DY271306
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271306 vs. ExPASy Swiss-Prot
Match: CH602_CHRVO (60 kDa chaperonin 2 OS=Chromobacterium violaceum GN=groL2 PE=3 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 4.833e-11 Identity = 45/149 (30.20%), Postives = 75/149 (50.34%), Query Frame = 2 Query: 215 GADDVIQRPMLSELITNKDLNVIEE-----SFLASGARFVKEALNPICNPDEHGFKYWGVMSSAVAYRLLLAVKAKLDPKDIDVGL-RLAVDAVAEILRCRAQASTFEEISQVGTAAANGNKIIGELAAMACQRVGEHGHYIIRDNGKS 643 G + V+ R + IT ++V +E F GA+ VKE + + G V++ A+ + V A ++P D+ G+ + V V EI + +T +EI+QVG+ +AN + IGE+ A A ++VG+ G + D GKS Sbjct: 35 GRNVVLDRSFGAPTITKDGVSVAKEIELKDKFENMGAQMVKEVASKTSDVAGDGTTTATVLAQAIVQEGMKFVAAGMNPMDLKRGIDKAVVSLVGEIAKIAKPCATSKEIAQVGSISANSDSDIGEIIANAMEKVGKEGVITVED-GKS 182 HSP 2 Score: 28.4906 bits (62), Expect = 4.833e-11 Identity = 22/57 (38.60%), Postives = 31/57 (54.39%), Query Frame = 3 Query: 693 VSSYFTNQKAKD-CVLENPFFLILENMIVSQNI-----VEQAIARADSRPLLIGGED 845 +S YF N + K L+NPF L+ + I NI V + +A++ RPLLI ED Sbjct: 200 LSPYFINNQDKQIAALDNPFILLFDKKI--SNIRDLLPVLEQVAKS-GRPLLIIAED 253
BLAST of DY271306 vs. ExPASy Swiss-Prot
Match: CH60_JANMA (60 kDa chaperonin OS=Janthinobacterium sp. (strain Marseille) GN=groL PE=3 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 4.833e-11 Identity = 46/152 (30.26%), Postives = 78/152 (51.32%), Query Frame = 2 Query: 215 GADDVIQRPMLSELITNKDLNVIEESFLAS-----GARFVKEALNPICNPDEHGFKYWGVMSSAVAYRLLLAVKAKLDPKDIDVGLRLAVDAVAEILRCRAQ-ASTFEEISQVGTAAANGNKIIGELAAMACQRVGEHGHYIIRDNGKSKSE 652 G + V++R + +T ++V +E L GA+ VKE + + G V++ A+ + V A ++P D+ G+ AV A E L A+ +T +EI+QVG+ +AN + IGE A A ++VG+ G + D GKS ++ Sbjct: 35 GRNVVLERSFGAPTVTKDGVSVAKEIELKDKLQNMGAQLVKEVASRTSDNAGDGTTTATVLAQAIVREGMKYVAAGMNPMDLKRGIDKAVAATVEQLAAIAKPCTTTKEIAQVGSISANSDASIGERIAEAMEKVGKEGVITVED-GKSLND 185 HSP 2 Score: 31.187 bits (69), Expect = 4.833e-11 Identity = 24/57 (42.11%), Postives = 31/57 (54.39%), Query Frame = 3 Query: 693 VSSYFTNQKAKD-CVLENPFFLILENMIVSQNI-----VEQAIARADSRPLLIGGED 845 +S YF N K +LENPF L+ + I NI V + +A+A RPLLI ED Sbjct: 200 LSPYFINNPEKQTAILENPFILLCDKKI--SNIRDLLPVLEQVAKA-GRPLLIIAED 253
BLAST of DY271306 vs. ExPASy Swiss-Prot
