DY271230
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY271230 vs. ExPASy Swiss-Prot
Match: AG_SOLLC (Floral homeotic protein AGAMOUS OS=Solanum lycopersicum GN=AG1 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.778e-33 Identity = 74/152 (48.68%), Postives = 112/152 (73.68%), Query Frame = 3 Query: 135 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGN-WTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 587 +GRG++++KRIEN NRQVTF KRR+GLLKKA+E+SVLCDAEVAL+VFS +G+L+EY+ +S ++ +ERY++ C ++ + E N + E SKL+A++ L ++ MGE LA + LKEL+++EQ+I+ G+ IRS+KN+L+ I Sbjct: 17 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSNRGRLYEYANNS-VKATIERYKKAC-SDSSNTGSVSEANAQYYQQEASKLRAQIGNLMNQNRNMMGEALAGMKLKELKNLEQRIEKGISKIRSKKNELLFAEI 166
BLAST of DY271230 vs. ExPASy Swiss-Prot
Match: AG_PANGI (Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 5.174e-33 Identity = 71/152 (46.71%), Postives = 112/152 (73.68%), Query Frame = 3 Query: 135 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGN-WTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 587 +GRG++++KRIEN NRQVTF KRR+GLLKKA+E+SVLCDAEVALIVFST+G+L+EY+ +S ++ +ERY++ C + ++ E N + E SKL+ + +Q+N ++ MGE L L++++L+ +E +++ G+ IRS+KN+L+ I Sbjct: 17 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANNS-VKGTIERYKKAC-TDSPNTSSVSEANAQFYQQEASKLRQEISSIQKNNRNMMGESLGSLTVRDLKGLETKLEKGISRIRSKKNELLFAEI 166
BLAST of DY271230 vs. ExPASy Swiss-Prot
Match: AGL11_ARATH (Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana GN=AGL11 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 5.174e-33 Identity = 69/151 (45.70%), Postives = 109/151 (72.19%), Query Frame = 3 Query: 135 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 587 MGRG++++KRIEN NRQVTF KRR+GLLKKA+E+SVLCDAEVALIVFST+G+L+EY+ ++ + +ERY++ C + + E +KL+ +++ +Q + ++ MG+ L+ LS+KEL+ VE +++ + IRS+K++L+L I Sbjct: 1 MGRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANNN-IRSTIERYKKACSDSTNTSTVQEINAAYYQQESAKLRQQIQTIQNSNRNLMGDSLSSLSVKELKQVENRLEKAISRIRSKKHELLLVEI 150
BLAST of DY271230 vs. ExPASy Swiss-Prot
Match: AGL1_ARATH (Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana GN=AGL1 PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.966e-32 Identity = 69/152 (45.39%), Postives = 112/152 (73.68%), Query Frame = 3 Query: 135 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGN-WTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 587 +GRG++++KRIEN NRQVTF KRR+GLLKKA+E+SVLCDAEVAL++FST+G+L+EY+ +S + +ERY++ C ++ + E N + E SKL+ ++ +Q + +H +GE L L+ KEL+++E +++ G+ +RS+KN+L++ I Sbjct: 16 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANNS-VRGTIERYKKAC-SDAVNPPSVTEANTQYYQQEASKLRRQIRDIQNSNRHIVGESLGSLNFKELKNLEGRLEKGISRVRSKKNELLVAEI 165
BLAST of DY271230 vs. ExPASy Swiss-Prot
Match: MAD21_ORYSJ (MADS-box transcription factor 21 OS=Oryza sativa subsp. japonica GN=MADS21 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.664e-31 Identity = 66/153 (43.14%), Postives = 111/153 (72.55%), Query Frame = 3 Query: 135 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGN--WTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 587 MGRG++++KRIENK +RQVTF KRR+GLLKKA+E+++LCDAE+ALIVFS++G+L+E+S + +ERY++ A A I+ N + + E +K++ +++ LQ +H +GE + +++ KEL+S+E +++ G+ IRS+K++L+ I Sbjct: 1 MGRGKIEIKRIENKTSRQVTFCKRRNGLLKKAYELAILCDAEIALIVFSSRGRLYEFSNVNSTRSTIERYKK-ASASTSGSAPVIDVNSHQYFQQEAAKMRHQIQTLQNANRHLIGESIGNMTAKELKSLENRLEKGISRIRSKKHELLFSEI 152
BLAST of DY271230 vs. ExPASy Swiss-Prot
