DY271329
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271329 vs. ExPASy Swiss-Prot
Match: TCPH_DICDI (T-complex protein 1 subunit eta OS=Dictyostelium discoideum GN=cct7 PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 1.056e-31 Identity = 76/258 (29.46%), Postives = 139/258 (53.88%), Query Frame = 2 Query: 62 LDTIMHSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAMPIDANDLLGLVKSCIGTKFTSQF----GDLLADLAIDATTTVGVDLGQGLREVDIKKYIXVEKVPGGQLEDSRVLKGVMFNKDVVAPG--KMRRKIATHVLSFLILPLSTKKEK 817 + ++ P+++LK+ G +NI A A+ D +RTTLGPR M K++ + + ++NDG +++ LD+ HPAA+++++++++QD EVGDGTTSV++LAGE L A+ F+ + HP +I RA+ A E A + +++ I ++ ++ C T S+ + + +DA + ++ ++D+ I ++K GG L DS+ + G F + G + + I + L + L K EK Sbjct: 1 MSQMIRPPIVLLKEGTDTSQGLPQLISNINACCAIVDTVRTTLGPRGMDKLIYQSERQVTISNDGATVMKLLDIVHPAARTLVDIAKSQDSEVGDGTTSVVILAGEFLKAAKPFLEEGIHPQIIIRAFRSACELAKQKIQELSVDIKPENMREFLEKCASTSMNSKLIASHKQFFSKMVVDAVQLLDDNI-----DLDM---IGIKKESGGGLGDSQFIAGAAFKRTFFYAGFEQQPKHIKNPKVLCLNIELELKAEK 250
BLAST of DY271329 vs. ExPASy Swiss-Prot
Match: TCPA_ARATH (T-complex protein 1 subunit alpha OS=Arabidopsis thaliana GN=CCT1 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.354e-31 Identity = 90/266 (33.83%), Postives = 139/266 (52.26%), Query Frame = 2 Query: 113 RESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLD----TIAMPIDANDLLGLVKSCIGTKFTSQFGDLLADLAIDATTTVGVDLGQGLREVDIKKYIXVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIATHVLSFLILPLSTKK---------------EKIKQM-ADLVKEK 850 R+SG V N+ A +AV++I++T+LGP + KML+D G + +TNDG ILR L+V HPAAK ++EL+ QD EVGDGTTSV+++A E+L A + + HPT I Y A+ ++ ++ T + L+ K+ + +K S D A+L ++A +V + +G + IK I + K G DS +L G N A G M +++ ++ L L K EKI+Q AD+ KE+ Sbjct: 14 RQSGQDVRTQNVMACQAVSNIVKTSLGPVGLDKMLVDDIGDVTITNDGATILRMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMRESCKYIEEKLVTKVEKLGKVPLINCAKTSMSSKLISGDSDFFANLVVEAVLSVKMTNQRGEIKYPIKG-INILKAHGQSARDSYLLNGYALNTGRAAQG-MPLRVSPAKIACLDFNLQKTKMQLGVQVVVNDPRELEKIRQREADMTKER 277
BLAST of DY271329 vs. ExPASy Swiss-Prot
Match: TCPA_YEAST (T-complex protein 1 subunit alpha OS=Saccharomyces cerevisiae GN=TCP1 PE=1 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 5.243e-31 Identity = 83/269 (30.86%), Postives = 141/269 (52.42%), Query Frame = 2 Query: 119 SGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAV----AVLDTIAMPIDANDLLGLVKSCIGTKFTSQFGDLLADLAIDATTTVGVDLGQGLREVDIKKYIXVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIATHVLSFLILPLSTKKEKI----------KQMADLVKEKNWGIRLKKKKE 883 SG + + N+ A+ AVA++++++LGP + KML+D G VTNDG IL LDV HPA K ++EL++ QD E+GDGTTSV+++A E+L A E + HPT I + AL +A+ VL T + L+ + K+ + +K D +++ +DA V +G + +K + V K G +S ++ G N VA M ++IA + L L+ +K ++ + + ++++ GI L++ K+ Sbjct: 21 SGDDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQHPAGKILVELAQQQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTSVDTLGKETLINIAKTSMSSKIIGADSDFFSNMVVDALLAVKTQNSKGEIKYPVKA-VNVLKAHGKSATESLLVPGYALN-CTVASQAMPKRIAGGNVKIACLDLNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKK 287
BLAST of DY271329 vs. ExPASy Swiss-Prot
