DY271323

Overview
NameDY271323
Unique NameDY271323
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1061
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271323 vs. ExPASy Swiss-Prot
Match: UAP56_CANFA (Spliceosome RNA helicase BAT1 OS=Canis familiaris GN=BAT1 PE=3 SV=1)

HSP 1 Score: 360.533 bits (924), Expect = 9.255e-99
Identity = 192/318 (60.38%), Postives = 233/318 (73.27%), Query Frame = 2
Query:  128 DSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCQKFYARSNGNFMWMNKASXXXXXXXXXH*IEWAGKKPKLDDPLEPWNLIQLLFLVKGVTQARELKSLLVKRIFPLICLPFGAGPPKKGLTRFKR 1057
            D V T A G+ +        K  YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP  GQV+ LV+CHTRELA+QI  E+ERFS Y+P++KVAVF+GG++IK  +++LK  CP IVVGTPGRILALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPVC+KF       F+                 ++   K  KL D L+     Q++  VK V +   L  LLV++ FP I +  G  P ++ L+R+++
Sbjct:   16 DEVETAAGGDGSEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGM-PQEERLSRYQQ 332          
BLAST of DY271323 vs. ExPASy Swiss-Prot
Match: UAP56_RAT (Spliceosome RNA helicase Bat1 OS=Rattus norvegicus GN=Bat1 PE=2 SV=3)

HSP 1 Score: 357.836 bits (917), Expect = 5.999e-98
Identity = 187/298 (62.75%), Postives = 226/298 (75.84%), Query Frame = 2
Query:  164 KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCQKFYARSNGNFMWMNKASXXXXXXXXXH*IEWAGKKPKLDDPLEPWNLIQLLFLVKGVTQARELKSLLVKRIFPLICLPFGAGPPKKGLTRFKR 1057
            K  YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP  GQV+ LV+CHTRELA+QI  E+ERFS Y+P++KVAVF+GG++IK  +++LK  CP IVVGTPGRILALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPVC+KF       F+                 ++   K  KL D L+     Q++  VK V +   L  LLV++ FP I +  G  P ++ L+R+++
Sbjct:   36 KGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGM-PQEERLSRYQQ 332          
BLAST of DY271323 vs. ExPASy Swiss-Prot
Match: UAP56_MOUSE (Spliceosome RNA helicase Bat1 OS=Mus musculus GN=Bat1 PE=1 SV=1)

HSP 1 Score: 357.836 bits (917), Expect = 5.999e-98
Identity = 187/298 (62.75%), Postives = 226/298 (75.84%), Query Frame = 2
Query:  164 KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCQKFYARSNGNFMWMNKASXXXXXXXXXH*IEWAGKKPKLDDPLEPWNLIQLLFLVKGVTQARELKSLLVKRIFPLICLPFGAGPPKKGLTRFKR 1057
            K  YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP  GQV+ LV+CHTRELA+QI  E+ERFS Y+P++KVAVF+GG++IK  +++LK  CP IVVGTPGRILALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPVC+KF       F+                 ++   K  KL D L+     Q++  VK V +   L  LLV++ FP I +  G  P ++ L+R+++
Sbjct:   36 KGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGM-PQEERLSRYQQ 332          
BLAST of DY271323 vs. ExPASy Swiss-Prot
Match: UAP56_CHICK (Spliceosome RNA helicase BAT1 OS=Gallus gallus GN=BAT1 PE=2 SV=1)

HSP 1 Score: 356.681 bits (914), Expect = 1.336e-97
Identity = 190/318 (59.75%), Postives = 230/318 (72.33%), Query Frame = 2
Query:  128 DSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCQKFYARSNGNFMWMNKASXXXXXXXXXH*IEWAGKKPKLDDPLEPWNLIQLLFLVKGVTQARELKSLLVKRIFPLICLPFGAGPPKKGLTRFKR 1057
            D V   A G+ +        K  YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP  GQV+ LV+CHTRELA+QI  E+ERFS Y+P +KVAVF+GG+ +K  +++LK  CP IVVGTPGRILALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPVC+KF       F+                 ++   K  KL D L+     Q++  VK V +   L  LLV++ FP I +  G  P ++ L+R+++
Sbjct:   16 DEVENAAGGDGSEAPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGLAVKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGM-PQEERLSRYQQ 332          
BLAST of DY271323 vs. ExPASy Swiss-Prot
Match: DDX39_MOUSE (ATP-dependent RNA helicase DDX39 OS=Mus musculus GN=Ddx39 PE=2 SV=1)

