DY271334

Overview
NameDY271334
Unique NameDY271334
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length951
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271334 vs. ExPASy Swiss-Prot
Match: DYRK2_DROME (Dual specificity tyrosine-phosphorylation-regulated kinase 2 OS=Drosophila melanogaster GN=smi35A PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.605e-13
Identity = 39/137 (28.47%), Postives = 74/137 (54.01%), Query Frame = 3
Query:  384 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKTWTKLIPISPAKTAYRSFPNDLVRELGKTLLESVTFM 791
            DD +G+Y     +++  RY IL  +G+G+FGQV+   D++    VAIKI+R+  ++   A++E+++L  L   D  G+   + + ++  +R H+CI FE     L  +   K  Y  F   L+R    ++++ +  +
Sbjct:  180 DDDNGNYKIIEHDHIAFRYEILEVIGKGSFGQVIRALDHKTNTHVAIKIIRNKKRFLNQAVVELNILDELREKDADGSHNVIHMLDYTYFRKHLCITFELMSLNLYELI-KKNNYNGFSMSLIRRFCNSIVKCLRLL 315          
BLAST of DY271334 vs. ExPASy Swiss-Prot
Match: DYRK2_CHICK (Dual specificity tyrosine-phosphorylation-regulated kinase 2 OS=Gallus gallus GN=DYRK2 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.127e-12
Identity = 40/132 (30.30%), Postives = 73/132 (55.30%), Query Frame = 3
Query:  384 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD-IGGTRCVQIRNWFDYRNHICIVFEKTWTKLIPISPAKTAYRSFPNDLVRELGKTLLE 776
            DD  G Y+    +++  RY +L  +G+G+FGQVV+ +D++  + VA+K+VR+  ++   A  EI +L+ L + D       + +   F +R+HIC+ FE     L  +   K  ++ F   LVR+   ++L+
Sbjct:  129 DDDQGSYIQVPHDHIAYRYEVLKVIGKGSFGQVVKAYDHKMHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNNMNVIHMLENFTFRSHICMTFELLSMNLYELI-KKNKFQGFSLPLVRKFAHSILQ 259          
BLAST of DY271334 vs. ExPASy Swiss-Prot
Match: MBK1_CAEEL (Dual specificity tyrosine-phosphorylation-regulated kinase mbk-1 OS=Caenorhabditis elegans GN=mbk-1 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.471e-12
Identity = 50/137 (36.50%), Postives = 75/137 (54.74%), Query Frame = 3
Query:  384 DDKDGHYVFAIGENLTPRYRILSK--MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKTWTKLIPISPAKTAYRSFPNDLVR----ELGKTLL 773
            DD++  Y+   GE    RY ILS   +G+G+FGQV + +D   KE VAIKI+++   + + A IEI +L+    HD       V ++  F +R H+C+VFE     L  +    T++R    +L R    +LGKTLL
Sbjct:  308 DDQNYDYILKNGEIFDKRYVILSDTPVGKGSFGQVTKAYDTLNKEEVAIKIIKNKKTFFDQAQIEIHLLELTNAHDKDNKYNIVTLKGHFVHRAHLCLVFELLSYNLYDLL-KNTSFRGVSLNLARKFAQQLGKTLL 443          
BLAST of DY271334 vs. ExPASy Swiss-Prot
Match: DYRK2_DICDI (Probable serine/threonine-protein kinase dyrk2 OS=Dictyostelium discoideum GN=dyrk2 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.471e-12
Identity = 47/158 (29.75%), Postives = 83/158 (52.53%), Query Frame = 3
Query:  384 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKTWTKLIPISPAKTAYRSFPNDLVRELGKTLLESVTFMPDLPLKTHLP*TQKKFLLVSP 854
            D+  G Y     +++  R+ I+S +G+G+F QVV+ +D +  E+VA+KI+R+  ++   A+ EI +L+ L  +D   T   V + N+F +RNH+ + FE     L         ++ +  +LVR  G  +L S+ F+    +  H     +  LL SP