Match: TCPA_CAEEL (T-complex protein 1 subunit alpha OS=Caenorhabditis elegans GN=cct-1 PE=2 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 6.848e-31 Identity = 76/214 (35.51%), Postives = 123/214 (57.48%), Query Frame = 2 Query: 110 KRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVA-VLDTIAMPIDA---NDLLGLVKSCIGTKFTSQFGDLLADLAIDATTTVGVDLGQGLREVDIKKYIXVEKVPGGQLEDSRVLKGVMFNKDVVA 739 KR +G + N+ A+ A+A+I++++LGP + KML+D G ++VTNDG IL++L+V HPA K ++EL++ QDEEVGDGTTSV+++A E+L A+E + + HPT I Y A ++AV + + I+ D+ ++ K+ + +K D +L +DA V V+ G I + V K G +S ++KG N V + Sbjct: 14 KRTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKYISENISFTSDSIGRQSVVNAAKTSMSSKIIGPDADFFGELVVDAAEAVRVE-NNGKVTYPINA-VNVLKAHGKSARESVLVKGYALNCTVAS 225
BLAST of DY271329 vs. ExPASy Swiss-Prot
Match: TCPA_SCHMA (T-complex protein 1 subunit alpha OS=Schistosoma mansoni GN=TCP-1A PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.526e-30 Identity = 83/242 (34.30%), Postives = 131/242 (54.13%), Query Frame = 2 Query: 110 KRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAMPIDAN-----DLLGLVKSCIGTKFTSQFGDLLADLAIDATTTVGVDLGQGLREVDIKKYIXVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIATHVLSFLILPLSTKKEKI 820 +R SG V N+ A+ + A+ ++T+LGP + KML+D G + +TNDG IL+ LDV HPAAK +++L++ QDEEVGDGTTSV++LA +L A+E I++ HPT + Y A +A + M D N L+ + ++ + +K + D+ + +A+DA V V G IK + + K G + +S ++ G N A +M R I ++FL L K K+ Sbjct: 7 ERTSGESVRKQNVLAACSFANFVKTSLGPVGLDKMLVDDVGDVTITNDGATILKLLDVEHPAAKILVQLAQLQDEEVGDGTTSVVILAAALLKNADELISRFVHPTTVINGYRLACREACKYIQE-HMAYDVNKLGKAGLINVARTAMSSKLINLDADMFSQMAVDALMAVEVSGGPKGPVYPIKA-VNILKAHGRSMSESMLIDGYALN-CTAASQQMPRIIKKAKIAFLDFSLQKVKMKL 245
BLAST of DY271329 vs. ExPASy Swiss-Prot
Match: TCPG_PIG (T-complex protein 1 subunit gamma (Fragment) OS=Sus scrofa GN=CCT3 PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.992e-30 Identity = 66/81 (81.48%), Postives = 74/81 (91.36%), Query Frame = 2 Query: 152 ASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVA 394 A+K +ADIIRT LGP+SM+KMLLD GGIV+TNDGNAILRE+ V HPAAKSMIE+SRTQDEEVGDGTTSVI+LAGEML VA Sbjct: 2 AAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVA 82
BLAST of DY271329 vs. ExPASy Swiss-Prot
Match: TCPA_PALPA (T-complex protein 1 subunit alpha OS=Paleosuchus palpebrosus GN=TCP1 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.992e-30 Identity = 83/254 (32.68%), Postives = 137/254 (53.94%), Query Frame = 2 Query: 74 MHSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAM----PIDANDLLGLVKSCIGTKFTSQFGDLLADLAIDATTTVGVDLGQGLREVDIKKYIXVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIATHVLSFLILPLSTKKEKIK 823 + P+ VL + R SG V + N+ A+ +A+I++++LGP + KML+D G + +TNDG IL+ L+V HPAAK + EL+ QD+EVGDGTTSV+++A E+L ++E + + HPT I Y A ++AV ++ + + + L+ K+ + +K GD A + +DA + V +G I I V K G ++S ++ G N V + G +R + + L S +K K+K Sbjct: 4 LEGPLAVLGE---RSSGDTVRNQNVTAAATIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELAELQDKEVGDGTTSVVIIAAELLKNSDELVKQKIHPTSIIGGYRLACKEAVRYINENLIINTDELGRDCLINSAKTSMSSKIIGIDGDFFASMVVDAASAVKYTDQKGQARYPINS-INVLKAHGRSQKESILVNGYALNCVVGSQGMTKRIVNAKI---ACLDFSLQKTKMK 250
