DY271265

Overview
NameDY271265
Unique NameDY271265
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1060
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271265 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.365e-25
Identity = 70/208 (33.65%), Postives = 108/208 (51.92%), Query Frame = 1
Query:  124 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVG---AWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVHWVGPLI 738
            +A  AEF++ LIFV    GS + +    +     P                      +ISGGH+NPAVT        IS+ + + Y  AQ LG+ +   +L  VT         +++  G   A + ++ E+++TF LV+T++A+    +    G+IA +AIGF V    L    + GASMNPA SFGPA++  +W+NHW++WVGP+I
Sbjct:   39 KAVTAEFLAMLIFVLLSVGSTINWGGSENP---LPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPNVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPII 242          
BLAST of DY271265 vs. ExPASy Swiss-Prot
Match: AQP1_BOVIN (Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3)

HSP 1 Score: 117.472 bits (293), Expect = 1.365e-25
Identity = 71/210 (33.81%), Postives = 110/210 (52.38%), Query Frame = 1
Query:  124 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXX--NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAF---ALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVHWVGPLI 738
            RA +AEF++ ++F+F   GS + F+    +   T +                       +ISG H+NPAVT G  +   IS+LR I+Y IAQ +G+ VA  +L  +T+    ++    AL+ GV +   +  EI+ T  LV  V AT  D ++  LG   P+AIGF V    L    + G  +NPA SFG ++++ ++ +HW+ WVGP I
Sbjct:   12 RAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATT-DRRRRDLGGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITHNFQDHWIFWVGPFI 220          
BLAST of DY271265 vs. ExPASy Swiss-Prot
Match: PIP27_MAIZE (Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.782e-25
Identity = 81/231 (35.06%), Postives = 116/231 (50.22%), Query Frame = 1
Query:   94 PREATHPDALRAALAEFISTLIFVFAGEGSGMAFN-----KLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQ----LLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVHWVGPLI 738
            P E T     RAA+AEFI+TL+F++    + + +      K+  N                            ISGGH+NPAVTFG F+G  +SL+R +LY IAQ    + G+ +A    K   N        +S G     A+  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA     G  +NPA SFGPA++     +WD+ W++WVGP +
Sbjct:   30 PDELTKWSLYRAAIAEFIATLLFLYITVLTIIGYKRQSDTKIPGNTECDGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLVRALLYMIAQCAGAICGAGLAKGFQKSFYNRYGGGVNTVSDGYNKGTALGAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGPAVIFNNDKAWDDQWIYWVGPFV 259          
BLAST of DY271265 vs. ExPASy Swiss-Prot
Match: PIP26_ARATH (Probable aquaporin PIP2-6 OS=Arabidopsis thaliana GN=PIP2-6 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.782e-25
Identity = 83/239 (34.73%), Postives = 115/239 (48.12%), Query Frame = 1
Query:   67 PIRNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTH----NGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVT----NGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVHWVGPLI 738
            P++   V   RE       RA +AEFI+TL+F++    + + F   T      GA                          ISGGH+NPAVTFG F+   +SL+R + Y +AQ LG+T    L+K       N     A  LS G      V  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA     G  +NPA SFG A++     +WD+ W+ WVGP +
Sbjct:   22 PVKTFEV---RELKKWSFYRAVIAEFIATLLFLYVTVLTVIGFKSQTDINAGGGACASVGLLGISWAFGGMIFILVYCTAGISGGHINPAVTFGLFLASKVSLVRAVSYMVAQCLGATCGVGLVKVFQSTYYNRYGGGANMLSDGYNVGVGVGAEIIGTFVLVYTVF-SATDPKRNARDSHIPVLAPLPIGFSVFMVHLATIPITGTGINPARSFGAAVIYNNQKAWDDQWIFWVGPFV 256          
BLAST of DY271265 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.782e-25
Identity = 69/208 (33.17%), Postives = 108/208 (51.92%), Query Frame = 1
Query:  124 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVG---AWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVHWVGPLI 738
            +A  AEF++ LIFV    GS + +    +     P                      +ISGGH+NPAVT        IS+ + + Y  AQ LG+ +   +L  VT         +++  G   A + ++ E+++TF LV+T++A+    +    G++A +AIGF V    L    + GASMNPA SFGPA++  +W+NHW++WVGP+I
Sbjct:   36 KAVTAEFLAMLIFVLLSVGSTINWGGSENP---LPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSVA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPII 239          
BLAST of DY271265 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.782e-25
Identity = 70/208 (33.65%), Postives = 108/208 (51.92%), Query Frame = 1
Query:  124 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVG---AWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVHWVGPLI 738
            +A  AEF++ LIFV    GS + +    +     P                      +ISGGH+NPAVT        IS+ + + Y  AQ LG+ +   +L  VT         +++  G   A + ++ E+++TF LV+T++A+    +    G+IA +AIGF V    L    + GASMNPA SFGPA++  +W+NHW++WVGP+I
Sbjct:   36 KAVTAEFLAMLIFVLLSLGSTINWGGKENP---LPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPII 239          
BLAST of DY271265 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 2.328e-25
Identity = 73/212 (34.43%), Postives = 107/212 (50.47%), Query Frame = 1
Query:  124 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANT----PSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVG---AWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVHWVGPLI 738