HSP 1 Score: 353.984 bits (907), Expect = 8.662e-97
Identity = 184/313 (58.79%), Postives = 226/313 (72.20%), Query Frame = 2
Query:  119 QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCQKFYARSNGNFMWMNKASXXXXXXXXXH*IEWAGKKPKLDDPLEPWNLIQLLFLVKGVTQARELKSLLVKRIFPLICLPFGAGPPKKGLTRFKR 1057
            QAP         +  K  YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP  GQV+ LV+CHTRELA+QI  E+ERFS Y+P +KV+VF+GG++IK  +D+LK  CP +VVGTPGRILAL R + L+L+NV+HF+LDECDKMLE LDMRRDVQEIF++TPH+KQ MMFSATLSKEIRPVC+KF       F+                 ++ + K  KL D L+     Q++  VK V +   L  LLV++ FP I +  G    ++ L+R+++
Sbjct:   20 QAPQESTPAPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEDVLKKNCPHVVVGTPGRILALVRSRSLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEER-LSRYQQ 331          
BLAST of DY271323 vs. ExPASy Swiss-Prot
Match: DDX39_HUMAN (ATP-dependent RNA helicase DDX39 OS=Homo sapiens GN=DDX39 PE=1 SV=2)

HSP 1 Score: 353.984 bits (907), Expect = 8.662e-97
Identity = 184/313 (58.79%), Postives = 226/313 (72.20%), Query Frame = 2
Query:  119 QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCQKFYARSNGNFMWMNKASXXXXXXXXXH*IEWAGKKPKLDDPLEPWNLIQLLFLVKGVTQARELKSLLVKRIFPLICLPFGAGPPKKGLTRFKR 1057
            QAP         +  K  YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP  GQVT LV+CHTRELA+QI  E+ERFS Y+P +KV+VF+GG++IK  +++LK  CP +VVGTPGRILAL R++  SLKNV+HF+LDECDKMLE LDMRRDVQEIF++TPH+KQ MMFSATLSK+IRPVC+KF       F+                 ++ + K  KL D L+     Q++  VK V +   L  LLV++ FP I +  G    ++ L+R+++
Sbjct:   20 QAPQESTPAPPKKDIKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVIIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEER-LSRYQQ 331          
BLAST of DY271323 vs. ExPASy Swiss-Prot
Match: DDX39_RAT (ATP-dependent RNA helicase DDX39 OS=Rattus norvegicus GN=Ddx39 PE=2 SV=1)

HSP 1 Score: 352.443 bits (903), Expect = 2.520e-96
Identity = 183/313 (58.47%), Postives = 225/313 (71.88%), Query Frame = 2
Query:  119 QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCQKFYARSNGNFMWMNKASXXXXXXXXXH*IEWAGKKPKLDDPLEPWNLIQLLFLVKGVTQARELKSLLVKRIFPLICLPFGAGPPKKGLTRFKR 1057
            Q P         +  K  YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP  GQV+ LV+CHTRELA+QI  E+ERFS Y+P +KV+VF+GG++IK  +D+LK  CP +VVGTPGRILAL R + L+L+NV+HF+LDECDKMLE LDMRRDVQEIF++TPH+KQ MMFSATLSKEIRPVC+KF       F+                 ++ + K  KL D L+     Q++  VK V +   L  LLV++ FP I +  G    ++ L+R+++
Sbjct:   20 QVPQESTPAPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPINGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEDVLKKNCPHVVVGTPGRILALVRSRSLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEER-LSRYQQ 331          
BLAST of DY271323 vs. ExPASy Swiss-Prot
Match: SUB2_SCHPO (ATP-dependent RNA helicase uap56 OS=Schizosaccharomyces pombe GN=uap56 PE=1 SV=3)