Match: AGL5_ARATH (Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana GN=AGL5 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 3.708e-31 Identity = 67/152 (44.08%), Postives = 110/152 (72.37%), Query Frame = 3 Query: 135 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGN-WTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 587 +GRG++++KRIEN NRQVTF KRR+GLLKKA+E+SVLCDAEVAL++FST+G+L+EY+ +S + +ERY++ C ++ E N + E SKL+ ++ +Q +H +GE L L+ KEL+++E +++ G+ +RS+K+++++ I Sbjct: 16 IGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANNS-VRGTIERYKKAC-SDAVNPPTITEANTQYYQQEASKLRRQIRDIQNLNRHILGESLGSLNFKELKNLESRLEKGISRVRSKKHEMLVAEI 165
BLAST of DY271230 vs. ExPASy Swiss-Prot
Match: MAD27_ORYSJ (MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica GN=MADS27 PE=2 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 4.842e-31 Identity = 66/151 (43.71%), Postives = 108/151 (71.52%), Query Frame = 3 Query: 135 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 587 MGRG++ ++RI+N +RQVTFSKRR+G+ KKA E+++LCDAEV L++FS+ G+L+EYS+ S M+ +++RY + E+Q AN W E + L+ ++ LQ N + MGEDL+ L++KELQS+E Q++ L+ +R++K+ +++ I Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEYSSTS-MKSVIDRYGK-SKDEQQAVANPNSELKFWQREAASLRQQLHNLQENHRQLMGEDLSGLNVKELQSLENQLEISLRSVRTKKDHVLIDEI 149
BLAST of DY271230 vs. ExPASy Swiss-Prot
Match: M17_MAIZE (MADS-box protein ZMM17 OS=Zea mays GN=M17 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.840e-30 Identity = 67/151 (44.37%), Postives = 104/151 (68.87%), Query Frame = 3 Query: 135 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 587 MGRG++++KRIEN NRQVTFSKRR GLLKKA+E++VLCDA V +++FS+ GK+FEY + +C R E E+Y +A EI + LE +++K ME L+ + + G+DL+ L+L ++ +EQQ++ + +R+RK+QL+ Q + Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPACSLR--ELIEQYQHATNS-HFEEINHDQQILLEMTRMKNEMEKLETGIRRYTGDDLSSLTLDDVSDLEQQLEYSVSKVRARKHQLLNQQL 148
BLAST of DY271230 vs. ExPASy Swiss-Prot
Match: AGL15_BRANA (Agamous-like MADS-box protein AGL15 OS=Brassica napus GN=AGL15 PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 4.099e-30 Identity = 75/151 (49.67%), Postives = 99/151 (65.56%), Query Frame = 3 Query: 135 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 587 MGRG++++KRIEN +RQVTFSKRR+GLLKKAHE+SVLCDAEVA+IVFS GKLFE+S+ S M++ L RY Y + N N E LK + +LQ H G+ L LSLKELQ +E+Q++ L +R RK L+ + + Sbjct: 1 MGRGKIEIKRIENANSRQVTFSKRRAGLLKKAHELSVLCDAEVAVIVFSKSGKLFEFSSTS-MKKTLLRYGNYQISSDVPGINCKTENQEECTEVDLLKDEISMLQEKHLHMQGKPLNLLSLKELQHLEKQLNFSLISVRERKELLLTKQL 150
BLAST of DY271230 vs. ExPASy Swiss-Prot
Match: AGL21_ARATH (Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana GN=AGL21 PE=1 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 5.354e-30 Identity = 69/153 (45.10%), Postives = 106/153 (69.28%), Query Frame = 3 Query: 135 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQL--QANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 587 MGRG++ ++RI++ +RQVTFSKRR GL+KKA E+++LCDAEV LI+FS+ GKL+++++ S M+ +++RY + ++QL A+E++ W E + L+ + LQ N + MGE L LS+ EL S+E QI+ L+ IR RK QL+ Q I Sbjct: 1 MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASSS-MKSVIDRYNKSKIEQQQLLNPASEVK---FWQREAAVLRQELHALQENHRQMMGEQLNGLSVNELNSLENQIEISLRGIRMRKEQLLTQEI 149 The following BLAST results are available for this feature:
BLAST of DY271230 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271230 ID=DY271230; Name=DY271230; organism=Citrus clementina; type=EST; length=1063bpback to top |