Match: HSP60_SCHPO (Heat shock protein 60, mitochondrial OS=Schizosaccharomyces pombe GN=hsp60 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.244e-11 Identity = 50/155 (32.26%), Postives = 78/155 (50.32%), Query Frame = 2 Query: 215 GADDVIQRPMLSELITNKDLNV-----IEESFLASGARFVKEALNPICNPDEHGFKYWGVMSSAVAYRLLLAVKAKLDPKDIDVGLRLAVDAVAEILRC-RAQASTFEEISQVGTAAANGNKIIGELAAMACQRVGEHGHYIIRDNGKSKSESRV 661 G + +I +P S IT + V +++ F GAR V++ + G V++ A+ + V A +P D+ G++LAVD V E L+ + +T EEISQV T +ANG+ IGEL A A +RVG+ G +++ E V Sbjct: 66 GRNVLIDQPFGSPKITKDGVTVARSVSLKDKFENLGARLVQDVASKTNEVAGDGTTTATVLTRAIFSETVRNVAAGCNPMDLRRGIQLAVDNVVEFLQANKRDITTSEEISQVATISANGDTHIGELLAKAMERVGKEGVITVKEGRTISDELEV 220
BLAST of DY271306 vs. ExPASy Swiss-Prot
Match: CH602_POLNA (60 kDa chaperonin 2 OS=Polaromonas naphthalenivorans (strain CJ2) GN=groL2 PE=3 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 6.271e-11 Identity = 44/152 (28.95%), Postives = 81/152 (53.29%), Query Frame = 2 Query: 215 GADDVIQRPMLSELITNKDLNVIEESFLAS-----GARFVKEALNPICNPDEHGFKYWGVMSSAVAYRLLLAVKAKLDPKDIDVGLRLAVDAVAEILRCRAQASTF-EEISQVGTAAANGNKIIGELAAMACQRVGEHGHYIIRDNGKSKSE 652 G + V++R + +T ++V +E L GA+ VKE + + G V++ A+ + + V A ++P D+ G+ AV A+ E L+ ++A+T +EI+QVG+ +AN ++ IG++ A A +VG+ G + D +SE Sbjct: 35 GRNVVLERSFGAPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASKTSDIAGDGTTTATVLAQAIVHEGMKYVAAGMNPMDLKRGIDKAVHALVEELKKASKATTTSKEIAQVGSISANSDETIGKIIADAMDKVGKEGVITVEDGKSLESE 186 HSP 2 Score: 26.5646 bits (57), Expect = 6.271e-11 Identity = 21/57 (36.84%), Postives = 31/57 (54.39%), Query Frame = 3 Query: 693 VSSYFTNQKAKD-CVLENPFFLILENMIVSQNIVE-----QAIARADSRPLLIGGED 845 +S YF N K +L+NPF L+ + I NI + + +A+A RPLLI E+ Sbjct: 200 LSPYFINNPEKQSALLDNPFVLLYDKKI--SNIRDLLPTLEQVAKA-GRPLLIIAEE 253
BLAST of DY271306 vs. ExPASy Swiss-Prot
Match: CH60_VEREI (60 kDa chaperonin OS=Verminephrobacter eiseniae (strain EF01-2) GN=groL PE=3 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 8.138e-11 Identity = 46/152 (30.26%), Postives = 77/152 (50.66%), Query Frame = 2 Query: 215 GADDVIQRPMLSELITNKDLNVIEESFLAS-----GARFVKEALNPICNPDEHGFKYWGVMSSAVAYRLLLAVKAKLDPKDIDVGLRLAVDA-VAEILRCRAQASTFEEISQVGTAAANGNKIIGELAAMACQRVGEHGHYIIRDNGKSKSE 652 G + VI+R + +T ++V +E L GA+ VKE + + G V++ A+ V A ++P D+ G+ AV A VAE+ + +T +EI+QVG+ +AN ++ IG+L A A +VG+ G + D +SE Sbjct: 35 