            +A  AEF++ LIFV    GS       T N   T    P                      +ISGGH+NPAVT        IS+ + + Y  AQ LG+ +   +L  VT         ++   G   A + ++ E+++TF LV+T++A+    +    G+IA +AIGF V    L    + GASMNPA SFGPA++  +W+NHW++WVGP+I
Sbjct:   36 KAVTAEFLAMLIFVLLSLGS-------TINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPII 239          
BLAST of DY271265 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 3.040e-25
Identity = 79/232 (34.05%), Postives = 115/232 (49.57%), Query Frame = 1
Query:  100 EATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXX------NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK------FVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVHWVGPLI 738
            E T     RA +AEF++TL+F++    + + +   T   A+ P                             +SGGH+NPAVTFG F+   +SL+R +LY +AQ LG+     L+K      +V  G    A  LS+G      +  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA     G  +NPA S G A++     +WD+HW+ WVGP I
Sbjct:   29 ELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKGFQSAFYVRYG--GGANELSAGYSKGTGLAAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNNDKAWDDHWIFWVGPFI 257          
BLAST of DY271265 vs. ExPASy Swiss-Prot
Match: PIP1_ATRCA (Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 3.040e-25
Identity = 77/216 (35.65%), Postives = 111/216 (51.39%), Query Frame = 1
Query:  124 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTT----SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVHWVGPLI 738
            RAA+AEFI+TL+F++    + + + K T   A+                         ISGGH+NPAVTFG F+   +SLLR ++Y IAQ  G+     L+K    G        A +++ G     A   E++ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA     G  +NPA SFG A++      WD+HW+ WVGP +
Sbjct:   40 RAAIAEFIATLLFLYITVATVIGYKKETDPCASV--GLLGIAWSFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLLRALVYMIAQCAGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTAFGAELIGTFVLVYTVF-SATDPKRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKKRVWDDHWIFWVGPFV 252          
BLAST of DY271265 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.970e-25
Identity = 82/232 (35.34%), Postives = 114/232 (49.14%), Query Frame = 1
Query:  100 EATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXX------NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK------FVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVHWVGPLI 738
            E T     RA +AEFI+TL+F++    + + +   T   A+ P                             ISGGH+NPAVTFG F+   +SL+R +LY IAQ LG+     L+K      +V  G    A  LS G      +  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA     G  +NPA S G A++     +WD+ W+ WVGPLI
Sbjct:   33 ELTQWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSAYYVRYG--GGANELSDGYSKGTGLAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWIFWVGPLI 261          
The following BLAST results are available for this feature:
BLAST of DY271265 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
AQP4_NOTAL1.365e-2533.65Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1[more]
AQP1_BOVIN1.365e-2533.81Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3[more]
PIP27_MAIZE1.782e-2535.06Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1[more]
PIP26_ARATH1.782e-2534.73Probable aquaporin PIP2-6 OS=Arabidopsis thaliana ... [more]
AQP4_RAT1.782e-2533.17Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1[more]
AQP4_DIPME1.782e-2533.65Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=... [more]
AQP4_HUMAN2.328e-2534.43Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2[more]
PIP25_MAIZE3.040e-2534.05Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1[more]
PIP1_ATRCA3.040e-2535.65Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1[more]
PIP24_MAIZE3.970e-2535.34Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YG11FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271265 ID=DY271265; Name=DY271265; organism=Citrus clementina; type=EST; length=1060bp
CACTTACGTGAACTAGTAGTAATCACACCCCAAAGGTTCAATCTTCATCG
TTTGATCTCCATCATGCCGATCAGAAACATTGCCGTTGGCCATCCCCGTG
AGGCGACTCATCCAGATGCCCTAAGGGCAGCCCTAGCAGAGTTCATCTCA
ACTCTAATATTTGTCTTTGCCGGTGAAGGCTCGGGCATGGCCTTCAACAA
GCTCACTCACAACGGCGCCAACACCCCCTCCGGCCTCGTCGCCGCCTCTG
TTGCTCACGCTTTCGCCCTTTTCGTTGCTGTCGCCGTTGGCGCCAACATT
TCCGGTGGCCACGTTAATCCTGCTGTCACCTTTGGCGCCTTCGTTGGAGG
TAACATCTCCCTTCTACGAGGCATCCTCTACTGGATCGCCCAGCTTCTTG
GATCCACCGTCGCATGCTTGCTTCTTAAGTTCGTTACCAACGGCCAGACC
ACATCTGCTTTTGCTCTCTCATCTGGAGTTGGTGCATGGAACGCAGTCGT
TTTCGAGATCGTGATGACATTCGGACTAGTGTACACAGTGTATGCCACAG
CCCTGGACCCAAAGAAGGGAAGCTTGGGGACAATTGCACCAATTGCAATT
GGTTTCATTGTAGGAGCCAACATCTTGGCGGGCGGGGCGTTTGATGGAGC
TTCAATGAACCCAGCAGTGTCATTCGGGCCAGCTTTGGTAAGCTGGAGCT
GGGACAACCACTGGGTCCACTGGGTCGGGCCCCTCATCGGTGGTGGGCTA
ACTGGGCTCTCCACAAATTTCTTCTTCTTAACCAGTCTCACAAGCAGCTC
CCAACACCCAATTACTAAGCTAAAAGCTTTGCACCTAGGTGAATTTTGCA
GCGGATGGTTTGTTTAAATTTTGTTTTACCCGAAGGTTTTTCCCTTTTAT
TTTCAAATTGTGTTTCAATTCAAGGGGCCGTGGACCCCGGTTCCCTCCAA
CCCTAACCTTGTCGGATTTTTGTTACACCTACTAATTGTTCATATCTTCG
CGAAGGGCTTTGATTTTTCTACCTCCCATCAAAATATTCCTTTATGCTAT
TAATAATATA
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