BLAST of DY271329 vs. ExPASy Swiss-Prot
Match: TCPA_MONDO (T-complex protein 1 subunit alpha OS=Monodelphis domestica GN=TCP1 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 4.439e-30 Identity = 78/242 (32.23%), Postives = 132/242 (54.55%), Query Frame = 2 Query: 110 KRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAM----PIDANDLLGLVKSCIGTKFTSQFGDLLADLAIDATTTVGVDLGQGLREVDIKKYIXVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIATHVLSFLILPLSTKKEKIK 823 +R +G + N+ A+ ++A+I++++LGP + KML+D G + +TNDG IL+ L+V HPAAK + EL+ QD+EVGDGTTSV+++A E+L A+E + + HPT I Y A ++AV ++ + + + L+ K+ + +K GD A++ +DA V +G + I V K G ++S ++ G N V + G +R + + L S +K K+K Sbjct: 10 ERTTGESIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSIIGGYRLACKEAVRYINENLIINTDELGKDCLINAAKTSMSSKIIGIDGDFFANMVVDAVLAVKYTDVKGQPRYPVNS-INVLKAHGRSQKESMLINGYALNCVVASQGMPKRIVNAKI---ACLDFSLQKTKMK 247
BLAST of DY271329 vs. ExPASy Swiss-Prot
Match: TCPA_RAT (T-complex protein 1 subunit alpha OS=Rattus norvegicus GN=Tcp1 PE=1 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 7.571e-30 Identity = 79/254 (31.10%), Postives = 136/254 (53.54%), Query Frame = 2 Query: 74 MHSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAM----PIDANDLLGLVKSCIGTKFTSQFGDLLADLAIDATTTVGVDLGQGLREVDIKKYIXVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIATHVLSFLILPLSTKKEKIK 823 M P+ V D R +G + N+ A+ ++A+I++++LGP + KML+D G + +TNDG IL+ L+V HPAAK + EL+ QD+EVGDGTTSV+++A E+L A+E + + HPT + Y A ++AV ++ + + + L+ K+ + +K GD A++ +DA V +G + + + K G +S ++ G N V + G ++R + + L S +K K+K Sbjct: 1 MEGPLSVFGD---RSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYINENLIINTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAVKYTDIRGQPRYPVNS-VNILKAHGRSQIESMLINGYALNCVVGSQGMLKRIVNAKI---ACLDFSLQKTKMK 247
BLAST of DY271329 vs. ExPASy Swiss-Prot
Match: TCPA_BOVIN (T-complex protein 1 subunit alpha OS=Bos taurus GN=TCP1 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 9.888e-30 Identity = 83/256 (32.42%), Postives = 136/256 (53.12%), Query Frame = 2 Query: 74 MHSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAV------AVLDTIAMPIDANDLLGLVKSCIGTKFTSQFGDLLADLAIDATTTVGVDLGQGLREVDIKKYIXVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIATHVLSFLILPLSTKKEKIK 823 M P+ V D R +G + N+ A+ ++A+I++++LGP + KML+D G + +TNDG IL+ L+V HPAAK + EL+ QD+EVGDGTTSV+++A E+L A+E + + HPT + Y A ++AV +++T + D L+ K+ + +K GD A+L +DA + +G + I V K G +S ++ G N V + G +R + + L S +K K+K Sbjct: 1 MEGPLSVFGD---RSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTDELGRDC--LINAAKTSMSSKVIGINGDFFANLVVDAVLAIKYTDIRGQPRYPVNS-INVLKAHGRSQMESMLINGYALNCVVGSQGMPKRIVNAKI---ACLDFSLQKTKMK 247 The following BLAST results are available for this feature:
BLAST of DY271329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 179
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271329 ID=DY271329; Name=DY271329; organism=Citrus clementina; type=EST; length=935bpback to top |