GRNVVIERSFGAPTVTKDGVSVAKEIELKDKLQNMGAQLVKEVASKTSDNAGDGTTTATVLAQAIVREGFKYVAAGINPMDLKRGIDKAVTALVAELKKASKPTTTSKEIAQVGSISANADETIGKLIADAMDKVGKEGVITVEDGKSLESE 186 HSP 2 Score: 26.1794 bits (56), Expect = 8.138e-11 Identity = 20/57 (35.09%), Postives = 31/57 (54.39%), Query Frame = 3 Query: 693 VSSYFTNQKAKDC-VLENPFFLILENMIVSQNIVE-----QAIARADSRPLLIGGED 845 +S YF N K +L+NPF L+ + I NI + + +A+A RPLL+ E+ Sbjct: 200 LSPYFINNPDKQAALLDNPFVLLFDKKI--SNIRDLLPTLEQVAKA-GRPLLVIAEE 253
BLAST of DY271306 vs. ExPASy Swiss-Prot
Match: CH60_DECAR (60 kDa chaperonin OS=Dechloromonas aromatica (strain RCB) GN=groL PE=3 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 8.139e-11 Identity = 44/149 (29.53%), Postives = 76/149 (51.01%), Query Frame = 2 Query: 215 GADDVIQRPMLSELITNKDLNVIEE-----SFLASGARFVKEALNPICNPDEHGFKYWGVMSSAVAYRLLLAVKAKLDPKDIDVGLRLAVDA-VAEILRCRAQASTFEEISQVGTAAANGNKIIGELAAMACQRVGEHGHYIIRDNGKS 643 G + V++R +T ++V +E F GA+ VKE + + G V++ ++ + V A ++P D+ G+ AV A +AE+ +T +EI+QVG+ +AN + IGE+ A A ++VG+ G + D GKS Sbjct: 35 GRNVVLERSFGGPTVTKDGVSVAKEIELKDKFANMGAQMVKEVASKTSDIAGDGTTTATVLAQSIVREGMKFVAAGMNPMDLKRGIDKAVVATIAELQAFSKPCTTTKEIAQVGSISANSDSDIGEIIANAMEKVGKEGVITVED-GKS 182 HSP 2 Score: 30.0314 bits (66), Expect = 8.139e-11 Identity = 24/56 (42.86%), Postives = 32/56 (57.14%), Query Frame = 3 Query: 693 VSSYFTNQKAKD-CVLENPFFLILENMIVSQN----IVEQAIARADSRPLLIGGED 845 +S YF N K +LENPF L+ + I + I+EQ +A+A RPLLI ED Sbjct: 200 LSPYFINNGDKQQALLENPFVLLFDKKISNIRDLLPILEQ-VAKA-GRPLLIIAED 253
BLAST of DY271306 vs. ExPASy Swiss-Prot
Match: CH60_BRUO2 (60 kDa chaperonin OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=groL PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 8.155e-11 Identity = 47/155 (30.32%), Postives = 82/155 (52.90%), Query Frame = 2 Query: 215 GADDVIQRPMLSELITNKDLNV-----IEESFLASGARFVKEALNPICNPDEHGFKYWGVMSSAVAYRLLLAVKAKLDPKDIDVGLRLAV-DAVAEILRCRAQASTFEEISQVGTAAANGNKIIGELAAMACQRVGEHGHYIIRDNGKSKSESRV 661 G + VI++ + IT ++V +E+ F GA+ ++E + + G V+ A+ AV A ++P D+ G+ LAV + VAE+L+ + +T EE++QVGT +ANG IG++ A A Q+VG G + + +++E V Sbjct: 35 GRNVVIEKSFGAPRITKDGVSVAKEVELEDKFENMGAQMLREVASKTNDTAGDGTTTATVLGQAIVQEGAKAVAAGMNPMDLKRGIDLAVNEVVAELLKKAKKINTSEEVAQVGTISANGEAEIGKMIAEAMQKVGNEGVITVEEAKTAETELEV 189
BLAST of DY271306 vs. ExPASy Swiss-Prot