Sbjct:  587 DNDIGEYKVVERDHIAYRFEIVSILGQGSFCQVVKGYDYKTGEMVALKILRNQKRFHNQALTEIKILEYLKTNDPNSTASIVHLNNYFYFRNHLILTFELLSMNLYDFLKV-NHFQGYNLNLVRRFGAQILTSLRFLSKRNI-IHADLKPENILLKSP 742          
BLAST of DY271334 vs. ExPASy Swiss-Prot
Match: MBK1_CAEBR (Dual specificity tyrosine-phosphorylation-regulated kinase mbk-1 OS=Caenorhabditis briggsae GN=mbk-1 PE=3 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 3.278e-12
Identity = 50/137 (36.50%), Postives = 74/137 (54.01%), Query Frame = 3
Query:  384 DDKDGHYVFAIGENLTPRYRILSK--MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKTWTKLIPISPAKTAYRSFPNDLVR----ELGKTLL 773
            DD++  Y+   GE    RY ILS   +G+G+FGQV + +D   KE VAIKI+++   + + A IEI +L+    HD       V ++  F +R H+C+VFE     L  +    T +R    +L R    +LGKTLL
Sbjct:  347 DDQNYDYILKNGEIFDKRYVILSDTPVGKGSFGQVTKAYDTVTKEEVAIKIIKNKKTFFDQAQIEIHLLELTNAHDKDNKYNIVTLKGHFVHRAHLCLVFELLSYNLYDLL-KNTNFRGVSLNLARKFAQQLGKTLL 482          
BLAST of DY271334 vs. ExPASy Swiss-Prot
Match: HIPK1_RAT (Homeodomain-interacting protein kinase 1 OS=Rattus norvegicus GN=Hipk1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.627e-11
Identity = 32/85 (37.65%), Postives = 50/85 (58.82%), Query Frame = 3
Query:  423 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFE 677
            ++T  Y +L  +G GTFGQV +C+    KE+VAIKI+++   Y     IE+ +L RL+  +      V+    F ++NH C+VFE
Sbjct:  185 SMTNSYEVLEFLGRGTFGQVAKCWKRSTKEIVAIKILKNHPSYARQGQIEVSILSRLSSENADEYNFVRSYECFQHKNHTCLVFE 269          
BLAST of DY271334 vs. ExPASy Swiss-Prot
Match: HIPK1_MOUSE (Homeodomain-interacting protein kinase 1 OS=Mus musculus GN=Hipk1 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.627e-11
Identity = 32/85 (37.65%), Postives = 50/85 (58.82%), Query Frame = 3
Query:  423 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFE 677
            ++T  Y +L  +G GTFGQV +C+    KE+VAIKI+++   Y     IE+ +L RL+  +      V+    F ++NH C+VFE
Sbjct:  185 SMTNSYEVLEFLGRGTFGQVAKCWKRSTKEIVAIKILKNHPSYARQGQIEVSILSRLSSENADEYNFVRSYECFQHKNHTCLVFE 269          
BLAST of DY271334 vs. ExPASy Swiss-Prot
Match: HIPK1_HUMAN (Homeodomain-interacting protein kinase 1 OS=Homo sapiens GN=HIPK1 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.627e-11
Identity = 32/85 (37.65%), Postives = 50/85 (58.82%), Query Frame = 3
Query:  423 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFE 677
            ++T  Y +L  +G GTFGQV +C+    KE+VAIKI+++   Y     IE+ +L RL+  +      V+    F ++NH C+VFE
Sbjct:  185 SMTNSYEVLEFLGRGTFGQVAKCWKRSTKEIVAIKILKNHPSYARQGQIEVSILSRLSSENADEYNFVRSYECFQHKNHTCLVFE 269          
BLAST of DY271334 vs. ExPASy Swiss-Prot
Match: HIPK3_HUMAN (Homeodomain-interacting protein kinase 3 OS=Homo sapiens GN=HIPK3 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.624e-11
Identity = 45/150 (30.00%), Postives = 75/150 (50.00%), Query Frame = 3
Query:  438 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKTWTKLIPISPAKTAYRSFPNDLVRELGKTLLESVTFMPDLPLKTHLP*TQKKFLLVSPE*VKVP-RIKI 884
            Y +L  +G GTFGQVV+C+     E+VAIKI+++   Y     IE+ +L RL+  +      V+    F +RNH C+VFE     L      +  +   P  ++R + + +  ++  +  L L  H     +  +LV P  V+ P R+K+