HSP 1 Score: 332.413 bits (851), Expect = 2.699e-90
Identity = 179/311 (57.56%), Postives = 226/311 (72.67%), Query Frame = 2
Query:  140 TKANGEAA-KKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL--KNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCQKFYARSNGNFMWMNKASXXXXXXXXXH*I--EWAGKKPKLDDPLEPWNLIQLLFLVKGVTQARELKSLLVKRIFPLICLPFGAGPPKKGLTRFK 1054
            T  NGE + KKG YVGIHS+GFRDFLLKPELLRAI DSGFEHPSEVQ  CIPQ+ILG DV+CQAKSGMGKTAVFVLSTLQQ EP  G+V+ LVLCHTRELA+QI +E+ RFS YLPD++ AVFYGG+NIK   +    K++ P IVV TPGR+ AL R+K L + +V+HF+LDECDK+LES+DMRRD+QE+F+ TP  KQVMMFSATLS EIRP+C+KF    N   ++++  +         H +  E   K  K++D L+     Q++  VK V++A EL  LL +  FP IC+  G  P ++ + R+K
Sbjct:   32 TAENGEKSDKKGSYVGIHSTGFRDFLLKPELLRAITDSGFEHPSEVQQVCIPQSILGTDVLCQAKSGMGKTAVFVLSTLQQIEPVDGEVSVLVLCHTRELAFQIKNEYARFSKYLPDVRTAVFYGGINIKQDMEAFKDKSKSPHIVVATPGRLNALVREKILKVNSVKHFVLDECDKLLESVDMRRDIQEVFRATPPQKQVMMFSATLSNEIRPICKKF--MQNPLEIYVDDETKLTLHGLQQHYVKLEEKAKNRKINDLLDSLEFNQVVIFVKSVSRANELDRLLRECNFPSICI-HGGLPQEERIKRYK 339          
BLAST of DY271323 vs. ExPASy Swiss-Prot
Match: SUB2_PICGU (ATP-dependent RNA helicase SUB2 OS=Pichia guilliermondii GN=SUB2 PE=3 SV=3)

HSP 1 Score: 327.791 bits (839), Expect = 6.648e-89
Identity = 174/316 (55.06%), Postives = 222/316 (70.25%), Query Frame = 2
Query:  116 AQAPDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCQKFYARSNGNFMWMNKASXXXXXXXXXH*IEWAGKKPKLDDPLEPWNLIQLLFLVKGVTQARELKSLLVKRIFPLICLPFGAGPPKKGLTRFK 1054
            + AP++ A  A+ +A KKG YVGIH++GFRDFLLKPELLRAI D GFEHPSEVQ  CIPQ+ILG DV+CQAKSG+GKTAVFVLSTLQQ +P PG++T LV+CHTRELAYQI +E+ RFS Y+PD+K  VFYGG+ I    + LKN+  CP IVV TPGR+ AL  +K + L NV+ F++DECDK+LE++DMRRDVQ+IF+ TPH KQVMMFSATLS+EIRPVC+KF       ++                 ++   K  KL D L+     Q++  VK  ++A EL  LLV   FP I +   A P ++ + R+K
Sbjct:   22 SNAPEAGADGADKDADKKGSYVGIHATGFRDFLLKPELLRAIGDCGFEHPSEVQQVCIPQSILGTDVLCQAKSGLGKTAVFVLSTLQQLDPVPGEITTLVICHTRELAYQIRNEYARFSKYMPDVKTEVFYGGIPIAKDIEKLKNKDTCPHIVVATPGRLHALVEEKAIRLNNVKSFVIDECDKVLEAIDMRRDVQDIFRNTPHQKQVMMFSATLSQEIRPVCKKFMQNPLEIYVDDEAKLTLHGLQQYYLKLDEKEKNRKLADLLDSLEFNQVIIFVKSTSRANELNKLLVASNFPSIAV-HSAMPQEERIARYK 336          
BLAST of DY271323 vs. ExPASy Swiss-Prot
Match: SUB2_CRYNE (ATP-dependent RNA helicase SUB2 OS=Cryptococcus neoformans GN=SUB2 PE=3 SV=1)

