEVVEAIDRSAFITSDLPIIISIENHCSLPQQRKMAEIFKSVFGEKLVAKFLFETDFSDDPMLPSPD 1510          
BLAST of DY271211 vs. ExPASy Swiss-Prot
Match: PLC1_YEAST (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase 1 OS=Saccharomyces cerevisiae GN=PLC1 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.723e-16
Identity = 48/128 (37.50%), Postives = 75/128 (58.59%), Query Frame = 1
Query:  403 PVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC*KEFPSP 786
            P++HYFI + HN+YL G Q+    S    I+ LQ+G R +E+DIW     +N  V+  G +T+ + L   +R IK+YAF+ S YP++I+LE +   D Q   + ++ + L E L+  G+   K  PSP
Sbjct:  385 PLNHYFIASSHNTYLLGKQIAETPSVEGYIQVLQQGCRCVEIDIWDG---ENGPVVCHGFLTSAIPLKTVIRVIKKYAFITSPYPLIISLEINCNKDNQKLASLIMREVLAEQLYFVGTRTDK-LPSP 508          
BLAST of DY271211 vs. ExPASy Swiss-Prot
Match: PLCE1_MOUSE (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase epsilon-1 OS=Mus musculus GN=Plce1 PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 2.413e-15
Identity = 59/206 (28.64%), Postives = 102/206 (49.51%), Query Frame = 1
Query:  196 LHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFHRRGLNLEAFFKYLFGDIN--PPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL-HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGE-----ILFTPGSEC*KEFPSPD 789
            L+ FL+  Q E   + ++  +II        +++ H+  L+ E F ++L    N       +     ++  P+S+Y+I + HN+YLTG+QL  + S     + L +G R IELD W     D + ++ HG T+T  +   + + +I   AF+ S+ P++I++E+H +   Q K+AE+     GE      LF          PSPD
Sbjct: 1310 LNDFLVNCQGEH-CTYDEILSIIQKFEP--SVSMCHQGLLSFEGFARFLMDKDNFASKNDESRENKKELQLPLSYYYIESSHNTYLTGHQLKGESSVELYSQVLLQGCRSIELDCWDGD--DGMPIIYHGHTLTTKIPFKEVVEAIDRSAFITSDLPIIISIENHCSLPQQRKMAEIFKSVFGEKLVAKFLFETDFSDDPMLPSPD 1510          
BLAST of DY271211 vs. ExPASy Swiss-Prot
Match: PLCE1_HUMAN (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase epsilon-1 OS=Homo sapiens GN=PLCE1 PE=1 SV=3)

HSP 1 Score: 82.0333 bits (201), Expect = 5.376e-15
Identity = 53/188 (28.19%), Postives = 98/188 (52.13%), Query Frame = 1
Query:  196 LHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFHRRGLNLEAFFKYLFGDINPPLSPTPVVHH--DMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL-HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFT 750
            L+ FL+  Q E   + ++  +II        +++ H+  ++ E F ++L    N          +  ++  P+S+Y+I + HN+YLTG+QL  + S     + L +G R +ELD W     D + ++ HG T+T  +   + + +I   AF+ S+ P++I++E+H +   Q K+AE+     GE L T
Sbjct: 1329 LNDFLVNCQGEH-CTYDEILSIIQKFEP--SISMCHQGLMSFEGFARFLMDKENFASKNDESQENIKELQLPLSYYYIESSHNTYLTGHQLKGESSVELYSQVLLQGCRSVELDCWDGD--DGMPIIYHGHTLTTKIPFKEVVEAIDRSAFINSDLPIIISIENHCSLPQQRKMAEIFKTVFGEKLVT 1511          
BLAST of DY271211 vs. ExPASy Swiss-Prot
Match: PLCL1_HUMAN (Inactive phospholipase C-like protein 1 OS=Homo sapiens GN=PLCL1 PE=1 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 9.170e-15
Identity = 51/148 (34.46%), Postives = 76/148 (51.35%), Query Frame = 1
Query:  313 LNLEAFFKYLFGDINPPLSPTPV-VHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL-HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFT 750
            L ++ F +YL         P    V  DMT P+SHY+I   HN+YL  +Q          IRAL+ G R +ELD+   S  DN  +L +   MT  V     +  I ++AFVASEYP+++ L +H +   Q  +A+ + +  G  L+T
Sbjct:  372 LAIDGFTQYLLSSECDIFDPEQKKVAQDMTQPLSHYYINASHNTYLIEDQFRGPADINGYIRALKMGCRSVELDVSDGS--DNEPILCNRNNMTTHVSFRSVIEVINKFAFVASEYPLILCLGNHCSLPQQKVMAQQMKKVFGNKLYT 517          
BLAST of DY271211 vs. ExPASy Swiss-Prot
