DY271265

Overview
NameDY271265
Unique NameDY271265
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1060
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY271265 vs. ExPASy Swiss-Prot
Match: AQP_ENCCU (Aquaporin OS=Encephalitozoon cuniculi GN=AQP PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 7.269e-11
Identity = 49/168 (29.17%), Postives = 78/168 (46.43%), Query Frame = 1 
Query:  295 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVA-CLLLKFVTNGQTTSAFALS---SGVGAWNAVVF--EIVMTFGLVYTVYATALDPKKGSLGT-----------------IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVHWVG 729
            +++  H NPA+T  A +   + +LRGI Y +AQ +G  +A C LL     G   +   +    S  G  N  VF  E  +T  LV+  +ATA++P K    T                  AP+ IG  +G     G A  G + NP ++  P ++S +W++ W ++ G
Sbjct:   62 DVTVAHFNPAITLAAILTCKLGVLRGIGYIVAQYIGFILAVCALLPCSPVGYKETLNIIRPTPSPFGGDNLNVFFTEFFLTAILVHVAFATAVNPYKPKTDTEGKFVDPDEEEPVDRRITAPLCIGLTLGFLAFLGLASSGGAFNPGLTLAPVIMSNTWNHFWAYFAG 229
[Close]
BLAST of DY271265 vs. ExPASy Swiss-Prot
Match: AQPZ_BRAJA (Aquaporin Z OS=Bradyrhizobium japonicum GN=aqpZ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 9.494e-11
Identity = 54/162 (33.33%), Postives = 74/162 (45.68%), Query Frame = 1 
Query:  295 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNG----QTTSAFALSSGVGAWN--------AVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV--SWSWDNHWVHWVGPLI 738
            +ISG H+NPAVT G   GG     + + Y IAQ+ G+ VA  LL  + +G      T  FA S+G  A +          + E+VMT   ++ +               AP+AIG  +    L        S+NPA S GPAL    W+    W+ WV PLI
Sbjct:   57 HISGCHLNPAVTVGLAAGGRFPAGQILPYVIAQVCGAIVAAELLYIIASGAPGFDVTKGFA-SNGYDAHSPGQYSMMACFLTEVVMTMMFLFIIMGATHGRAPAG---FAPLAIGLALVMIHLVSIPVTNTSVNPARSTGPALFVGGWAMAQLWLFWVAPLI 214
The following BLAST results are available for this feature:
BLAST of DY271265 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
AQP_ENCCU7.269e-1129.17Aquaporin OS=Encephalitozoon cuniculi GN=AQP PE=3 ... [more]
AQPZ_BRAJA9.494e-1133.33Aquaporin Z OS=Bradyrhizobium japonicum GN=aqpZ PE... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YG11FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271265 ID=DY271265; Name=DY271265; organism=Citrus clementina; type=EST; length=1060bp
CACTTACGTGAACTAGTAGTAATCACACCCCAAAGGTTCAATCTTCATCG
TTTGATCTCCATCATGCCGATCAGAAACATTGCCGTTGGCCATCCCCGTG
AGGCGACTCATCCAGATGCCCTAAGGGCAGCCCTAGCAGAGTTCATCTCA
ACTCTAATATTTGTCTTTGCCGGTGAAGGCTCGGGCATGGCCTTCAACAA
GCTCACTCACAACGGCGCCAACACCCCCTCCGGCCTCGTCGCCGCCTCTG
TTGCTCACGCTTTCGCCCTTTTCGTTGCTGTCGCCGTTGGCGCCAACATT
TCCGGTGGCCACGTTAATCCTGCTGTCACCTTTGGCGCCTTCGTTGGAGG
TAACATCTCCCTTCTACGAGGCATCCTCTACTGGATCGCCCAGCTTCTTG
GATCCACCGTCGCATGCTTGCTTCTTAAGTTCGTTACCAACGGCCAGACC
ACATCTGCTTTTGCTCTCTCATCTGGAGTTGGTGCATGGAACGCAGTCGT
TTTCGAGATCGTGATGACATTCGGACTAGTGTACACAGTGTATGCCACAG
CCCTGGACCCAAAGAAGGGAAGCTTGGGGACAATTGCACCAATTGCAATT
GGTTTCATTGTAGGAGCCAACATCTTGGCGGGCGGGGCGTTTGATGGAGC
TTCAATGAACCCAGCAGTGTCATTCGGGCCAGCTTTGGTAAGCTGGAGCT
GGGACAACCACTGGGTCCACTGGGTCGGGCCCCTCATCGGTGGTGGGCTA
ACTGGGCTCTCCACAAATTTCTTCTTCTTAACCAGTCTCACAAGCAGCTC
CCAACACCCAATTACTAAGCTAAAAGCTTTGCACCTAGGTGAATTTTGCA
GCGGATGGTTTGTTTAAATTTTGTTTTACCCGAAGGTTTTTCCCTTTTAT
TTTCAAATTGTGTTTCAATTCAAGGGGCCGTGGACCCCGGTTCCCTCCAA
CCCTAACCTTGTCGGATTTTTGTTACACCTACTAATTGTTCATATCTTCG
CGAAGGGCTTTGATTTTTCTACCTCCCATCAAAATATTCCTTTATGCTAT
TAATAATATA
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