HSP 1 Score: 325.479 bits (833), Expect = 3.299e-88
Identity = 176/317 (55.52%), Postives = 220/317 (69.40%), Query Frame = 2
Query:  125 PDSVATKANGEAA---KKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL--KNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCQKFYARSNGNFMWMNKASXXXXXXXXXH*IEWAGKKPKLDDPLEPWNLIQLLFLVKGVTQARELKSLLVKRIFPLICLPFGAGPPKKGLTRFKR 1057
            P + A + NG+ A   KKG YVGIHS+GFRDFLLKPELLRAI D GFEHPSEVQ ECIPQAILG DV+CQAKSGMGKTAVFVL+ LQQ EP  G+V+ ++LCHTRELAYQI +EF RFS ++ +++  VFYGG  I   +++L  K +CP IVVGTPGR +AL RDK L+   V+HF+LDECDKMLE LDMRRDVQEIF+ TPH KQVMMFSATLSK+IR  C+KF       ++                 +E   K  KL+D L+     Q+   VK V +A +L +LL +  FP IC+  G    ++ ++RF++
Sbjct:   33 PPAPAAETNGDKADGDKKGSYVGIHSTGFRDFLLKPELLRAISDLGFEHPSEVQQECIPQAILGTDVLCQAKSGMGKTAVFVLAALQQIEPVDGEVSIIILCHTRELAYQIKNEFTRFSKFMTNVRTGVFYGGTPISADQEILANKEKCPHIVVGTPGRTMALVRDKKLNASKVKHFVLDECDKMLEQLDMRRDVQEIFRATPHHKQVMMFSATLSKDIRATCKKFMQSPLEIYVDDETKLTLHGLQQFYLKLEEREKNRKLNDLLDNLEFNQVCIFVKSVQRATQLDALLQECNFPSICIHSGLQQAER-ISRFQQ 348          
The following BLAST results are available for this feature:
BLAST of DY271323 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
UAP56_CANFA9.255e-9960.38Spliceosome RNA helicase BAT1 OS=Canis familiaris ... [more]
UAP56_RAT5.999e-9862.75Spliceosome RNA helicase Bat1 OS=Rattus norvegicus... [more]
UAP56_MOUSE5.999e-9862.75Spliceosome RNA helicase Bat1 OS=Mus musculus GN=B... [more]
UAP56_CHICK1.336e-9759.75Spliceosome RNA helicase BAT1 OS=Gallus gallus GN=... [more]
DDX39_MOUSE8.662e-9758.79ATP-dependent RNA helicase DDX39 OS=Mus musculus G... [more]
DDX39_HUMAN8.662e-9758.79ATP-dependent RNA helicase DDX39 OS=Homo sapiens G... [more]
DDX39_RAT2.520e-9658.47ATP-dependent RNA helicase DDX39 OS=Rattus norvegi... [more]
SUB2_SCHPO2.699e-9057.56ATP-dependent RNA helicase uap56 OS=Schizosaccharo... [more]
SUB2_PICGU6.648e-8955.06ATP-dependent RNA helicase SUB2 OS=Pichia guillier... [more]
SUB2_CRYNE3.299e-8855.52ATP-dependent RNA helicase SUB2 OS=Cryptococcus ne... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YJ16FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271323 ID=DY271323; Name=DY271323; organism=Citrus clementina; type=EST; length=1061bp
CTCTCGCCAAACTCTAACCCTAAAACCCCAACCGTTTATTCGAATACTGG
CAGGAATGGGAGAGACAAGAGACAACGAGTACGAGGATGAGCTTCTCGAC
TACGAGGAAGAAGATGCTCAAGCTCCCGATTCCGTCGCTACCAAAGCAAA
CGGCGAAGCCGCCAAGAAGGGCTATGTTGGTATACACAGTTCAGGATTCA
GAGACTTTCTTTTGAAGCCGGAACTTCTTCGTGCAATTGTGGACTCAGGA
TTTGAGCATCCTTCAGAAGTGCAACATGAATGCATACCTCAAGCGATTCT
GGGCATGGATGTTATTTGCCAAGCTAAATCAGGGATGGGGAAGACTGCTG
TGTTTGTTCTGTCAACTCTTCAGCAAACAGAGCCAAATCCAGGCCAAGTT
ACTGCACTTGTTTTATGTCACACTAGAGAGTTAGCTTATCAGATCTGCCA
TGAGTTTGAGAGGTTCAGTACTTACCTGCCTGATATCAAGGTTGCTGTCT
TTTATGGTGGAGTTAATATAAAAATTCACAAAGATTTGCTGAAAAACGAA
TGTCCCCAAATTGTTGTCGGGACTCCTGGAAGGATACTAGCTCTTGCTAG
AGATAAAGACCTCTCTTTGAAGAATGTGAGGCATTTTATCCTTGATGAAT
GCGATAAGATGCTGGAATCTCTTGACATGAGAAGAGATGTGCAAGAGATT
TTCAAGATGACTCCTCATGACAAGCAAGTAATGATGTTTTCCGCAACACT
CAGCAAGGAAATCCGCCCAGTCTGCCAGAAATTTTATGCAAGATCCAATG
GAAATTTTATGTGGATGAACAAGGCAAGTTGACTCCTTCTGGTCTTGGTC
CGCCTTCATTAAATTGAGTGGGCTGGAAAAAAACCGAAATTGGATGATCC
CCTTGAGCCTTGGAATTTAATCCAGTTGTTATTCTTGGTCAAAGGGGTTA
CCCAAGCACGGGAGTTAAAAAGTTTATTGGTAAAAAGGATTTTTCCTCTC
ATTTGCCTTCCCTTTGGGGCTGGGCCACCAAAAAAAGGGTTGACCCGGTT
CAAAAGGGTTC
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