Match: PLCL1_MOUSE (Inactive phospholipase C-like protein 1 OS=Mus musculus GN=Plcl1 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 1.198e-14
Identity = 56/168 (33.33%), Postives = 86/168 (51.19%), Query Frame = 1
Query:  313 LNLEAFFKYLFG---DINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL-HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC*KEF-PSPDH*KD 801
            L ++ F +YL     DI  P      V  DMT P+SHY+I   HN+YL  +Q          +RAL+ G R IELD+  +   DN  +L +   M   +     L  I ++AFVASEYP+++ L +H +   Q  +A+ + +  GE L+T      + + PSP+  K+
Sbjct:  373 LAIDGFTQYLLSPECDIFDPEQKK--VAQDMTQPLSHYYINASHNTYLIEDQFRGPADINGYVRALKMGCRSIELDV--SDGPDNEPILCNRNNMAMHLSFRSVLEVINKFAFVASEYPLILCLGNHCSLPQQKVMAQQMKKVFGEKLYTEAPLSSESYLPSPEKLKN 536          
BLAST of DY271211 vs. ExPASy Swiss-Prot
Match: PLCL1_RAT (Inactive phospholipase C-like protein 1 OS=Rattus norvegicus GN=Plcl1 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.259e-13
Identity = 53/164 (32.32%), Postives = 82/164 (50.00%), Query Frame = 1
Query:  313 LNLEAFFKYLFG---DINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVL-HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC*KEF-PSPD 789
            L ++ F +YL     DI  P      V  DMT P+SHY+I   HN+YL  +Q          +RAL+ G R IELD+  +   DN  +L +   M   +     L  I ++AFVASEYP+++ L +H +   Q  + + + +  G  L+T      + + PSP+
Sbjct:  373 LAIDGFTQYLLSPECDIFDPEQKK--VAQDMTQPLSHYYINASHNTYLIEDQFRGPADINGYVRALKMGCRSIELDV--SDGPDNEPILCNRNNMAMLLSFRSVLEVINKFAFVASEYPLILCLGNHCSLPQQRVMVQQMKKVFGNKLYTEAPLSSESYLPSPE 532          
The following BLAST results are available for this feature:
BLAST of DY271211 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
PIPA_DROME1.512e-1732.101-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCH1_MOUSE2.578e-1729.811-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCE1_RAT3.723e-1629.131-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLC1_YEAST3.723e-1637.501-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCE1_MOUSE2.413e-1528.641-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCE1_HUMAN5.376e-1528.191-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCL1_HUMAN9.170e-1534.46Inactive phospholipase C-like protein 1 OS=Homo sa... [more]
PLCL1_MOUSE1.198e-1433.33Inactive phospholipase C-like protein 1 OS=Mus mus... [more]
PLCL1_RAT2.259e-1332.32Inactive phospholipase C-like protein 1 OS=Rattus ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAP9YD16FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271211 ID=DY271211; Name=DY271211; organism=Citrus clementina; type=EST; length=946bp
CAAAACATTTTCAACATTCCCATCACTTTCACAGATTACCCTTTACTCAA
TCACGCGTTTGTCATGTCTAAACAGACTTACAGAGTCTGCTTCTGCTTCC
GGCGGCGGTTCCACGTCGCCGCATCGGAGGCGCCGGACGCCGTCAAGTCC
ATGTTCGATCAGTACTCCGAGAATGGCACCATGACGGTCGATCACCTTCA
CCGCTTCTTGATCGAGGTTCAGAAAGAAGATAAAGCCTCCAAAGAAGACG
CGCAAGCGATCATCGATAGCTTGCGCGAGCTCAAGCACCTGAATATCTTT
CATCGCAGGGGCCTCAATCTTGAAGCTTTCTTTAAGTACCTCTTCGGTGA
TATTAATCCTCCGCTTTCGCCTACTCCAGTGGTGCATCATGATATGACTG
CCCCGGTGTCTCATTACTTTATATATACTGGCCACAATTCCTATCTGACT
GGTAATCAGCTTAATAGTGACTGCAGCGACGTTCCCATCATACGTGCCCT
GCAGAAAGGGGTGAGAGTGATTGAGTTGGATATATGGCCAAATTCGAAGA
AAGATAATGTGGATGTTCTTCATGGAGGGACAATGACTGCTCCAGTGGAA
CTCATCAAATGTTTGAGGTCTATCAAAGAATATGCCTTTGTTGCATCTGA
GTATCCAGTTGTTATTACCCTAGAAGATCACCTTACTCCAGATCTTCAGG
CTAAAGTGGCTGAGATGGTCACTCAAACGTTGGGAGAAATCCTGTTTACC
CCTGGCTCAGAATGCTAAAAGGAATTCCCCTCCCCGGATCACTGAAAAGA
CGGATCATCATTCCACCCAAACCGCCAAGGAATACCTTGAGGCCAAAAAA
GAAAGGAAAAAAAAAAACATTCCAAAAAGGGTAAAGGGTTCCCTGAAGAA
AAACCCTGGGGAAAAAAAGTCCCCCACCTTAAAACCCTAAAAAAAA
back to top