Sbjct:  197 YEVLDFLGRGTFGQVVKCWKRGTNEIVAIKILKNHPSYARQGQIEVSILARLSTENADEYNFVRAYECFQHRNHTCLVFEMLEQNLYDFL-KQNKFSPLPLKVIRPILQQVATALKKLKSLGL-IHADLKPENIMLVDP--VRQPYRVKV 342          
BLAST of DY271334 vs. ExPASy Swiss-Prot
Match: HIPK2_MOUSE (Homeodomain-interacting protein kinase 2 OS=Mus musculus GN=Hipk2 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.624e-11
Identity = 32/85 (37.65%), Postives = 49/85 (57.65%), Query Frame = 3
Query:  423 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFE 677
            ++T  Y +L  +G GTFGQVV+C+     E+VAIKI+++   Y     IE+ +L RL+         V+    F ++NH C+VFE
Sbjct:  194 SMTNTYEVLEFLGRGTFGQVVKCWKRGTNEIVAIKILKNHPSYARQGQIEVSILARLSTESADDYNFVRAYECFQHKNHTCLVFE 278          
The following BLAST results are available for this feature:
BLAST of DY271334 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
DYRK2_DROME6.605e-1328.47Dual specificity tyrosine-phosphorylation-regulate... [more]
DYRK2_CHICK1.127e-1230.30Dual specificity tyrosine-phosphorylation-regulate... [more]
MBK1_CAEEL1.471e-1236.50Dual specificity tyrosine-phosphorylation-regulate... [more]
DYRK2_DICDI1.471e-1229.75Probable serine/threonine-protein kinase dyrk2 OS=... [more]
MBK1_CAEBR3.278e-1236.50Dual specificity tyrosine-phosphorylation-regulate... [more]
HIPK1_RAT1.627e-1137.65Homeodomain-interacting protein kinase 1 OS=Rattus... [more]
HIPK1_MOUSE1.627e-1137.65Homeodomain-interacting protein kinase 1 OS=Mus mu... [more]
HIPK1_HUMAN1.627e-1137.65Homeodomain-interacting protein kinase 1 OS=Homo s... [more]
HIPK3_HUMAN3.624e-1130.00Homeodomain-interacting protein kinase 3 OS=Homo s... [more]
HIPK2_MOUSE3.624e-1137.65Homeodomain-interacting protein kinase 2 OS=Mus mu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YK05FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271334 ID=DY271334; Name=DY271334; organism=Citrus clementina; type=EST; length=951bp
GATCAATCCCCTTTTAGGGTTTCCAACACTGAAAATCATTTCTTCAAAAT
TTCCTTAATTTTTTGCTCTCAATTTTTTTTAAAGCATTATGATTCAAATT
GAGCTTAATCCATGGCTCTGCTAGATTTTTTGAATTGAAAATTTAAACAA
TAAAAGAAATGGAAACGCAGAGAATTATAGAATTTCCGCATAAAAACATG
GACAAGCGTCCCAGAAAACGACCCCGTTTAACGTGGGACGTGCCGCCTCC
TCTTCCTCCTCCCAAGGTTCTTCCGGCTCTGTATTGTGTTCAGGAGTTTG
GGAATGGAGGAATGCCCAATTATGCCTGTTCATCCATGTTTTATGGTGCG
ATTCCTCGCACTGGATCACCTCCTTGGAGACCTGATGATAAAGACGGACA
TTATGTTTTTGCCATCGGAGAAAATTTAACTCCTCGCTACAGGATTCTCA
GCAAAATGGGTGAAGGGACATTTGGGCAAGTCGTGGAATGTTTTGACAAT
GAGAAGAAGGAACTTGTGGCAATCAAAATTGTTCGCTCTATAAACAAGTA
TCGTGAAGCAGCCATGATCGAAATTGATGTTCTACAGAGGCTTGCCAGGC
ATGACATTGGTGGCACCCGTTGTGTGCAAATACGGAATTGGTTTGACTAT
CGTAATCATATTTGTATTGTATTTGAAAAAACTTGGACCAAGCTTATACC
AATTTCCCCCGCAAAAACAGCTTATCGTTCATTTCCCAATGATCTGGTTC
GGGAGCTTGGCAAAACACTATTGGAGTCTGTAACATTTATGCCTGATTTA
CCTCTTAAAACACACCTGCCTTGAACCCAAAAAAAATTTCTTCTTGTTTC
CCCCGAATAGGTTAAAGTTCCCCGAATAAAAATTTCTCATCCCAACCGCC
AAAGGAGGGTTCCCAATTTCAAAGAATCCTTCCAAAGTCAATTGCAATTA
A
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