Match: CH60_BRUME (60 kDa chaperonin OS=Brucella melitensis GN=groL PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 8.155e-11 Identity = 47/155 (30.32%), Postives = 82/155 (52.90%), Query Frame = 2 Query: 215 GADDVIQRPMLSELITNKDLNV-----IEESFLASGARFVKEALNPICNPDEHGFKYWGVMSSAVAYRLLLAVKAKLDPKDIDVGLRLAV-DAVAEILRCRAQASTFEEISQVGTAAANGNKIIGELAAMACQRVGEHGHYIIRDNGKSKSESRV 661 G + VI++ + IT ++V +E+ F GA+ ++E + + G V+ A+ AV A ++P D+ G+ LAV + VAE+L+ + +T EE++QVGT +ANG IG++ A A Q+VG G + + +++E V Sbjct: 35 GRNVVIEKSFGAPRITKDGVSVAKEVELEDKFENMGAQMLREVASKTNDTAGDGTTTATVLGQAIVQEGAKAVAAGMNPMDLKRGIDLAVNEVVAELLKKAKKINTSEEVAQVGTISANGEAEIGKMIAEAMQKVGNEGVITVEEAKTAETELEV 189
BLAST of DY271306 vs. ExPASy Swiss-Prot
Match: CH60_BRUMB (60 kDa chaperonin OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=groL PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 8.155e-11 Identity = 47/155 (30.32%), Postives = 82/155 (52.90%), Query Frame = 2 Query: 215 GADDVIQRPMLSELITNKDLNV-----IEESFLASGARFVKEALNPICNPDEHGFKYWGVMSSAVAYRLLLAVKAKLDPKDIDVGLRLAV-DAVAEILRCRAQASTFEEISQVGTAAANGNKIIGELAAMACQRVGEHGHYIIRDNGKSKSESRV 661 G + VI++ + IT ++V +E+ F GA+ ++E + + G V+ A+ AV A ++P D+ G+ LAV + VAE+L+ + +T EE++QVGT +ANG IG++ A A Q+VG G + + +++E V Sbjct: 35 GRNVVIEKSFGAPRITKDGVSVAKEVELEDKFENMGAQMLREVASKTNDTAGDGTTTATVLGQAIVQEGAKAVAAGMNPMDLKRGIDLAVNEVVAELLKKAKKINTSEEVAQVGTISANGEAEIGKMIAEAMQKVGNEGVITVEEAKTAETELEV 189
BLAST of DY271306 vs. ExPASy Swiss-Prot
Match: CH60_BRUAB (60 kDa chaperonin OS=Brucella abortus GN=groL PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 8.155e-11 Identity = 47/155 (30.32%), Postives = 82/155 (52.90%), Query Frame = 2 Query: 215 GADDVIQRPMLSELITNKDLNV-----IEESFLASGARFVKEALNPICNPDEHGFKYWGVMSSAVAYRLLLAVKAKLDPKDIDVGLRLAV-DAVAEILRCRAQASTFEEISQVGTAAANGNKIIGELAAMACQRVGEHGHYIIRDNGKSKSESRV 661 G + VI++ + IT ++V +E+ F GA+ ++E + + G V+ A+ AV A ++P D+ G+ LAV + VAE+L+ + +T EE++QVGT +ANG IG++ A A Q+VG G + + +++E V Sbjct: 35 GRNVVIEKSFGAPRITKDGVSVAKEVELEDKFENMGAQMLREVASKTNDTAGDGTTTATVLGQAIVQEGAKAVAAGMNPMDLKRGIDLAVNEVVAELLKKAKKINTSEEVAQVGTISANGEAEIGKMIAEAMQKVGNEGVITVEEAKTAETELEV 189 The following BLAST results are available for this feature:
BLAST of DY271306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271306 ID=DY271306; Name=DY271306; organism=Citrus clementina; type=EST; length=955bpback to top |